RNA–Protein interactions for RNA: YGR239C

PEX21, Transcript of Peroxin required for peroxisomal matrix protein targeting, yeast

Gene PEX21, Length 867 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX21	YGR239C	SPS4	P09937	338 aa		4.19	□□□□□ -1.74
PEX21	YGR239C	RAD14	P28519	371 aa		4.19	□□□□□ -1.74
PEX21	YGR239C	DPH2	P32461	534 aa		4.19	□□□□□ -1.74
PEX21	YGR239C	RML2	P32611	393 aa		4.19	□□□□□ -1.74
PEX21	YGR239C	ARA1	P38115	344 aa		4.19	□□□□□ -1.74
PEX21	YGR239C	RXT2	P38255	430 aa		4.19	□□□□□ -1.74
PEX21	YGR239C	RRT2	P38332	387 aa		4.19	□□□□□ -1.74
PEX21	YGR239C	ARP1	P38696	384 aa		4.19	□□□□□ -1.74
PEX21	YGR239C	XBP1	P40489	647 aa		4.19	□□□□□ -1.74
PEX21	YGR239C	ULP2	P40537	1034 aa	Predicted RBP	4.19	□□□□□ -1.74
PEX21	YGR239C	GAT1	P43574	510 aa		4.19	□□□□□ -1.74
PEX21	YGR239C	TCB2	P48231	1178 aa		4.19	□□□□□ -1.74
PEX21	YGR239C	OCA1	P50946	238 aa	Predicted RBP	4.19	□□□□□ -1.74
PEX21	YGR239C	YGL108C	P53139	140 aa		4.19	□□□□□ -1.74
PEX21	YGR239C	ZPR1	P53303	486 aa	Known RBP	4.19	□□□□□ -1.74
PEX21	YGR239C	SOL4	P53315	255 aa		4.19	□□□□□ -1.74
PEX21	YGR239C	EAF7	P53911	425 aa	Known RBP	4.19	□□□□□ -1.74
PEX21	YGR239C	OAZ1	Q02803	292 aa		4.19	□□□□□ -1.74
PEX21	YGR239C	RIM13	Q03792	727 aa		4.19	□□□□□ -1.74
PEX21	YGR239C	DON1	Q05610	365 aa		4.19	□□□□□ -1.74
PEX21	YGR239C	PEP4	P07267	405 aa	Known RBP	4.18	□□□□□ -1.74
PEX21	YGR239C	THI2	P38141	450 aa		4.18	□□□□□ -1.74
PEX21	YGR239C	POP1	P41812	875 aa		4.18	□□□□□ -1.74
PEX21	YGR239C	ATG27	P46989	271 aa		4.18	□□□□□ -1.74
PEX21	YGR239C	HEF3	P53978	1044 aa	Known RBP	4.18	□□□□□ -1.74
PEX21	YGR239C	THI7	Q05998	598 aa		4.18	□□□□□ -1.74
PEX21	YGR239C	MES1	P00958	751 aa	Known RBP	4.17	□□□□□ -1.74
PEX21	YGR239C	RAD52	P06778	471 aa	Known RBP	4.17	□□□□□ -1.74
PEX21	YGR239C	PEP5	P12868	1029 aa		4.17	□□□□□ -1.74
PEX21	YGR239C	NAT1	P12945	854 aa	Known RBP	4.17	□□□□□ -1.74
PEX21	YGR239C	URA4	P20051	364 aa		4.17	□□□□□ -1.74
PEX21	YGR239C	PRP2	P20095	876 aa	Predicted RBP	4.17	□□□□□ -1.74
PEX21	YGR239C	CPR2	P23285	205 aa		4.17	□□□□□ -1.74
PEX21	YGR239C	PDR3	P33200	976 aa		4.17	□□□□□ -1.74
PEX21	YGR239C	LAG1	P38703	411 aa		4.17	□□□□□ -1.74
PEX21	YGR239C	YHR210C	P38893	341 aa		4.17	□□□□□ -1.74
PEX21	YGR239C	TIF4631	P39935	952 aa	Known RBP	4.17	□□□□□ -1.74
PEX21	YGR239C	SEC28	P40509	296 aa	Known RBP	4.17	□□□□□ -1.74
PEX21	YGR239C	FMS1	P50264	508 aa		4.17	□□□□□ -1.74
PEX21	YGR239C	CUL3	P53202	744 aa		4.17	□□□□□ -1.74
PEX21	YGR239C	YDR415C	Q04033	374 aa	Predicted RBP	4.17	□□□□□ -1.74
PEX21	YGR239C	CAC2	Q04199	468 aa		4.17	□□□□□ -1.74
PEX21	YGR239C	SEG1	Q04279	960 aa		4.17	□□□□□ -1.74
PEX21	YGR239C	SOV1	Q04748	898 aa		4.17	□□□□□ -1.74
PEX21	YGR239C	HEL2	Q05580	639 aa	Known RBP	4.17	□□□□□ -1.74
PEX21	YGR239C	DCI1	Q08558	271 aa		4.17	□□□□□ -1.74
PEX21	YGR239C	CFT2	Q12102	859 aa	Predicted RBP	4.17	□□□□□ -1.74
PEX21	YGR239C	YPR089W	O13585	888 aa		4.16	□□□□□ -1.74
PEX21	YGR239C	RPL42A	P0CX27	106 aa	Known RBP	4.16	□□□□□ -1.74
PEX21	YGR239C	RPL42B	P0CX28	106 aa	Known RBP	4.16	□□□□□ -1.74
PEX21	YGR239C	TYR1	P20049	452 aa		4.16	□□□□□ -1.74
PEX21	YGR239C	SNC1	P31109	117 aa		4.16	□□□□□ -1.74
PEX21	YGR239C	CUE2	P36075	443 aa	Known RBP	4.16	□□□□□ -1.74
PEX21	YGR239C	CBP4	P37267	147 aa		4.16	□□□□□ -1.74
PEX21	YGR239C	TCM62	P38228	572 aa	Known RBP	4.16	□□□□□ -1.74
PEX21	YGR239C	YHR054C	P38780	354 aa		4.16	□□□□□ -1.74
PEX21	YGR239C	YMR124W	P39523	943 aa	Known RBP	4.16	□□□□□ -1.74
PEX21	YGR239C	EFM4	P40516	257 aa		4.16	□□□□□ -1.74
PEX21	YGR239C	URB2	P47108	1174 aa		4.16	□□□□□ -1.74
PEX21	YGR239C	VPS9	P54787	451 aa		4.16	□□□□□ -1.74
PEX21	YGR239C	NUP100	Q02629	959 aa		4.16	□□□□□ -1.74
PEX21	YGR239C	VTC3	Q02725	835 aa		4.16	□□□□□ -1.74
PEX21	YGR239C	EKI1	Q03764	534 aa		4.16	□□□□□ -1.74
PEX21	YGR239C	SPE3	Q12074	293 aa	Known RBP	4.16	□□□□□ -1.74
PEX21	YGR239C	NCE102	Q12207	173 aa	RIP-Chip data	4.16	□□□□□ -1.74	not detected
PEX21	YGR239C	HER1	Q12276	1246 aa		4.16	□□□□□ -1.74
PEX21	YGR239C	YNL162W-A	Q3E7A8	72 aa		4.16	□□□□□ -1.74
PEX21	YGR239C	BAR1	P12630	587 aa		4.15	□□□□□ -1.75
PEX21	YGR239C	MSN2	P33748	704 aa		4.15	□□□□□ -1.75
PEX21	YGR239C	PHD1	P36093	366 aa		4.15	□□□□□ -1.75
PEX21	YGR239C	SLM4	P38247	162 aa		4.15	□□□□□ -1.75
PEX21	YGR239C	MMS4	P38257	691 aa		4.15	□□□□□ -1.75
PEX21	YGR239C	CFD1	P40558	293 aa		4.15	□□□□□ -1.75
PEX21	YGR239C	YIR016W	P40572	265 aa		4.15	□□□□□ -1.75
PEX21	YGR239C	PSA1	P41940	361 aa	Known RBP	4.15	□□□□□ -1.75
PEX21	YGR239C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
PEX21	YGR239C	RMD9	P53140	646 aa	Known RBP	4.15	□□□□□ -1.75
PEX21	YGR239C	YGR111W	P53265	400 aa		4.15	□□□□□ -1.75
PEX21	YGR239C	PEX25	Q02969	394 aa		4.15	□□□□□ -1.75
PEX21	YGR239C	HOT1	Q03213	719 aa		4.15	□□□□□ -1.75
PEX21	YGR239C	YMR130W	Q04223	302 aa		4.15	□□□□□ -1.75
PEX21	YGR239C	TAP42	Q04372	366 aa		4.15	□□□□□ -1.75
PEX21	YGR239C	DIC1	Q06143	298 aa		4.15	□□□□□ -1.75
PEX21	YGR239C	GSH2	Q08220	491 aa		4.15	□□□□□ -1.75
PEX21	YGR239C	RHO2	P06781	192 aa		4.14	□□□□□ -1.75
PEX21	YGR239C	BRF1	P29056	596 aa		4.14	□□□□□ -1.75
PEX21	YGR239C	MGM1	P32266	881 aa		4.14	□□□□□ -1.75
PEX21	YGR239C	NIP100	P33420	868 aa		4.14	□□□□□ -1.75
PEX21	YGR239C	VHC1	P38329	1120 aa		4.14	□□□□□ -1.75
PEX21	YGR239C	ERG7	P38604	731 aa		4.14	□□□□□ -1.75
PEX21	YGR239C	TOM71	P38825	639 aa	Known RBP	4.14	□□□□□ -1.75
PEX21	YGR239C	KEL1	P38853	1164 aa	Known RBP	4.14	□□□□□ -1.75
PEX21	YGR239C	PHO90	P39535	881 aa		4.14	□□□□□ -1.75
PEX21	YGR239C	COS5	P47187	383 aa		4.14	□□□□□ -1.75
PEX21	YGR239C	YNL181W	P53878	407 aa		4.14	□□□□□ -1.75
PEX21	YGR239C	KTR5	P53966	522 aa	Predicted RBP	4.14	□□□□□ -1.75
PEX21	YGR239C	COS7	Q07788	383 aa		4.14	□□□□□ -1.75
PEX21	YGR239C	DIS3	Q08162	1001 aa	Known RBP	4.14	□□□□□ -1.75
PEX21	YGR239C	VAM3	Q12241	283 aa		4.14	□□□□□ -1.75
PEX21	YGR239C	BRR1	Q99177	341 aa	Predicted RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms