RNA–Protein interactions for RNA: YKL166C

TPK3, Transcript of cAMP-dependent protein kinase catalytic subunit, yeast

Gene TPK3, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPK3	YKL166C	TSR2	Q06672	205 aa	Known RBP	3.2	□□□□□ -1.9
TPK3	YKL166C	FOB1	O13329	566 aa		3.19	□□□□□ -1.9
TPK3	YKL166C	SUC2	P00724	532 aa		3.19	□□□□□ -1.9
TPK3	YKL166C	PRP2	P20095	876 aa	Predicted RBP	3.19	□□□□□ -1.9
TPK3	YKL166C	SHP1	P34223	423 aa		3.19	□□□□□ -1.9
TPK3	YKL166C	TCM62	P38228	572 aa	Known RBP	3.19	□□□□□ -1.9
TPK3	YKL166C	RRP3	P38712	501 aa	Known RBP	3.19	□□□□□ -1.9
TPK3	YKL166C	ERP2	P39704	215 aa		3.19	□□□□□ -1.9
TPK3	YKL166C	TIF4631	P39935	952 aa	Known RBP	3.19	□□□□□ -1.9
TPK3	YKL166C	CSM2	P40465	213 aa		3.19	□□□□□ -1.9
TPK3	YKL166C	DOT5	P40553	215 aa		3.19	□□□□□ -1.9
TPK3	YKL166C	ARF3	P40994	183 aa	RIP-Chip data	3.19	□□□□□ -1.9	not detected
TPK3	YKL166C	ROK1	P45818	564 aa	Predicted RBP	3.19	□□□□□ -1.9
TPK3	YKL166C	YMR317W	Q04893	1140 aa		3.19	□□□□□ -1.9
TPK3	YKL166C	GLO2	Q05584	274 aa		3.19	□□□□□ -1.9
TPK3	YKL166C	THP1	Q08231	455 aa		3.19	□□□□□ -1.9
TPK3	YKL166C	DAP1	Q12091	152 aa		3.19	□□□□□ -1.9
TPK3	YKL166C	MRS3	P10566	314 aa		3.18	□□□□□ -1.9
TPK3	YKL166C	APE1	P14904	514 aa		3.18	□□□□□ -1.9
TPK3	YKL166C	AMD1	P15274	810 aa	Known RBP	3.18	□□□□□ -1.9
TPK3	YKL166C	SEC62	P21825	274 aa		3.18	□□□□□ -1.9
TPK3	YKL166C	YME1	P32795	747 aa		3.18	□□□□□ -1.9
TPK3	YKL166C	OSH3	P38713	996 aa	Known RBP	3.18	□□□□□ -1.9
TPK3	YKL166C	YJL068C	P40363	299 aa		3.18	□□□□□ -1.9
TPK3	YKL166C	MET18	P40469	1032 aa		3.18	□□□□□ -1.9
TPK3	YKL166C	YGL082W	P53155	381 aa		3.18	□□□□□ -1.9
TPK3	YKL166C	JJJ1	P53863	590 aa		3.18	□□□□□ -1.9
TPK3	YKL166C	HEF3	P53978	1044 aa	Known RBP	3.18	□□□□□ -1.9
TPK3	YKL166C	RPM2	Q02773	1202 aa		3.18	□□□□□ -1.9
TPK3	YKL166C	HCR1	Q05775	265 aa	Known RBP	3.18	□□□□□ -1.9
TPK3	YKL166C	BNA5	Q05979	453 aa		3.18	□□□□□ -1.9
TPK3	YKL166C	MRD1	Q06106	887 aa	Known RBP	3.18	□□□□□ -1.9
TPK3	YKL166C	CDC31	P06704	161 aa	Known RBP	3.17	□□□□□ -1.9
TPK3	YKL166C	PAP1	P29468	568 aa	Known RBP	3.17	□□□□□ -1.9
TPK3	YKL166C	MSN2	P33748	704 aa		3.17	□□□□□ -1.9
TPK3	YKL166C	SIP2	P34164	415 aa	Known RBP	3.17	□□□□□ -1.9
TPK3	YKL166C	DUG2	P38149	878 aa		3.17	□□□□□ -1.9
TPK3	YKL166C	CST26	P38226	397 aa		3.17	□□□□□ -1.9
TPK3	YKL166C	UTP9	P38882	575 aa	Known RBP	3.17	□□□□□ -1.9
TPK3	YKL166C	VPS52	P39904	641 aa		3.17	□□□□□ -1.9
TPK3	YKL166C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
TPK3	YKL166C	TWF1	P53250	332 aa		3.17	□□□□□ -1.9
TPK3	YKL166C	MRPL19	P53875	158 aa		3.17	□□□□□ -1.9
TPK3	YKL166C	MDM1	Q01846	1127 aa		3.17	□□□□□ -1.9
TPK3	YKL166C	SLD5	Q03406	294 aa		3.17	□□□□□ -1.9
TPK3	YKL166C	YDR239C	Q03780	787 aa		3.17	□□□□□ -1.9
TPK3	YKL166C	SEC39	Q12745	709 aa		3.17	□□□□□ -1.9
TPK3	YKL166C	YDL007C-A	Q2V2Q0	85 aa		3.17	□□□□□ -1.9
TPK3	YKL166C	MET17	P06106	444 aa		3.16	□□□□□ -1.9
TPK3	YKL166C	COR1	P07256	457 aa		3.16	□□□□□ -1.9
TPK3	YKL166C	RPL31B	P0C2H9	113 aa	Known RBP	3.16	□□□□□ -1.9
TPK3	YKL166C	CKA1	P15790	372 aa		3.16	□□□□□ -1.9
TPK3	YKL166C	ROX1	P25042	368 aa		3.16	□□□□□ -1.9
TPK3	YKL166C	YCR007C	P25354	239 aa		3.16	□□□□□ -1.9
TPK3	YKL166C	UTR4	P32626	227 aa		3.16	□□□□□ -1.9
TPK3	YKL166C	YNK1	P36010	153 aa	Known RBP	3.16	□□□□□ -1.9
TPK3	YKL166C	BNA4	P38169	460 aa		3.16	□□□□□ -1.9
TPK3	YKL166C	VID24	P38263	362 aa		3.16	□□□□□ -1.9
TPK3	YKL166C	MBB1	P39534	108 aa		3.16	□□□□□ -1.9
TPK3	YKL166C	IKS1	P47042	667 aa		3.16	□□□□□ -1.9
TPK3	YKL166C	SLG1	P54867	378 aa		3.16	□□□□□ -1.9
TPK3	YKL166C	TAF11	Q04226	346 aa		3.16	□□□□□ -1.9
TPK3	YKL166C	SYO1	Q07395	620 aa		3.16	□□□□□ -1.9
TPK3	YKL166C	ATG29	Q12092	213 aa		3.16	□□□□□ -1.9
TPK3	YKL166C	GRX6	Q12438	231 aa		3.16	□□□□□ -1.9
TPK3	YKL166C	YML002W	P0CF17	737 aa		3.15	□□□□□ -1.91
TPK3	YKL166C	GPI10	P30777	616 aa		3.15	□□□□□ -1.91
TPK3	YKL166C	LOS1	P33418	1100 aa	Predicted RBP	3.15	□□□□□ -1.91
TPK3	YKL166C	SEC66	P33754	206 aa		3.15	□□□□□ -1.91
TPK3	YKL166C	CMC1	P36064	111 aa		3.15	□□□□□ -1.91
TPK3	YKL166C	YGL260W	P53056	76 aa		3.15	□□□□□ -1.91
TPK3	YKL166C	CAF130	P53280	1122 aa	Predicted RBP	3.15	□□□□□ -1.91
TPK3	YKL166C	ZPR1	P53303	486 aa	Known RBP	3.15	□□□□□ -1.91
TPK3	YKL166C	CRZ1	P53968	678 aa		3.15	□□□□□ -1.91
TPK3	YKL166C	PDS5	Q04264	1277 aa		3.15	□□□□□ -1.91
TPK3	YKL166C	TAP42	Q04372	366 aa		3.15	□□□□□ -1.91
TPK3	YKL166C	IVY1	Q04934	453 aa		3.15	□□□□□ -1.91
TPK3	YKL166C	PHO92	Q06390	306 aa		3.15	□□□□□ -1.91
TPK3	YKL166C	RIM20	Q12033	661 aa		3.15	□□□□□ -1.91
TPK3	YKL166C	YDL009C	Q12210	107 aa		3.15	□□□□□ -1.91
TPK3	YKL166C	INH1	P01097	85 aa		3.14	□□□□□ -1.91
TPK3	YKL166C	NDC1	P32500	655 aa		3.14	□□□□□ -1.91
TPK3	YKL166C	FRE1	P32791	686 aa		3.14	□□□□□ -1.91
TPK3	YKL166C	PMT1	P33775	817 aa		3.14	□□□□□ -1.91
TPK3	YKL166C	FMP46	P36141	133 aa	Known RBP	3.14	□□□□□ -1.91
TPK3	YKL166C	KEL1	P38853	1164 aa	Known RBP	3.14	□□□□□ -1.91
TPK3	YKL166C	SMF1	P38925	575 aa		3.14	□□□□□ -1.91
TPK3	YKL166C	DHH1	P39517	506 aa	Known RBP	3.14	□□□□□ -1.91
TPK3	YKL166C	RLI1	Q03195	608 aa	Known RBP	3.14	□□□□□ -1.91
TPK3	YKL166C	RQC1	Q05468	723 aa	Known RBP	3.14	□□□□□ -1.91
TPK3	YKL166C	RBS1	Q05672	457 aa	Known RBP	3.14	□□□□□ -1.91
TPK3	YKL166C	MRPL51	Q06090	140 aa	Predicted RBP	3.14	□□□□□ -1.91
TPK3	YKL166C	CFT2	Q12102	859 aa	Predicted RBP	3.14	□□□□□ -1.91
TPK3	YKL166C	YMR230W-A	Q3E7B5	62 aa		3.14	□□□□□ -1.91
TPK3	YKL166C	BRR1	Q99177	341 aa	Predicted RBP	3.14	□□□□□ -1.91
TPK3	YKL166C	RAV1	P47104	1357 aa		3.13	□□□□□ -1.91
TPK3	YKL166C	RPL15A	P05748	204 aa	Known RBP	3.13	□□□□□ -1.91
TPK3	YKL166C	BUD14	P27637	709 aa		3.13	□□□□□ -1.91
TPK3	YKL166C	ATS1	P31386	333 aa		3.13	□□□□□ -1.91
TPK3	YKL166C	YMR147W	P40218	223 aa	Known RBP	3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms