RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W DAL2P25335 343 aa0.84□□□□□ -2.27
PRP39YML046W RAD16P31244 790 aa0.84□□□□□ -2.27
PRP39YML046W FRE1P32791 686 aa0.84□□□□□ -2.27
PRP39YML046W SNU114P36048 1008 aaKnown RBP0.84□□□□□ -2.27
PRP39YML046W YBR138CP38277 524 aa0.84□□□□□ -2.27
PRP39YML046W BUR6P40096 142 aa0.84□□□□□ -2.27
PRP39YML046W IST3P40565 148 aaPredicted RBP0.84□□□□□ -2.27
PRP39YML046W WWM1P43582 211 aaKnown RBP0.84□□□□□ -2.27
PRP39YML046W SGM1P47166 707 aa0.84□□□□□ -2.27
PRP39YML046W ERG26P53199 349 aaKnown RBP0.84□□□□□ -2.27
PRP39YML046W BNA5Q05979 453 aa0.84□□□□□ -2.27
PRP39YML046W MLC2Q06580 163 aa0.84□□□□□ -2.27
PRP39YML046W LSP1Q12230 341 aaKnown RBP0.84□□□□□ -2.27
PRP39YML046W PDR10P51533 1564 aa0.84□□□□□ -2.27
PRP39YML046W GSC2P40989 1895 aa0.84□□□□□ -2.27
PRP39YML046W HAP1P0CE41 1502 aa0.84□□□□□ -2.27
PRP39YML046W YOR1P53049 1477 aa0.84□□□□□ -2.27
PRP39YML046W ULS1Q08562 1619 aa0.84□□□□□ -2.28
PRP39YML046W PEP5P12868 1029 aa0.84□□□□□ -2.28
PRP39YML046W YKL133CP36066 463 aa0.84□□□□□ -2.28
PRP39YML046W YKL023WP36103 277 aaKnown RBP0.84□□□□□ -2.28
PRP39YML046W TSC10P38342 320 aa0.84□□□□□ -2.28
PRP39YML046W DIA4P38705 446 aaPredicted RBP0.84□□□□□ -2.28
PRP39YML046W PSF2P40359 213 aa0.84□□□□□ -2.28
PRP39YML046W PAN6P40459 309 aa0.84□□□□□ -2.28
PRP39YML046W SCD6P45978 349 aaKnown RBP RIP-Chip data0.84□□□□□ -2.28not detected
PRP39YML046W PIR3Q03180 325 aa0.84□□□□□ -2.28
PRP39YML046W IVY1Q04934 453 aa0.84□□□□□ -2.28
PRP39YML046W NUS1Q12063 375 aa0.84□□□□□ -2.28
PRP39YML046W YOR019WQ99248 730 aa0.84□□□□□ -2.28
PRP39YML046W TCB3Q03640 1545 aaKnown RBP0.84□□□□□ -2.28
PRP39YML046W POL1P13382 1468 aa0.83□□□□□ -2.28
PRP39YML046W SEN1Q00416 2231 aaKnown RBP0.83□□□□□ -2.28
PRP39YML046W DOP1Q03921 1698 aa0.83□□□□□ -2.28
PRP39YML046W CHS1P08004 1131 aa0.83□□□□□ -2.28
PRP39YML046W NAT2P37293 288 aa0.83□□□□□ -2.28
PRP39YML046W NPR3P38742 1146 aa0.83□□□□□ -2.28
PRP39YML046W PUG1P40100 303 aa0.83□□□□□ -2.28
PRP39YML046W PTR3P43606 678 aa0.83□□□□□ -2.28
PRP39YML046W LEU9Q12166 604 aaKnown RBP0.83□□□□□ -2.28
PRP39YML046W YLR108CQ12259 485 aa0.83□□□□□ -2.28
PRP39YML046W YPK9Q12697 1472 aa0.83□□□□□ -2.28
PRP39YML046W SMC4Q12267 1418 aa0.83□□□□□ -2.28
PRP39YML046W SUI2P20459 304 aaKnown RBP0.82□□□□□ -2.28
PRP39YML046W SPC72P39723 622 aa0.82□□□□□ -2.28
PRP39YML046W IME4P41833 600 aa0.82□□□□□ -2.28
PRP39YML046W RPS10BP46784 105 aaKnown RBP0.82□□□□□ -2.28
PRP39YML046W GWT1P47026 490 aa0.82□□□□□ -2.28
PRP39YML046W DIA3P52290 468 aa0.82□□□□□ -2.28
PRP39YML046W MDG1P53885 366 aa0.82□□□□□ -2.28
PRP39YML046W DIA1P54005 336 aa0.82□□□□□ -2.28
PRP39YML046W TEN1Q07921 160 aa0.82□□□□□ -2.28
PRP39YML046W YCR007CP25354 239 aa0.82□□□□□ -2.28
PRP39YML046W YKL100CP34248 587 aa0.82□□□□□ -2.28
PRP39YML046W KKQ8P36004 724 aa0.82□□□□□ -2.28
PRP39YML046W RSM22P36056 628 aa0.82□□□□□ -2.28
PRP39YML046W ELO1P39540 310 aa0.82□□□□□ -2.28
PRP39YML046W SLD5Q03406 294 aa0.82□□□□□ -2.28
PRP39YML046W RPS10AQ08745 105 aaPredicted RBP0.82□□□□□ -2.28
PRP39YML046W DNF3Q12674 1656 aa0.81□□□□□ -2.28
PRP39YML046W PAF1P38351 445 aa0.81□□□□□ -2.28
PRP39YML046W SEC24P40482 926 aaKnown RBP0.81□□□□□ -2.28
PRP39YML046W REG1Q00816 1014 aa0.81□□□□□ -2.28
PRP39YML046W BRE1Q07457 700 aaKnown RBP0.81□□□□□ -2.28
PRP39YML046W PSR1Q07800 427 aa0.81□□□□□ -2.28
PRP39YML046W ETT1Q08421 412 aaKnown RBP0.81□□□□□ -2.28
PRP39YML046W THP3Q12049 470 aaKnown RBP0.81□□□□□ -2.28
PRP39YML046W CFT2Q12102 859 aaPredicted RBP0.81□□□□□ -2.28
PRP39YML046W TRM732Q03496 1420 aa0.8□□□□□ -2.28
PRP39YML046W YLR302CO13544 120 aa0.8□□□□□ -2.28
PRP39YML046W NUC1P08466 329 aa0.8□□□□□ -2.28
PRP39YML046W SGV1P23293 657 aaKnown RBP0.8□□□□□ -2.28
PRP39YML046W VMA16P23968 213 aa0.8□□□□□ -2.28
PRP39YML046W ERG8P24521 451 aa0.8□□□□□ -2.28
PRP39YML046W GRX4P32642 244 aa0.8□□□□□ -2.28
PRP39YML046W GRX7P38068 203 aa0.8□□□□□ -2.28
PRP39YML046W ICS2P38284 255 aa0.8□□□□□ -2.28
PRP39YML046W RPS7BP48164 190 aaKnown RBP0.8□□□□□ -2.28
PRP39YML046W BUD32P53323 261 aa0.8□□□□□ -2.28
PRP39YML046W FOL1P53848 824 aa0.8□□□□□ -2.28
PRP39YML046W IBD2P53892 351 aa0.8□□□□□ -2.28
PRP39YML046W VCX1Q99385 411 aa0.8□□□□□ -2.28
PRP39YML046W TY3B-GQ99315 1547 aa0.8□□□□□ -2.28
PRP39YML046W GCN2P15442 1659 aa0.8□□□□□ -2.28
PRP39YML046W BUD5P25300 642 aaPredicted RBP0.8□□□□□ -2.28
PRP39YML046W ADH7P25377 361 aa0.8□□□□□ -2.28
PRP39YML046W CRM1P30822 1084 aaKnown RBP0.8□□□□□ -2.28
PRP39YML046W MTR2P34232 184 aaKnown RBP0.8□□□□□ -2.28
PRP39YML046W DUG2P38149 878 aa0.8□□□□□ -2.28
PRP39YML046W HIS6P40545 261 aa0.8□□□□□ -2.28
PRP39YML046W YGR126WP53274 230 aa0.8□□□□□ -2.28
PRP39YML046W YGR127WP53275 312 aa0.8□□□□□ -2.28
PRP39YML046W GOR1P53839 350 aa0.8□□□□□ -2.28
PRP39YML046W DPB4Q04603 196 aaKnown RBP0.8□□□□□ -2.28
PRP39YML046W AIM32Q04689 311 aa0.8□□□□□ -2.28
PRP39YML046W SKG3Q06315 1026 aa0.8□□□□□ -2.28
PRP39YML046W MPD2Q99316 277 aa0.8□□□□□ -2.28
PRP39YML046W USO1P25386 1790 aa0.79□□□□□ -2.28
PRP39YML046W SRB8P25648 1427 aa0.79□□□□□ -2.28
PRP39YML046W PHO81P17442 1178 aa0.79□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms