RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEN1	YLR430W	GTO1	P48239	356 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	ART5	P53244	586 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	RSM27	P53305	110 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	SEN54	Q02825	467 aa	Predicted RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	YET2	Q04210	160 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	GRS2	Q06817	618 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	UAF30	Q08747	228 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	YOR283W	Q12040	230 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	LYS21	Q12122	440 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	CDC28	P00546	298 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	MET2	P08465	486 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	ZWF1	P11412	505 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	BMT2	P38278	337 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	YBR238C	P38330	731 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	VPS29	P38759	282 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	YHR182W	P38870	785 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	ACF4	P47129	309 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	MFB1	Q04922	465 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	GPN3	Q06543	272 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	NUP188	P52593	1655 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	LEU4	P06208	619 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	RPS1B	P23248	255 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	URA7	P28274	579 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	RPS1A	P33442	255 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	YEL020C	P39994	560 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	GIM4	P40005	111 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	YKE4	P40544	346 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	LYS20	P48570	428 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	SPC98	P53540	846 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	PPN1	Q04119	674 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	PHO4	P07270	312 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	CCA1	P21269	546 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	COQ2	P32378	372 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	SHM2	P37291	469 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	MBA1	P38300	278 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	DOT6	P40059	670 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	YMR144W	P40214	342 aa	Known RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	QDR1	P40475	563 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	GNA1	P43577	159 aa	Predicted RBP	4.13	□□□□□ -1.75
SEN1	YLR430W	ROG3	P43602	733 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	CLD1	P53264	445 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	DSE4	P53753	1117 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	SMA1	Q02651	245 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	PRM6	Q04705	352 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	YFT2	Q06676	274 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	FYV7	Q12247	151 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	TRM10	Q12400	293 aa		4.13	□□□□□ -1.75
SEN1	YLR430W	KIN28	P06242	306 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	SLY1	P22213	666 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	IKI1	P38874	309 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	IPT1	P38954	527 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	CHS6	P40955	746 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	YJL043W	P47053	257 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	YML6	P51998	286 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	TIM44	Q01852	431 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	YPL199C	Q08954	240 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	RPA190	P10964	1664 aa	Known RBP	4.12	□□□□□ -1.75
SEN1	YLR430W	AI2	P03876	854 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	HCM1	P25364	564 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	HEM12	P32347	362 aa	Predicted RBP	4.12	□□□□□ -1.75
SEN1	YLR430W	MAL32	P38158	584 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	MAP2	P38174	421 aa	Known RBP	4.12	□□□□□ -1.75
SEN1	YLR430W	CIN1	P40987	1014 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	THI11	P47183	340 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	HLJ1	P48353	224 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	YGR026W	P53217	278 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	MAL12	P53341	584 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	SAM4	Q08985	325 aa	Known RBP	4.12	□□□□□ -1.75
SEN1	YLR430W	SAS5	Q99314	248 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	FRT1	Q99332	602 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	BI2	P03873	423 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	POF1	P25576	258 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	SRB6	P32570	121 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	RPF2	P36160	344 aa	Known RBP	4.12	□□□□□ -1.75
SEN1	YLR430W	ARN2	P38724	620 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	YHK8	P38776	514 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	DOC1	P53068	250 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	HSP31	Q04432	237 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	ASR1	Q06834	288 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	FAL1	Q12099	399 aa	Known RBP	4.12	□□□□□ -1.75
SEN1	YLR430W	IDI1	P15496	288 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	YDJ1	P25491	409 aa	Known RBP	4.12	□□□□□ -1.75
SEN1	YLR430W	MGR1	P25573	417 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	ORC2	P32833	620 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	SEF1	P34228	1148 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	RGI2	P40188	164 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	MTD1	Q02046	320 aa	Known RBP	4.12	□□□□□ -1.75
SEN1	YLR430W	TRS130	Q03660	1102 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	YDR387C	Q04162	555 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	PLM2	Q04383	521 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	MYO5	Q04439	1219 aa	Known RBP	4.12	□□□□□ -1.75
SEN1	YLR430W	YLR224W	Q05947	369 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	GRC3	Q07845	632 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	YOR012W	Q12351	137 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	AAC3	P18238	307 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	ISC10	P32645	267 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	PDC2	P32896	925 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	NVJ1	P38881	321 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	AIM18	P38884	321 aa		4.12	□□□□□ -1.75
SEN1	YLR430W	SUR2	P38992	349 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms