RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W COR1P07256 457 aa2.16□□□□□ -2.06
SMD1YGR074W HNM1P19807 563 aa2.16□□□□□ -2.06
SMD1YGR074W PRP2P20095 876 aaPredicted RBP2.16□□□□□ -2.06
SMD1YGR074W PPH22P23595 377 aa2.16□□□□□ -2.06
SMD1YGR074W CLB1P24868 471 aa2.16□□□□□ -2.06
SMD1YGR074W GID7P25569 745 aa2.16□□□□□ -2.06
SMD1YGR074W SPB1P25582 841 aaPredicted RBP2.16□□□□□ -2.06
SMD1YGR074W ADK2P26364 225 aa2.16□□□□□ -2.06
SMD1YGR074W IDH2P28241 369 aaKnown RBP2.16□□□□□ -2.06
SMD1YGR074W MGM1P32266 881 aa2.16□□□□□ -2.06
SMD1YGR074W SWI3P32591 825 aa2.16□□□□□ -2.06
SMD1YGR074W NIP100P33420 868 aa2.16□□□□□ -2.06
SMD1YGR074W MTR2P34232 184 aaKnown RBP2.16□□□□□ -2.06
SMD1YGR074W TUL1P36096 758 aa2.16□□□□□ -2.06
SMD1YGR074W MIC60P36112 540 aa2.16□□□□□ -2.06
SMD1YGR074W ARA1P38115 344 aa2.16□□□□□ -2.06
SMD1YGR074W YHR210CP38893 341 aa2.16□□□□□ -2.06
SMD1YGR074W HXT9P40885 567 aa2.16□□□□□ -2.06
SMD1YGR074W ZIM17P42844 174 aa2.16□□□□□ -2.06
SMD1YGR074W MDV1P47025 714 aa2.16□□□□□ -2.06
SMD1YGR074W YJL055WP47044 245 aa2.16□□□□□ -2.06
SMD1YGR074W YGR149WP48236 432 aa2.16□□□□□ -2.06
SMD1YGR074W PYK2P52489 506 aaKnown RBP2.16□□□□□ -2.06
SMD1YGR074W YGL138CP53122 345 aa2.16□□□□□ -2.06
SMD1YGR074W ZPR1P53303 486 aaKnown RBP2.16□□□□□ -2.06
SMD1YGR074W EAF7P53911 425 aaKnown RBP2.16□□□□□ -2.06
SMD1YGR074W IZH1Q03419 316 aa2.16□□□□□ -2.06
SMD1YGR074W ERB1Q04660 807 aaKnown RBP2.16□□□□□ -2.06
SMD1YGR074W AIM32Q04689 311 aa2.16□□□□□ -2.06
SMD1YGR074W ROY1Q04847 553 aa2.16□□□□□ -2.06
SMD1YGR074W DON1Q05610 365 aa2.16□□□□□ -2.06
SMD1YGR074W COQ9Q05779 260 aa2.16□□□□□ -2.06
SMD1YGR074W ADE13Q05911 482 aaKnown RBP2.16□□□□□ -2.06
SMD1YGR074W RTT109Q07794 436 aa2.16□□□□□ -2.06
SMD1YGR074W HSP42Q12329 375 aa2.16□□□□□ -2.06
SMD1YGR074W ARP6Q12509 438 aa2.16□□□□□ -2.06
SMD1YGR074W MDH1P17505 334 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
SMD1YGR074W EXO70P19658 623 aa2.15□□□□□ -2.07
SMD1YGR074W YME2P32843 850 aa2.15□□□□□ -2.07
SMD1YGR074W PHD1P36093 366 aa2.15□□□□□ -2.07
SMD1YGR074W TCM62P38228 572 aaKnown RBP2.15□□□□□ -2.07
SMD1YGR074W MMS4P38257 691 aa2.15□□□□□ -2.07
SMD1YGR074W ERG7P38604 731 aa2.15□□□□□ -2.07
SMD1YGR074W PHO90P39535 881 aa2.15□□□□□ -2.07
SMD1YGR074W FET5P43561 622 aa2.15□□□□□ -2.07
SMD1YGR074W CAK1P43568 368 aaPredicted RBP2.15□□□□□ -2.07
SMD1YGR074W ATG27P46989 271 aa2.15□□□□□ -2.07
SMD1YGR074W OCA1P50946 238 aaPredicted RBP2.15□□□□□ -2.07
SMD1YGR074W ALT2P52892 507 aa2.15□□□□□ -2.07
SMD1YGR074W CUL3P53202 744 aa2.15□□□□□ -2.07
SMD1YGR074W YPL014WQ02606 381 aa2.15□□□□□ -2.07
SMD1YGR074W MSC1Q03104 513 aa2.15□□□□□ -2.07
SMD1YGR074W HOT1Q03213 719 aa2.15□□□□□ -2.07
SMD1YGR074W EKI1Q03764 534 aa2.15□□□□□ -2.07
SMD1YGR074W RPC11Q04307 110 aaPredicted RBP2.15□□□□□ -2.07
SMD1YGR074W GYL1Q04322 720 aa2.15□□□□□ -2.07
SMD1YGR074W YEH2Q07950 538 aa2.15□□□□□ -2.07
SMD1YGR074W GEP3Q08622 556 aa2.15□□□□□ -2.07
SMD1YGR074W MED2Q12124 431 aa2.15□□□□□ -2.07
SMD1YGR074W UBX3Q12229 455 aa2.15□□□□□ -2.07
SMD1YGR074W HER1Q12276 1246 aa2.15□□□□□ -2.07
SMD1YGR074W CTF3Q12748 733 aa2.15□□□□□ -2.07
SMD1YGR074W LEU4P06208 619 aaKnown RBP2.14□□□□□ -2.07
SMD1YGR074W GPH1P06738 902 aaKnown RBP2.14□□□□□ -2.07
SMD1YGR074W PEP4P07267 405 aaKnown RBP2.14□□□□□ -2.07
SMD1YGR074W TYR1P20049 452 aa2.14□□□□□ -2.07
SMD1YGR074W AIM17P23180 465 aaKnown RBP2.14□□□□□ -2.07
SMD1YGR074W CPR2P23285 205 aa2.14□□□□□ -2.07
SMD1YGR074W MNE1P24720 663 aa2.14□□□□□ -2.07
SMD1YGR074W HXT3P32466 567 aaKnown RBP2.14□□□□□ -2.07
SMD1YGR074W GYP6P32806 458 aa2.14□□□□□ -2.07
SMD1YGR074W VPS17P32913 551 aa2.14□□□□□ -2.07
SMD1YGR074W RKM3P38222 552 aa2.14□□□□□ -2.07
SMD1YGR074W VHC1P38329 1120 aa2.14□□□□□ -2.07
SMD1YGR074W LRP1P38801 184 aaKnown RBP2.14□□□□□ -2.07
SMD1YGR074W GDI1P39958 451 aaKnown RBP2.14□□□□□ -2.07
SMD1YGR074W JEM1P40358 645 aa2.14□□□□□ -2.07
SMD1YGR074W PCI8P40512 444 aa2.14□□□□□ -2.07
SMD1YGR074W RTS2P40962 232 aa2.14□□□□□ -2.07
SMD1YGR074W BUD27P43573 796 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
SMD1YGR074W AIM22P47051 409 aa2.14□□□□□ -2.07
SMD1YGR074W YJR154WP47181 346 aa2.14□□□□□ -2.07
SMD1YGR074W COS5P47187 383 aa2.14□□□□□ -2.07
SMD1YGR074W YGL108CP53139 140 aa2.14□□□□□ -2.07
SMD1YGR074W PKP2P53170 491 aa2.14□□□□□ -2.07
SMD1YGR074W GPI1P53306 609 aa2.14□□□□□ -2.07
SMD1YGR074W YGR250CP53316 781 aaKnown RBP2.14□□□□□ -2.07
SMD1YGR074W HEF3P53978 1044 aaKnown RBP2.14□□□□□ -2.07
SMD1YGR074W RHO4Q00246 291 aa2.14□□□□□ -2.07
SMD1YGR074W RPA49Q01080 415 aaPredicted RBP2.14□□□□□ -2.07
SMD1YGR074W SKO1Q02100 647 aa2.14□□□□□ -2.07
SMD1YGR074W NUP100Q02629 959 aa2.14□□□□□ -2.07
SMD1YGR074W YDR131CQ03899 556 aa2.14□□□□□ -2.07
SMD1YGR074W IVY1Q04934 453 aa2.14□□□□□ -2.07
SMD1YGR074W RSF1Q05043 376 aa2.14□□□□□ -2.07
SMD1YGR074W COS7Q07788 383 aa2.14□□□□□ -2.07
SMD1YGR074W VPS54Q12071 889 aa2.14□□□□□ -2.07
SMD1YGR074W CFT2Q12102 859 aaPredicted RBP2.14□□□□□ -2.07
SMD1YGR074W CAR1P00812 333 aaKnown RBP2.13□□□□□ -2.07
SMD1YGR074W HSP82P02829 709 aaKnown RBP2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms