RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C SAN1P22470 610 aa3.28□□□□□ -1.88
PGD1YGL025C FRE1P32791 686 aa3.28□□□□□ -1.88
PGD1YGL025C SGN1P40561 250 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
PGD1YGL025C IPI3P53877 555 aa3.28□□□□□ -1.88
PGD1YGL025C CYB2P00175 591 aa3.27□□□□□ -1.89
PGD1YGL025C HEM2P05373 342 aa3.27□□□□□ -1.89
PGD1YGL025C AAC3P18238 307 aa3.27□□□□□ -1.89
PGD1YGL025C SUI2P20459 304 aaKnown RBP3.27□□□□□ -1.89
PGD1YGL025C YCR007CP25354 239 aa3.27□□□□□ -1.89
PGD1YGL025C SHP1P34223 423 aa3.27□□□□□ -1.89
PGD1YGL025C TIF5P38431 405 aaKnown RBP3.27□□□□□ -1.89
PGD1YGL025C AIM22P47051 409 aa3.27□□□□□ -1.89
PGD1YGL025C CAR1P00812 333 aaKnown RBP3.26□□□□□ -1.89
PGD1YGL025C SEC53P07283 254 aaKnown RBP3.26□□□□□ -1.89
PGD1YGL025C RPL20AP0CX23 172 aaKnown RBP3.26□□□□□ -1.89
PGD1YGL025C RPL20BP0CX24 172 aaPredicted RBP3.26□□□□□ -1.89
PGD1YGL025C SEF1P34228 1148 aa3.26□□□□□ -1.89
PGD1YGL025C PMU1P36069 295 aa3.26□□□□□ -1.89
PGD1YGL025C YBR139WP38109 508 aa3.26□□□□□ -1.89
PGD1YGL025C DUG2P38149 878 aa3.26□□□□□ -1.89
PGD1YGL025C AVT5P38176 459 aa3.26□□□□□ -1.89
PGD1YGL025C TIF4631P39935 952 aaKnown RBP3.26□□□□□ -1.89
PGD1YGL025C ALG5P40350 334 aa3.26□□□□□ -1.89
PGD1YGL025C MRX6P48564 524 aa3.26□□□□□ -1.89
PGD1YGL025C IMD4P50094 524 aaKnown RBP3.26□□□□□ -1.89
PGD1YGL025C TOF2Q02208 771 aa3.26□□□□□ -1.89
PGD1YGL025C IVY1Q04934 453 aa3.26□□□□□ -1.89
PGD1YGL025C MRPL51Q06090 140 aaPredicted RBP3.26□□□□□ -1.89
PGD1YGL025C YLL056CQ12177 298 aa3.26□□□□□ -1.89
PGD1YGL025C YJR112W-AQ3E743 109 aa3.26□□□□□ -1.89
PGD1YGL025C CBS2P14905 389 aa3.25□□□□□ -1.89
PGD1YGL025C OLE1P21147 510 aaKnown RBP3.25□□□□□ -1.89
PGD1YGL025C UTR4P32626 227 aa3.25□□□□□ -1.89
PGD1YGL025C MSN2P33748 704 aa3.25□□□□□ -1.89
PGD1YGL025C TCD2P36101 447 aaKnown RBP3.25□□□□□ -1.89
PGD1YGL025C TCM62P38228 572 aaKnown RBP3.25□□□□□ -1.89
PGD1YGL025C PCA1P38360 1216 aa3.25□□□□□ -1.89
PGD1YGL025C NPR2P39923 615 aa3.25□□□□□ -1.89
PGD1YGL025C HAT2P39984 401 aa3.25□□□□□ -1.89
PGD1YGL025C ALK1P43633 760 aaKnown RBP3.25□□□□□ -1.89
PGD1YGL025C VID30P53076 958 aa3.25□□□□□ -1.89
PGD1YGL025C PHO92Q06390 306 aa3.25□□□□□ -1.89
PGD1YGL025C THP1Q08231 455 aa3.25□□□□□ -1.89
PGD1YGL025C RSA1Q08932 381 aa3.25□□□□□ -1.89
PGD1YGL025C RLM1Q12224 676 aa3.25□□□□□ -1.89
PGD1YGL025C ENT1Q12518 454 aa3.25□□□□□ -1.89
PGD1YGL025C SDS24P38314 527 aa3.24□□□□□ -1.89
PGD1YGL025C MSR1P38714 643 aa3.24□□□□□ -1.89
PGD1YGL025C SHO1P40073 367 aa3.24□□□□□ -1.89
PGD1YGL025C IDP2P41939 412 aa3.24□□□□□ -1.89
PGD1YGL025C CTI6Q08923 506 aa3.24□□□□□ -1.89
PGD1YGL025C LSP1Q12230 341 aaKnown RBP3.24□□□□□ -1.89
PGD1YGL025C ATR1P13090 542 aa3.23□□□□□ -1.89
PGD1YGL025C PRP2P20095 876 aaPredicted RBP3.23□□□□□ -1.89
PGD1YGL025C RNA14P25298 677 aaKnown RBP3.23□□□□□ -1.89
PGD1YGL025C PRD1P25375 712 aa3.23□□□□□ -1.89
PGD1YGL025C NOP4P37838 685 aaKnown RBP3.23□□□□□ -1.89
PGD1YGL025C BNA4P38169 460 aa3.23□□□□□ -1.89
PGD1YGL025C ALG8P40351 577 aa3.23□□□□□ -1.89
PGD1YGL025C YJL132WP47014 750 aa3.23□□□□□ -1.89
PGD1YGL025C HEF3P53978 1044 aaKnown RBP3.23□□□□□ -1.89
PGD1YGL025C IRC15Q02733 499 aa3.23□□□□□ -1.89
PGD1YGL025C RCN2Q12044 265 aa3.23□□□□□ -1.89
PGD1YGL025C CTF3Q12748 733 aa3.23□□□□□ -1.89
PGD1YGL025C WBP1P33767 430 aaKnown RBP3.22□□□□□ -1.89
PGD1YGL025C TUL1P36096 758 aa3.22□□□□□ -1.89
PGD1YGL025C MUM2P38236 366 aa3.22□□□□□ -1.89
PGD1YGL025C KEL1P38853 1164 aaKnown RBP3.22□□□□□ -1.89
PGD1YGL025C ZPR1P53303 486 aaKnown RBP3.22□□□□□ -1.89
PGD1YGL025C WSC2P53832 503 aa3.22□□□□□ -1.89
PGD1YGL025C FIN1Q03898 291 aa3.22□□□□□ -1.89
PGD1YGL025C RBS1Q05672 457 aaKnown RBP3.22□□□□□ -1.89
PGD1YGL025C VPS38Q05919 439 aa3.22□□□□□ -1.89
PGD1YGL025C VPS74Q06385 345 aa3.22□□□□□ -1.89
PGD1YGL025C KEL3Q08979 651 aaPredicted RBP3.22□□□□□ -1.89
PGD1YGL025C CFT2Q12102 859 aaPredicted RBP3.22□□□□□ -1.89
PGD1YGL025C RKM5Q12367 367 aa3.22□□□□□ -1.89
PGD1YGL025C AVL9Q12500 764 aa3.22□□□□□ -1.89
PGD1YGL025C YCL021W-AQ96VH3 125 aa3.22□□□□□ -1.89
PGD1YGL025C GAL80P04387 435 aa3.21□□□□□ -1.9
PGD1YGL025C PMR1P13586 950 aa3.21□□□□□ -1.9
PGD1YGL025C CBS1P14066 229 aa3.21□□□□□ -1.9
PGD1YGL025C GLK1P17709 500 aaKnown RBP3.21□□□□□ -1.9
PGD1YGL025C PUT3P25502 979 aaPredicted RBP3.21□□□□□ -1.9
PGD1YGL025C SPG5P42933 373 aa3.21□□□□□ -1.9
PGD1YGL025C YPI1P43587 155 aa3.21□□□□□ -1.9
PGD1YGL025C YGR066CP53242 292 aa3.21□□□□□ -1.9
PGD1YGL025C GPI1P53306 609 aa3.21□□□□□ -1.9
PGD1YGL025C VPS75P53853 264 aa3.21□□□□□ -1.9
PGD1YGL025C COR1P07256 457 aa3.2□□□□□ -1.9
PGD1YGL025C GFD2P25370 566 aaKnown RBP3.2□□□□□ -1.9
PGD1YGL025C PEP3P27801 918 aa3.2□□□□□ -1.9
PGD1YGL025C PAP1P29468 568 aaKnown RBP3.2□□□□□ -1.9
PGD1YGL025C REG2P38232 338 aa3.2□□□□□ -1.9
PGD1YGL025C MBB1P39534 108 aa3.2□□□□□ -1.9
PGD1YGL025C TMA108P40462 946 aa3.2□□□□□ -1.9
PGD1YGL025C GWT1P47026 490 aa3.2□□□□□ -1.9
PGD1YGL025C MSO1P53604 210 aaKnown RBP3.2□□□□□ -1.9
PGD1YGL025C ARE2P53629 642 aaKnown RBP3.2□□□□□ -1.9
PGD1YGL025C ARK1P53974 638 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms