RNA–Protein interactions for RNA: YOR006C

TSR3, Transcript of Protein required for 20S pre-rRNA processing, yeast

Gene TSR3, Length 942 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR3	YOR006C	VHC1	P38329	1120 aa		6.27	□□□□□ -1.41
TSR3	YOR006C	MMS21	P38632	267 aa		6.27	□□□□□ -1.41
TSR3	YOR006C	LRP1	P38801	184 aa	Known RBP	6.27	□□□□□ -1.41
TSR3	YOR006C	CCT4	P39078	528 aa	Known RBP	6.27	□□□□□ -1.41
TSR3	YOR006C	BUD13	P46947	266 aa	Predicted RBP	6.27	□□□□□ -1.41
TSR3	YOR006C	YJL163C	P46996	555 aa		6.27	□□□□□ -1.41
TSR3	YOR006C	STR3	P53101	465 aa	Known RBP	6.27	□□□□□ -1.41
TSR3	YOR006C	YPR003C	P53394	754 aa		6.27	□□□□□ -1.41
TSR3	YOR006C	CPR6	P53691	371 aa	Known RBP	6.27	□□□□□ -1.41
TSR3	YOR006C	TEX1	P53851	422 aa	Known RBP	6.27	□□□□□ -1.41
TSR3	YOR006C	TEP1	P53916	434 aa		6.27	□□□□□ -1.41
TSR3	YOR006C	MET14	Q02196	202 aa		6.27	□□□□□ -1.41
TSR3	YOR006C	UTP6	Q02354	440 aa	Known RBP	6.27	□□□□□ -1.41
TSR3	YOR006C	URH1	Q04179	340 aa		6.27	□□□□□ -1.41
TSR3	YOR006C	ARP9	Q05123	467 aa		6.27	□□□□□ -1.41
TSR3	YOR006C	HEL2	Q05580	639 aa	Known RBP	6.27	□□□□□ -1.41
TSR3	YOR006C	ENT2	Q05785	613 aa		6.27	□□□□□ -1.41
TSR3	YOR006C	ACF2	Q12168	779 aa		6.27	□□□□□ -1.41
TSR3	YOR006C	LDB17	Q12342	491 aa		6.27	□□□□□ -1.41
TSR3	YOR006C	AVL9	Q12500	764 aa		6.27	□□□□□ -1.41
TSR3	YOR006C	SPT15	P13393	240 aa	Known RBP	6.26	□□□□□ -1.41
TSR3	YOR006C	SPO16	P17122	198 aa		6.26	□□□□□ -1.41
TSR3	YOR006C	YSP3	P25036	478 aa		6.26	□□□□□ -1.41
TSR3	YOR006C	HEM12	P32347	362 aa	Predicted RBP	6.26	□□□□□ -1.41
TSR3	YOR006C	CNS1	P33313	385 aa		6.26	□□□□□ -1.41
TSR3	YOR006C	PMT1	P33775	817 aa		6.26	□□□□□ -1.41
TSR3	YOR006C	TFC3	P34111	1160 aa		6.26	□□□□□ -1.41
TSR3	YOR006C	PEX5	P35056	612 aa		6.26	□□□□□ -1.41
TSR3	YOR006C	OAR1	P35731	278 aa		6.26	□□□□□ -1.41
TSR3	YOR006C	SCC4	P40090	624 aa		6.26	□□□□□ -1.41
TSR3	YOR006C	YNL143C	P53908	130 aa		6.26	□□□□□ -1.41
TSR3	YOR006C	EFM6	P53970	246 aa		6.26	□□□□□ -1.41
TSR3	YOR006C	REC102	Q02721	264 aa		6.26	□□□□□ -1.41
TSR3	YOR006C	CTK1	Q03957	528 aa	Known RBP	6.26	□□□□□ -1.41
TSR3	YOR006C	VTI1	Q04338	217 aa		6.26	□□□□□ -1.41
TSR3	YOR006C	RPN8	Q08723	338 aa	Known RBP	6.26	□□□□□ -1.41
TSR3	YOR006C	YOR338W	Q99326	363 aa		6.26	□□□□□ -1.41
TSR3	YOR006C	COX3	P00420	269 aa		6.25	□□□□□ -1.41
TSR3	YOR006C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	6.25	□□□□□ -1.41	not detected
TSR3	YOR006C	TSR4	P25040	408 aa		6.25	□□□□□ -1.41
TSR3	YOR006C	MGT1	P26188	188 aa		6.25	□□□□□ -1.41
TSR3	YOR006C	BRF1	P29056	596 aa		6.25	□□□□□ -1.41
TSR3	YOR006C	AEP1	P32493	518 aa		6.25	□□□□□ -1.41
TSR3	YOR006C	ALY1	P36117	915 aa		6.25	□□□□□ -1.41
TSR3	YOR006C	OLA1	P38219	394 aa	Known RBP	6.25	□□□□□ -1.41
TSR3	YOR006C	YHR112C	P38716	378 aa		6.25	□□□□□ -1.41
TSR3	YOR006C	SMF2	P38778	549 aa		6.25	□□□□□ -1.41
TSR3	YOR006C	STN1	P38960	494 aa		6.25	□□□□□ -1.41
TSR3	YOR006C	RGI2	P40188	164 aa		6.25	□□□□□ -1.41
TSR3	YOR006C	TIF34	P40217	347 aa	Known RBP	6.25	□□□□□ -1.41
TSR3	YOR006C	YJL070C	P40361	888 aa		6.25	□□□□□ -1.41
TSR3	YOR006C	DSN1	P40568	576 aa		6.25	□□□□□ -1.41
TSR3	YOR006C	BAP3	P41815	604 aa		6.25	□□□□□ -1.41
TSR3	YOR006C	SAP4	P53036	818 aa		6.25	□□□□□ -1.41
TSR3	YOR006C	VAC7	P53950	1165 aa		6.25	□□□□□ -1.41
TSR3	YOR006C	RPL22B	P56628	122 aa	Known RBP	6.25	□□□□□ -1.41
TSR3	YOR006C	RPC11	Q04307	110 aa	Predicted RBP	6.25	□□□□□ -1.41
TSR3	YOR006C	SAM4	Q08985	325 aa	Known RBP	6.25	□□□□□ -1.41
TSR3	YOR006C	FMP27	Q06179	2628 aa		6.25	□□□□□ -1.41
TSR3	YOR006C	IMA3	P0CW40	589 aa		6.24	□□□□□ -1.41
TSR3	YOR006C	IMA4	P0CW41	589 aa		6.24	□□□□□ -1.41
TSR3	YOR006C	CLN1	P20437	546 aa		6.24	□□□□□ -1.41
TSR3	YOR006C	GCG1	P32656	232 aa	Known RBP	6.24	□□□□□ -1.41
TSR3	YOR006C	NFU1	P32860	256 aa		6.24	□□□□□ -1.41
TSR3	YOR006C	PIM1	P36775	1133 aa		6.24	□□□□□ -1.41
TSR3	YOR006C	MAK5	P38112	773 aa	Predicted RBP	6.24	□□□□□ -1.41
TSR3	YOR006C	MOH1	P38191	138 aa		6.24	□□□□□ -1.41
TSR3	YOR006C	TAE1	P38340	232 aa		6.24	□□□□□ -1.41
TSR3	YOR006C	SRP72	P38688	640 aa	Known RBP	6.24	□□□□□ -1.41
TSR3	YOR006C	DPH1	P40487	425 aa	Known RBP	6.24	□□□□□ -1.41
TSR3	YOR006C	ERR3	P42222	437 aa		6.24	□□□□□ -1.41
TSR3	YOR006C	YJR142W	P47173	342 aa		6.24	□□□□□ -1.41
TSR3	YOR006C	GND2	P53319	492 aa		6.24	□□□□□ -1.41
TSR3	YOR006C	YPL113C	Q02961	396 aa		6.24	□□□□□ -1.41
TSR3	YOR006C	VPS60	Q03390	229 aa		6.24	□□□□□ -1.41
TSR3	YOR006C	YMR160W	Q03823	816 aa		6.24	□□□□□ -1.41
TSR3	YOR006C	ATG10	Q07879	167 aa		6.24	□□□□□ -1.41
TSR3	YOR006C	IMA2	Q08295	589 aa		6.24	□□□□□ -1.41
TSR3	YOR006C	RIO1	Q12196	484 aa	Known RBP	6.24	□□□□□ -1.41
TSR3	YOR006C	SUC2	P00724	532 aa		6.23	□□□□□ -1.41
TSR3	YOR006C	YKR104W	P0CE69	306 aa		6.23	□□□□□ -1.41
TSR3	YOR006C	YML002W	P0CF17	737 aa		6.23	□□□□□ -1.41
TSR3	YOR006C	UBA1	P22515	1024 aa	Known RBP	6.23	□□□□□ -1.41
TSR3	YOR006C	PLC1	P32383	869 aa		6.23	□□□□□ -1.41
TSR3	YOR006C	LTV1	P34078	463 aa		6.23	□□□□□ -1.41
TSR3	YOR006C	RRP3	P38712	501 aa	Known RBP	6.23	□□□□□ -1.41
TSR3	YOR006C	RPH1	P39956	796 aa		6.23	□□□□□ -1.41
TSR3	YOR006C	GID8	P40208	455 aa		6.23	□□□□□ -1.41
TSR3	YOR006C	NMD5	P46970	1048 aa		6.23	□□□□□ -1.41
TSR3	YOR006C	PMT3	P47190	753 aa		6.23	□□□□□ -1.41
TSR3	YOR006C	NBP35	P52920	328 aa		6.23	□□□□□ -1.41
TSR3	YOR006C	COG1	P53079	417 aa		6.23	□□□□□ -1.41
TSR3	YOR006C	SWC4	P53201	476 aa		6.23	□□□□□ -1.41
TSR3	YOR006C	NOP15	P53927	220 aa	Predicted RBP	6.23	□□□□□ -1.41
TSR3	YOR006C	NUP100	Q02629	959 aa		6.23	□□□□□ -1.41
TSR3	YOR006C	MCP2	Q06567	569 aa		6.23	□□□□□ -1.41
TSR3	YOR006C	IRC13	Q08630	104 aa		6.23	□□□□□ -1.41
TSR3	YOR006C	MCH5	Q08777	521 aa		6.23	□□□□□ -1.41
TSR3	YOR006C	NAG1	Q8TGN9	163 aa		6.23	□□□□□ -1.41
TSR3	YOR006C	GID7	P25569	745 aa		6.22	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 35 ms