RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeast

Gene VMA21, Length 234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA21	YGR105W	PMU1	P36069	295 aa		3.03	□□□□□ -1.92
VMA21	YGR105W	CCT6	P39079	546 aa		3.03	□□□□□ -1.92
VMA21	YGR105W	COQ9	Q05779	260 aa		3.03	□□□□□ -1.92
VMA21	YGR105W	HSH49	Q99181	213 aa	Predicted RBP	3.03	□□□□□ -1.92
VMA21	YGR105W	SUC2	P00724	532 aa		3.02	□□□□□ -1.93
VMA21	YGR105W	TIF5	P38431	405 aa	Known RBP	3.02	□□□□□ -1.93
VMA21	YGR105W	SHO1	P40073	367 aa		3.02	□□□□□ -1.93
VMA21	YGR105W	WSC2	P53832	503 aa		3.02	□□□□□ -1.93
VMA21	YGR105W	IVY1	Q04934	453 aa		3.02	□□□□□ -1.93
VMA21	YGR105W	MRPL51	Q06090	140 aa	Predicted RBP	3.02	□□□□□ -1.93
VMA21	YGR105W	NOP58	Q12499	511 aa	Known RBP	3.02	□□□□□ -1.93
VMA21	YGR105W	YCR007C	P25354	239 aa		3.01	□□□□□ -1.93
VMA21	YGR105W	ELO2	P25358	347 aa		3.01	□□□□□ -1.93
VMA21	YGR105W	TUL1	P36096	758 aa		3.01	□□□□□ -1.93
VMA21	YGR105W	ALG5	P40350	334 aa		3.01	□□□□□ -1.93
VMA21	YGR105W	IDP2	P41939	412 aa		3.01	□□□□□ -1.93
VMA21	YGR105W	YJL132W	P47014	750 aa		3.01	□□□□□ -1.93
VMA21	YGR105W	PHO92	Q06390	306 aa		3.01	□□□□□ -1.93
VMA21	YGR105W	YEH1	Q07804	573 aa		3.01	□□□□□ -1.93
VMA21	YGR105W	THP1	Q08231	455 aa		3.01	□□□□□ -1.93
VMA21	YGR105W	YPT6	Q99260	215 aa		3.01	□□□□□ -1.93
VMA21	YGR105W	PAH1	P32567	862 aa		3	□□□□□ -1.93
VMA21	YGR105W	SAC6	P32599	642 aa	Known RBP	3	□□□□□ -1.93
VMA21	YGR105W	UTR4	P32626	227 aa		3	□□□□□ -1.93
VMA21	YGR105W	SHP1	P34223	423 aa		3	□□□□□ -1.93
VMA21	YGR105W	SEF1	P34228	1148 aa		3	□□□□□ -1.93
VMA21	YGR105W	FLC2	P39719	783 aa		3	□□□□□ -1.93
VMA21	YGR105W	TIF4631	P39935	952 aa	Known RBP	3	□□□□□ -1.93
VMA21	YGR105W	HAT2	P39984	401 aa		3	□□□□□ -1.93
VMA21	YGR105W	VID27	P40157	782 aa		3	□□□□□ -1.93
VMA21	YGR105W	ALG8	P40351	577 aa		3	□□□□□ -1.93
VMA21	YGR105W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
VMA21	YGR105W	AIM22	P47051	409 aa		3	□□□□□ -1.93
VMA21	YGR105W	IMD4	P50094	524 aa	Known RBP	3	□□□□□ -1.93
VMA21	YGR105W	TOF2	Q02208	771 aa		3	□□□□□ -1.93
VMA21	YGR105W	IRC15	Q02733	499 aa		3	□□□□□ -1.93
VMA21	YGR105W	YDR056C	Q12025	205 aa		3	□□□□□ -1.93
VMA21	YGR105W	NMD4	Q12129	218 aa		3	□□□□□ -1.93
VMA21	YGR105W	ATR1	P13090	542 aa		2.99	□□□□□ -1.93
VMA21	YGR105W	MSN2	P33748	704 aa		2.99	□□□□□ -1.93
VMA21	YGR105W	DUG2	P38149	878 aa		2.99	□□□□□ -1.93
VMA21	YGR105W	BNA4	P38169	460 aa		2.99	□□□□□ -1.93
VMA21	YGR105W	TCM62	P38228	572 aa	Known RBP	2.99	□□□□□ -1.93
VMA21	YGR105W	SPG5	P42933	373 aa		2.99	□□□□□ -1.93
VMA21	YGR105W	YPI1	P43587	155 aa		2.99	□□□□□ -1.93
VMA21	YGR105W	LSP1	Q12230	341 aa	Known RBP	2.99	□□□□□ -1.93
VMA21	YGR105W	ENT1	Q12518	454 aa		2.99	□□□□□ -1.93
VMA21	YGR105W	CTF3	Q12748	733 aa		2.99	□□□□□ -1.93
VMA21	YGR105W	YCL021W-A	Q96VH3	125 aa		2.99	□□□□□ -1.93
VMA21	YGR105W	SEC53	P07283	254 aa	Known RBP	2.98	□□□□□ -1.93
VMA21	YGR105W	AAC3	P18238	307 aa		2.98	□□□□□ -1.93
VMA21	YGR105W	TCD2	P36101	447 aa	Known RBP	2.98	□□□□□ -1.93
VMA21	YGR105W	YBP1	P38315	674 aa		2.98	□□□□□ -1.93
VMA21	YGR105W	MSR1	P38714	643 aa		2.98	□□□□□ -1.93
VMA21	YGR105W	ALK1	P43633	760 aa	Known RBP	2.98	□□□□□ -1.93
VMA21	YGR105W	VID30	P53076	958 aa		2.98	□□□□□ -1.93
VMA21	YGR105W	GPI1	P53306	609 aa		2.98	□□□□□ -1.93
VMA21	YGR105W	SMA2	Q04658	369 aa		2.98	□□□□□ -1.93
VMA21	YGR105W	VPS74	Q06385	345 aa		2.98	□□□□□ -1.93
VMA21	YGR105W	RLM1	Q12224	676 aa		2.98	□□□□□ -1.93
VMA21	YGR105W	REV1	P12689	985 aa		2.97	□□□□□ -1.93
VMA21	YGR105W	PUT3	P25502	979 aa	Predicted RBP	2.97	□□□□□ -1.93
VMA21	YGR105W	NOP16	P40007	231 aa	Known RBP	2.97	□□□□□ -1.93
VMA21	YGR105W	RBG2	P53295	368 aa	Known RBP	2.97	□□□□□ -1.93
VMA21	YGR105W	ZPR1	P53303	486 aa	Known RBP	2.97	□□□□□ -1.93
VMA21	YGR105W	HEF3	P53978	1044 aa	Known RBP	2.97	□□□□□ -1.93
VMA21	YGR105W	HNT3	Q08702	217 aa		2.97	□□□□□ -1.93
VMA21	YGR105W	CFT2	Q12102	859 aa	Predicted RBP	2.97	□□□□□ -1.93
VMA21	YGR105W	RKM5	Q12367	367 aa		2.97	□□□□□ -1.93
VMA21	YGR105W	SEM1	O94742	89 aa		2.96	□□□□□ -1.94
VMA21	YGR105W	MES1	P00958	751 aa	Known RBP	2.96	□□□□□ -1.94
VMA21	YGR105W	PMR1	P13586	950 aa		2.96	□□□□□ -1.94
VMA21	YGR105W	EXO70	P19658	623 aa		2.96	□□□□□ -1.94
VMA21	YGR105W	RNA14	P25298	677 aa	Known RBP	2.96	□□□□□ -1.94
VMA21	YGR105W	FUN19	P28003	413 aa	Predicted RBP	2.96	□□□□□ -1.94
VMA21	YGR105W	GWT1	P47026	490 aa		2.96	□□□□□ -1.94
VMA21	YGR105W	UPF3	P48412	387 aa	Known RBP	2.96	□□□□□ -1.94
VMA21	YGR105W	MRX6	P48564	524 aa		2.96	□□□□□ -1.94
VMA21	YGR105W	MSO1	P53604	210 aa	Known RBP	2.96	□□□□□ -1.94
VMA21	YGR105W	RBS1	Q05672	457 aa	Known RBP	2.96	□□□□□ -1.94
VMA21	YGR105W	VPS38	Q05919	439 aa		2.96	□□□□□ -1.94
VMA21	YGR105W	YJR112W-A	Q3E743	109 aa		2.96	□□□□□ -1.94
VMA21	YGR105W	GAL80	P04387	435 aa		2.95	□□□□□ -1.94
VMA21	YGR105W	COR1	P07256	457 aa		2.95	□□□□□ -1.94
VMA21	YGR105W	GLK1	P17709	500 aa	Known RBP	2.95	□□□□□ -1.94
VMA21	YGR105W	PRP2	P20095	876 aa	Predicted RBP	2.95	□□□□□ -1.94
VMA21	YGR105W	PEP3	P27801	918 aa		2.95	□□□□□ -1.94
VMA21	YGR105W	PAP1	P29468	568 aa	Known RBP	2.95	□□□□□ -1.94
VMA21	YGR105W	SWH1	P35845	1188 aa		2.95	□□□□□ -1.94
VMA21	YGR105W	REG2	P38232	338 aa		2.95	□□□□□ -1.94
VMA21	YGR105W	ELP2	P42935	788 aa		2.95	□□□□□ -1.94
VMA21	YGR105W	CTI6	Q08923	506 aa		2.95	□□□□□ -1.94
VMA21	YGR105W	RCN2	Q12044	265 aa		2.95	□□□□□ -1.94
VMA21	YGR105W	YER078W-A	Q3E7A2	54 aa		2.95	□□□□□ -1.94
VMA21	YGR105W	CBS1	P14066	229 aa		2.94	□□□□□ -1.94
VMA21	YGR105W	CPR1	P14832	162 aa	Known RBP	2.94	□□□□□ -1.94
VMA21	YGR105W	YME1	P32795	747 aa		2.94	□□□□□ -1.94
VMA21	YGR105W	KEL1	P38853	1164 aa	Known RBP	2.94	□□□□□ -1.94
VMA21	YGR105W	MBB1	P39534	108 aa		2.94	□□□□□ -1.94
VMA21	YGR105W	SVL3	Q03088	825 aa	Known RBP	2.94	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 93.1 ms