RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C MET16P18408 261 aaPredicted RBP4.02□□□□□ -1.77
VHS3YOR054C CCA1P21269 546 aa4.02□□□□□ -1.77
VHS3YOR054C NDI1P32340 513 aa4.02□□□□□ -1.77
VHS3YOR054C PET127P32606 800 aa4.02□□□□□ -1.77
VHS3YOR054C TOM20P35180 183 aa4.02□□□□□ -1.77
VHS3YOR054C JEN1P36035 616 aa4.02□□□□□ -1.77
VHS3YOR054C SKG1P36169 355 aa4.02□□□□□ -1.77
VHS3YOR054C STV1P37296 890 aa4.02□□□□□ -1.77
VHS3YOR054C COS111P38308 924 aa4.02□□□□□ -1.77
VHS3YOR054C PHO89P38361 574 aa4.02□□□□□ -1.77
VHS3YOR054C MLH1P38920 769 aa4.02□□□□□ -1.77
VHS3YOR054C FHL1P39521 936 aa4.02□□□□□ -1.77
VHS3YOR054C YER184CP39961 794 aa4.02□□□□□ -1.77
VHS3YOR054C AVT2P39981 480 aa4.02□□□□□ -1.77
VHS3YOR054C THO1P40040 218 aaKnown RBP4.02□□□□□ -1.77
VHS3YOR054C CIN1P40987 1014 aa4.02□□□□□ -1.77
VHS3YOR054C RRN7P40992 514 aa4.02□□□□□ -1.77
VHS3YOR054C SER2P42941 309 aa4.02□□□□□ -1.77
VHS3YOR054C RGD2P43556 714 aa4.02□□□□□ -1.77
VHS3YOR054C BST1P43571 1029 aa4.02□□□□□ -1.77
VHS3YOR054C CCT8P47079 568 aaKnown RBP4.02□□□□□ -1.77
VHS3YOR054C CPR7P47103 393 aa4.02□□□□□ -1.77
VHS3YOR054C PRP24P49960 444 aaKnown RBP4.02□□□□□ -1.77
VHS3YOR054C YML6P51998 286 aa4.02□□□□□ -1.77
VHS3YOR054C PPT1P53043 513 aa4.02□□□□□ -1.77
VHS3YOR054C MNT2P53059 558 aa4.02□□□□□ -1.77
VHS3YOR054C SPC98P53540 846 aa4.02□□□□□ -1.77
VHS3YOR054C NOG2P53742 486 aaKnown RBP4.02□□□□□ -1.77
VHS3YOR054C CAF120P53836 1060 aa4.02□□□□□ -1.77
VHS3YOR054C NPL3Q01560 414 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
VHS3YOR054C ENA2Q01896 1091 aa4.02□□□□□ -1.77
VHS3YOR054C TRM82Q03774 444 aa4.02□□□□□ -1.77
VHS3YOR054C RNH1Q04740 348 aa4.02□□□□□ -1.77
VHS3YOR054C MFB1Q04922 465 aa4.02□□□□□ -1.77
VHS3YOR054C SPH1Q06160 661 aa4.02□□□□□ -1.77
VHS3YOR054C HDA3Q06623 655 aa4.02□□□□□ -1.77
VHS3YOR054C YDL129WQ07555 291 aa4.02□□□□□ -1.77
VHS3YOR054C GSH2Q08220 491 aa4.02□□□□□ -1.77
VHS3YOR054C MUM3Q08750 479 aa4.02□□□□□ -1.77
VHS3YOR054C HAL9Q12180 1030 aa4.02□□□□□ -1.77
VHS3YOR054C DCN1Q12395 269 aa4.02□□□□□ -1.77
VHS3YOR054C HMS1Q12398 434 aa4.02□□□□□ -1.77
VHS3YOR054C ENA5Q12691 1091 aa4.02□□□□□ -1.77
VHS3YOR054C FLO11P08640 1367 aa4.02□□□□□ -1.77
VHS3YOR054C CAR1P00812 333 aaKnown RBP4.02□□□□□ -1.77
VHS3YOR054C PAB1P04147 577 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
VHS3YOR054C RAD7P06779 565 aa4.02□□□□□ -1.77
VHS3YOR054C SPE1P08432 466 aa4.02□□□□□ -1.77
VHS3YOR054C FBP1P09201 348 aa4.02□□□□□ -1.77
VHS3YOR054C RPL3P14126 387 aaKnown RBP4.02□□□□□ -1.77
VHS3YOR054C FRS1P15624 595 aaKnown RBP4.02□□□□□ -1.77
VHS3YOR054C FPS1P23900 669 aa4.02□□□□□ -1.77
VHS3YOR054C URA7P28274 579 aaKnown RBP4.02□□□□□ -1.77
VHS3YOR054C CDC13P32797 924 aaKnown RBP4.02□□□□□ -1.77
VHS3YOR054C MKS1P34072 584 aa4.02□□□□□ -1.77
VHS3YOR054C LST4P34239 828 aa4.02□□□□□ -1.77
VHS3YOR054C YBR056WP38081 501 aa4.02□□□□□ -1.77
VHS3YOR054C SIF2P38262 535 aa4.02□□□□□ -1.77
VHS3YOR054C PCA1P38360 1216 aa4.02□□□□□ -1.77
VHS3YOR054C RRP4P38792 359 aaKnown RBP4.02□□□□□ -1.77
VHS3YOR054C YHR131CP38835 850 aa4.02□□□□□ -1.77
VHS3YOR054C PIG2P40187 538 aa4.02□□□□□ -1.77
VHS3YOR054C ERG10P41338 398 aaKnown RBP4.02□□□□□ -1.77
VHS3YOR054C CIT3P43635 486 aa4.02□□□□□ -1.77
VHS3YOR054C SPT20P50875 604 aa4.02□□□□□ -1.77
VHS3YOR054C UBC12P52491 188 aa4.02□□□□□ -1.77
VHS3YOR054C GUP1P53154 560 aa4.02□□□□□ -1.77
VHS3YOR054C DSE4P53753 1117 aa4.02□□□□□ -1.77
VHS3YOR054C YNL033WP53964 284 aa4.02□□□□□ -1.77
VHS3YOR054C YNL019CP53975 284 aa4.02□□□□□ -1.77
VHS3YOR054C YVH1Q02256 364 aaKnown RBP4.02□□□□□ -1.77
VHS3YOR054C YPL107WQ02873 248 aa4.02□□□□□ -1.77
VHS3YOR054C SNU56Q03782 492 aaKnown RBP4.02□□□□□ -1.77
VHS3YOR054C SPR28Q04921 423 aa4.02□□□□□ -1.77
VHS3YOR054C CRN1Q06440 651 aa4.02□□□□□ -1.77
VHS3YOR054C YDL057WQ07379 328 aa4.02□□□□□ -1.77
VHS3YOR054C NDE2Q07500 545 aa4.02□□□□□ -1.77
VHS3YOR054C YPD1Q07688 167 aa4.02□□□□□ -1.77
VHS3YOR054C FRE5Q08908 694 aa4.02□□□□□ -1.77
VHS3YOR054C APC9Q12107 265 aa4.02□□□□□ -1.77
VHS3YOR054C MED1Q12321 566 aa4.02□□□□□ -1.77
VHS3YOR054C LDB19Q12502 818 aa4.02□□□□□ -1.77
VHS3YOR054C SET6Q12529 373 aa4.02□□□□□ -1.77
VHS3YOR054C MOT1P32333 1867 aa4.02□□□□□ -1.77
VHS3YOR054C FKS1P38631 1876 aaKnown RBP4.02□□□□□ -1.77
VHS3YOR054C CBP2P03874 630 aaPredicted RBP4.01□□□□□ -1.77
VHS3YOR054C TPK1P06244 397 aa4.01□□□□□ -1.77
VHS3YOR054C BAR1P12630 587 aa4.01□□□□□ -1.77
VHS3YOR054C LAT1P12695 482 aaKnown RBP4.01□□□□□ -1.77
VHS3YOR054C EST1P17214 699 aaPredicted RBP4.01□□□□□ -1.77
VHS3YOR054C AAC3P18238 307 aa4.01□□□□□ -1.77
VHS3YOR054C PRP28P23394 588 aa4.01□□□□□ -1.77
VHS3YOR054C ATP7P30902 174 aa4.01□□□□□ -1.77
VHS3YOR054C RNP1P32385 249 aa4.01□□□□□ -1.77
VHS3YOR054C PRP21P32524 280 aaPredicted RBP4.01□□□□□ -1.77
VHS3YOR054C VAM7P32912 316 aa4.01□□□□□ -1.77
VHS3YOR054C VPS17P32913 551 aa4.01□□□□□ -1.77
VHS3YOR054C MDL2P33311 773 aa4.01□□□□□ -1.77
VHS3YOR054C MRPL3P36516 390 aa4.01□□□□□ -1.77
VHS3YOR054C APM3P38153 483 aa4.01□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms