RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	FMP46	P36141	133 aa	Known RBP	9.23	□□□□□ -0.93
MSB4	YOL112W	HSM3	P38348	480 aa		9.23	□□□□□ -0.93
MSB4	YOL112W	FKH2	P41813	862 aa		9.23	□□□□□ -0.93
MSB4	YOL112W	KXD1	P53158	218 aa		9.23	□□□□□ -0.93
MSB4	YOL112W	VHS1	Q03785	461 aa		9.23	□□□□□ -0.93
MSB4	YOL112W	IOC2	Q12072	812 aa		9.23	□□□□□ -0.93
MSB4	YOL112W	CMR1	Q12510	522 aa	Known RBP	9.23	□□□□□ -0.93
MSB4	YOL112W	RRP12	Q12754	1228 aa	Known RBP	9.23	□□□□□ -0.93
MSB4	YOL112W	CMP2	P14747	604 aa		9.22	□□□□□ -0.93
MSB4	YOL112W	FUR1	P18562	216 aa	Known RBP	9.22	□□□□□ -0.93
MSB4	YOL112W	BUB2	P26448	306 aa	Predicted RBP	9.22	□□□□□ -0.93
MSB4	YOL112W	RPC19	P28000	142 aa	Known RBP	9.22	□□□□□ -0.93
MSB4	YOL112W	SFC1	P33303	322 aa		9.22	□□□□□ -0.93
MSB4	YOL112W	RPS1A	P33442	255 aa	Known RBP	9.22	□□□□□ -0.93
MSB4	YOL112W	GGC1	P38988	300 aa		9.22	□□□□□ -0.93
MSB4	YOL112W	CFD1	P40558	293 aa		9.22	□□□□□ -0.93
MSB4	YOL112W	GCD10	P41814	478 aa		9.22	□□□□□ -0.93
MSB4	YOL112W	FHN1	P53279	174 aa		9.22	□□□□□ -0.93
MSB4	YOL112W	MTQ2	Q03920	221 aa	Predicted RBP	9.22	□□□□□ -0.93
MSB4	YOL112W	SHE9	Q04172	456 aa		9.22	□□□□□ -0.93
MSB4	YOL112W	YOR114W	Q12219	294 aa		9.22	□□□□□ -0.93
MSB4	YOL112W	SKM1	Q12469	655 aa		9.22	□□□□□ -0.93
MSB4	YOL112W	MHT1	Q12525	324 aa		9.22	□□□□□ -0.93
MSB4	YOL112W	COS2	P0CX12	379 aa		9.21	□□□□□ -0.93
MSB4	YOL112W	COS3	P0CX13	379 aa		9.21	□□□□□ -0.93
MSB4	YOL112W	TYR1	P20049	452 aa		9.21	□□□□□ -0.93
MSB4	YOL112W	OXP1	P28273	1286 aa		9.21	□□□□□ -0.93
MSB4	YOL112W	DMA1	P38823	416 aa		9.21	□□□□□ -0.93
MSB4	YOL112W	VRG4	P40107	337 aa		9.21	□□□□□ -0.93
MSB4	YOL112W	COS4	P43542	379 aa		9.21	□□□□□ -0.93
MSB4	YOL112W	UBP6	P43593	499 aa	Known RBP	9.21	□□□□□ -0.93
MSB4	YOL112W	YJL049W	P47048	450 aa		9.21	□□□□□ -0.93
MSB4	YOL112W	BNI4	P53858	892 aa		9.21	□□□□□ -0.93
MSB4	YOL112W	SDH1	Q00711	640 aa		9.21	□□□□□ -0.93
MSB4	YOL112W	YPL109C	Q02981	657 aa		9.21	□□□□□ -0.93
MSB4	YOL112W	TY4A-H	Q6Q5P6	413 aa		9.21	□□□□□ -0.93
MSB4	YOL112W	TRP3	P00937	484 aa		9.21	□□□□□ -0.94
MSB4	YOL112W	GAL4	P04386	881 aa		9.21	□□□□□ -0.94
MSB4	YOL112W	BAS1	P22035	811 aa		9.21	□□□□□ -0.94
MSB4	YOL112W	COX13	P32799	129 aa		9.21	□□□□□ -0.94
MSB4	YOL112W	SQT1	P35184	431 aa		9.21	□□□□□ -0.94
MSB4	YOL112W	KKQ8	P36004	724 aa		9.21	□□□□□ -0.94
MSB4	YOL112W	CTP1	P38152	299 aa		9.21	□□□□□ -0.94
MSB4	YOL112W	BZZ1	P38822	633 aa		9.21	□□□□□ -0.94
MSB4	YOL112W	SCS2	P40075	244 aa	Known RBP	9.21	□□□□□ -0.94
MSB4	YOL112W	MET18	P40469	1032 aa		9.21	□□□□□ -0.94
MSB4	YOL112W	MRM2	P53123	320 aa		9.21	□□□□□ -0.94
MSB4	YOL112W	YMR111C	Q04461	462 aa	Predicted RBP	9.21	□□□□□ -0.94
MSB4	YOL112W	DIN7	Q12086	430 aa		9.21	□□□□□ -0.94
MSB4	YOL112W	YPT6	Q99260	215 aa		9.21	□□□□□ -0.94
MSB4	YOL112W	AI3	P03877	415 aa		9.2	□□□□□ -0.94
MSB4	YOL112W	RPS21A	P0C0V8	87 aa	Known RBP	9.2	□□□□□ -0.94
MSB4	YOL112W	PRP6	P19735	899 aa	Predicted RBP	9.2	□□□□□ -0.94
MSB4	YOL112W	NPP1	P25353	742 aa		9.2	□□□□□ -0.94
MSB4	YOL112W	MLS1	P30952	554 aa		9.2	□□□□□ -0.94
MSB4	YOL112W	BMT2	P38278	337 aa		9.2	□□□□□ -0.94
MSB4	YOL112W	YHL008C	P38750	627 aa		9.2	□□□□□ -0.94
MSB4	YOL112W	AXL2	P38928	823 aa		9.2	□□□□□ -0.94
MSB4	YOL112W	MET30	P39014	640 aa		9.2	□□□□□ -0.94
MSB4	YOL112W	ARB1	P40024	610 aa	Known RBP	9.2	□□□□□ -0.94
MSB4	YOL112W	NOP19	P53317	196 aa	Predicted RBP	9.2	□□□□□ -0.94
MSB4	YOL112W	GIP3	Q03016	1276 aa		9.2	□□□□□ -0.94
MSB4	YOL112W	GLO2	Q05584	274 aa		9.2	□□□□□ -0.94
MSB4	YOL112W	ESA1	Q08649	445 aa		9.2	□□□□□ -0.94
MSB4	YOL112W	YPR022C	Q12139	1133 aa		9.2	□□□□□ -0.94
MSB4	YOL112W	YOL107W	Q12239	342 aa		9.2	□□□□□ -0.94
MSB4	YOL112W	SLH1	P53327	1967 aa	Known RBP	9.2	□□□□□ -0.94
MSB4	YOL112W	LEU4	P06208	619 aa	Known RBP	9.19	□□□□□ -0.94
MSB4	YOL112W	DST1	P07273	309 aa		9.19	□□□□□ -0.94
MSB4	YOL112W	SGV1	P23293	657 aa	Known RBP	9.19	□□□□□ -0.94
MSB4	YOL112W	PTP1	P25044	335 aa		9.19	□□□□□ -0.94
MSB4	YOL112W	AGP1	P25376	633 aa		9.19	□□□□□ -0.94
MSB4	YOL112W	PTC1	P35182	281 aa		9.19	□□□□□ -0.94
MSB4	YOL112W	RRN10	P38204	145 aa		9.19	□□□□□ -0.94
MSB4	YOL112W	VPS41	P38959	992 aa		9.19	□□□□□ -0.94
MSB4	YOL112W	CAB2	P40506	365 aa		9.19	□□□□□ -0.94
MSB4	YOL112W	RIM21	P48565	533 aa		9.19	□□□□□ -0.94
MSB4	YOL112W	RNR4	P49723	345 aa	Known RBP	9.19	□□□□□ -0.94
MSB4	YOL112W	MPS1	P54199	764 aa		9.19	□□□□□ -0.94
MSB4	YOL112W	ROY1	Q04847	553 aa		9.19	□□□□□ -0.94
MSB4	YOL112W	HXK2	P04807	486 aa	Known RBP	9.18	□□□□□ -0.94
MSB4	YOL112W	RPL17A	P05740	184 aa	Known RBP	9.18	□□□□□ -0.94
MSB4	YOL112W	GAL7	P08431	366 aa		9.18	□□□□□ -0.94
MSB4	YOL112W	LAT1	P12695	482 aa	Known RBP	9.18	□□□□□ -0.94
MSB4	YOL112W	PDC5	P16467	563 aa	Known RBP	9.18	□□□□□ -0.94
MSB4	YOL112W	TEC1	P18412	486 aa		9.18	□□□□□ -0.94
MSB4	YOL112W	TRX3	P25372	127 aa		9.18	□□□□□ -0.94
MSB4	YOL112W	BUB3	P26449	341 aa		9.18	□□□□□ -0.94
MSB4	YOL112W	YKR078W	P36158	585 aa	Known RBP	9.18	□□□□□ -0.94
MSB4	YOL112W	CBP4	P37267	147 aa		9.18	□□□□□ -0.94
MSB4	YOL112W	UME6	P39001	836 aa		9.18	□□□□□ -0.94
MSB4	YOL112W	PTR3	P43606	678 aa		9.18	□□□□□ -0.94
MSB4	YOL112W	ALK1	P43633	760 aa	Known RBP	9.18	□□□□□ -0.94
MSB4	YOL112W	RPL17B	P46990	184 aa	Known RBP	9.18	□□□□□ -0.94
MSB4	YOL112W	YNR021W	P53723	404 aa	Known RBP	9.18	□□□□□ -0.94
MSB4	YOL112W	ESF2	P53743	316 aa	Known RBP	9.18	□□□□□ -0.94
MSB4	YOL112W	CUS2	P53830	285 aa	Predicted RBP	9.18	□□□□□ -0.94
MSB4	YOL112W	YNL010W	P53981	241 aa	Known RBP	9.18	□□□□□ -0.94
MSB4	YOL112W	BSC2	Q05611	235 aa		9.18	□□□□□ -0.94
MSB4	YOL112W	FAR10	Q06001	478 aa		9.18	□□□□□ -0.94

Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms