RNA–Protein interactions for RNA: YNL082W

PMS1, Transcript of ATP-binding protein required for mismatch repair, yeast

Gene PMS1, Length 2,622 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMS1	YNL082W	BUD5	P25300	642 aa	Predicted RBP	4.08	□□□□□ -1.76
PMS1	YNL082W	UBA4	P38820	440 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	AFG3	P39925	761 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	SEC28	P40509	296 aa	Known RBP	4.08	□□□□□ -1.76
PMS1	YNL082W	ULP2	P40537	1034 aa	Predicted RBP	4.08	□□□□□ -1.76
PMS1	YNL082W	MRK1	P50873	501 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	RSM23	Q01163	450 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	CIK1	Q01649	594 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	PRP42	Q03776	544 aa	Known RBP	4.08	□□□□□ -1.76
PMS1	YNL082W	PFA4	Q12006	378 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	ARO1	P08566	1588 aa	Known RBP	4.08	□□□□□ -1.76
PMS1	YNL082W	PDR10	P51533	1564 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	PUT2	P07275	575 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	YCR006C	P25350	157 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	YME2	P32843	850 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	OAR1	P35731	278 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	TUL1	P36096	758 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	FET5	P43561	622 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	CAK1	P43568	368 aa	Predicted RBP	4.08	□□□□□ -1.76
PMS1	YNL082W	FAR3	P46671	204 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	MDE1	P47095	244 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	ERG26	P53199	349 aa	Known RBP	4.08	□□□□□ -1.76
PMS1	YNL082W	SIL1	Q08199	421 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	NFI1	Q12216	726 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	TY3B-G	Q99315	1547 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	PUP2	P32379	260 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	YKL100C	P34248	587 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	ADH5	P38113	351 aa	Known RBP	4.08	□□□□□ -1.76
PMS1	YNL082W	YMR178W	Q03219	274 aa	Known RBP	4.08	□□□□□ -1.76
PMS1	YNL082W	PFA5	Q03289	374 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	RSF1	Q05043	376 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	ATG26	Q06321	1198 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	FRE6	Q12473	712 aa		4.08	□□□□□ -1.76
PMS1	YNL082W	RPL31B	P0C2H9	113 aa	Known RBP	4.07	□□□□□ -1.76
PMS1	YNL082W	RAP1	P11938	827 aa		4.07	□□□□□ -1.76
PMS1	YNL082W	SEC63	P14906	663 aa		4.07	□□□□□ -1.76
PMS1	YNL082W	PRP2	P20095	876 aa	Predicted RBP	4.07	□□□□□ -1.76
PMS1	YNL082W	KRR1	P25586	316 aa	Predicted RBP	4.07	□□□□□ -1.76
PMS1	YNL082W	OCT1	P35999	772 aa		4.07	□□□□□ -1.76
PMS1	YNL082W	MIA40	P36046	403 aa		4.07	□□□□□ -1.76
PMS1	YNL082W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
PMS1	YNL082W	YJL043W	P47053	257 aa		4.07	□□□□□ -1.76
PMS1	YNL082W	BUD32	P53323	261 aa		4.07	□□□□□ -1.76
PMS1	YNL082W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
PMS1	YNL082W	PEX25	Q02969	394 aa		4.07	□□□□□ -1.76
PMS1	YNL082W	MDM30	Q05930	598 aa		4.07	□□□□□ -1.76
PMS1	YNL082W	LPD1	P09624	499 aa	Known RBP	4.07	□□□□□ -1.76
PMS1	YNL082W	ARO3	P14843	370 aa	Known RBP	4.07	□□□□□ -1.76
PMS1	YNL082W	SAC1	P32368	623 aa	Known RBP	4.07	□□□□□ -1.76
PMS1	YNL082W	RPC34	P32910	317 aa		4.07	□□□□□ -1.76
PMS1	YNL082W	RPL32	P38061	130 aa	Known RBP	4.07	□□□□□ -1.76
PMS1	YNL082W	CAF130	P53280	1122 aa	Predicted RBP	4.07	□□□□□ -1.76
PMS1	YNL082W	VPS9	P54787	451 aa		4.07	□□□□□ -1.76
PMS1	YNL082W	KAP120	Q02932	1032 aa		4.07	□□□□□ -1.76
PMS1	YNL082W	YOR365C	Q08844	703 aa		4.07	□□□□□ -1.76
PMS1	YNL082W	SMF3	Q12078	473 aa	Predicted RBP	4.07	□□□□□ -1.76
PMS1	YNL082W	RAD52	P06778	471 aa	Known RBP	4.06	□□□□□ -1.76
PMS1	YNL082W	HEM1	P09950	548 aa	Predicted RBP	4.06	□□□□□ -1.76
PMS1	YNL082W	RPL1A	P0CX43	217 aa	Known RBP	4.06	□□□□□ -1.76
PMS1	YNL082W	RPL1B	P0CX44	217 aa	Known RBP	4.06	□□□□□ -1.76
PMS1	YNL082W	SPB1	P25582	841 aa	Predicted RBP	4.06	□□□□□ -1.76
PMS1	YNL082W	MBB1	P39534	108 aa		4.06	□□□□□ -1.76
PMS1	YNL082W	GAT1	P43574	510 aa		4.06	□□□□□ -1.76
PMS1	YNL082W	ATG27	P46989	271 aa		4.06	□□□□□ -1.76
PMS1	YNL082W	TAX4	P47030	604 aa		4.06	□□□□□ -1.76
PMS1	YNL082W	SKS1	Q12505	502 aa		4.06	□□□□□ -1.76
PMS1	YNL082W	STH1	P32597	1359 aa		4.06	□□□□□ -1.76
PMS1	YNL082W	COX3	P00420	269 aa		4.06	□□□□□ -1.76
PMS1	YNL082W	BOS1	P25385	244 aa		4.06	□□□□□ -1.76
PMS1	YNL082W	ADY2	P25613	283 aa		4.06	□□□□□ -1.76
PMS1	YNL082W	PPZ1	P26570	692 aa		4.06	□□□□□ -1.76
PMS1	YNL082W	MGM1	P32266	881 aa		4.06	□□□□□ -1.76
PMS1	YNL082W	PIM1	P36775	1133 aa		4.06	□□□□□ -1.76
PMS1	YNL082W	SLM4	P38247	162 aa		4.06	□□□□□ -1.76
PMS1	YNL082W	SNU56	Q03782	492 aa	Known RBP	4.06	□□□□□ -1.76
PMS1	YNL082W	HEL2	Q05580	639 aa	Known RBP	4.06	□□□□□ -1.76
PMS1	YNL082W	IRC10	Q08118	586 aa		4.06	□□□□□ -1.76
PMS1	YNL082W	TCM62	P38228	572 aa	Known RBP	4.05	□□□□□ -1.76
PMS1	YNL082W	RFC3	P38629	340 aa		4.05	□□□□□ -1.76
PMS1	YNL082W	ARN1	P38731	627 aa		4.05	□□□□□ -1.76
PMS1	YNL082W	OTU2	P38747	307 aa	Known RBP	4.05	□□□□□ -1.76
PMS1	YNL082W	ACL4	Q03771	387 aa		4.05	□□□□□ -1.76
PMS1	YNL082W	EMI2	Q04409	500 aa	Known RBP	4.05	□□□□□ -1.76
PMS1	YNL082W	VTA1	Q06263	330 aa		4.05	□□□□□ -1.76
PMS1	YNL082W	COR1	P07256	457 aa		4.05	□□□□□ -1.76
PMS1	YNL082W	MRP2	P10663	115 aa	Predicted RBP	4.05	□□□□□ -1.76
PMS1	YNL082W	PAP1	P29468	568 aa	Known RBP	4.05	□□□□□ -1.76
PMS1	YNL082W	YME1	P32795	747 aa		4.05	□□□□□ -1.76
PMS1	YNL082W	APE3	P37302	537 aa	Known RBP	4.05	□□□□□ -1.76
PMS1	YNL082W	TIF4631	P39935	952 aa	Known RBP	4.05	□□□□□ -1.76
PMS1	YNL082W	YIL166C	P40445	542 aa		4.05	□□□□□ -1.76
PMS1	YNL082W	YGL108C	P53139	140 aa		4.05	□□□□□ -1.76
PMS1	YNL082W	BSP1	Q06604	576 aa		4.05	□□□□□ -1.76
PMS1	YNL082W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.04	□□□□□ -1.76
PMS1	YNL082W	MBR1	P23493	339 aa		4.04	□□□□□ -1.76
PMS1	YNL082W	SIF2	P38262	535 aa		4.04	□□□□□ -1.76
PMS1	YNL082W	GDI1	P39958	451 aa	Known RBP	4.04	□□□□□ -1.76
PMS1	YNL082W	QRI1	P43123	477 aa	Known RBP	4.04	□□□□□ -1.76
PMS1	YNL082W	HEF3	P53978	1044 aa	Known RBP	4.04	□□□□□ -1.76
PMS1	YNL082W	SUC2	P00724	532 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms