RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W FIN1Q03898 291 aa3.66□□□□□ -1.82
RPN9YDR427W ERP1Q05359 219 aaKnown RBP3.66□□□□□ -1.82
RPN9YDR427W VPS38Q05919 439 aa3.66□□□□□ -1.82
RPN9YDR427W SYO1Q07395 620 aa3.66□□□□□ -1.82
RPN9YDR427W RLM1Q12224 676 aa3.66□□□□□ -1.82
RPN9YDR427W AVL9Q12500 764 aa3.66□□□□□ -1.82
RPN9YDR427W YBR298C-AQ8TGK4 73 aa3.66□□□□□ -1.82
RPN9YDR427W GCN4P03069 281 aa3.65□□□□□ -1.83
RPN9YDR427W RPL15AP05748 204 aaKnown RBP3.65□□□□□ -1.83
RPN9YDR427W DFR1P07807 211 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
RPN9YDR427W PRP2P20095 876 aaPredicted RBP3.65□□□□□ -1.83
RPN9YDR427W YCR007CP25354 239 aa3.65□□□□□ -1.83
RPN9YDR427W WBP1P33767 430 aaKnown RBP3.65□□□□□ -1.83
RPN9YDR427W SHP1P34223 423 aa3.65□□□□□ -1.83
RPN9YDR427W MSR1P38714 643 aa3.65□□□□□ -1.83
RPN9YDR427W ALK1P43633 760 aaKnown RBP3.65□□□□□ -1.83
RPN9YDR427W SLD5Q03406 294 aa3.65□□□□□ -1.83
RPN9YDR427W SMA2Q04658 369 aa3.65□□□□□ -1.83
RPN9YDR427W YDL057WQ07379 328 aa3.65□□□□□ -1.83
RPN9YDR427W HSH49Q99181 213 aaPredicted RBP3.65□□□□□ -1.83
RPN9YDR427W MRE11P32829 692 aa3.64□□□□□ -1.83
RPN9YDR427W DUG2P38149 878 aa3.64□□□□□ -1.83
RPN9YDR427W REG2P38232 338 aa3.64□□□□□ -1.83
RPN9YDR427W VPS52P39904 641 aa3.64□□□□□ -1.83
RPN9YDR427W TIF4631P39935 952 aaKnown RBP3.64□□□□□ -1.83
RPN9YDR427W COS10P52924 374 aa3.64□□□□□ -1.83
RPN9YDR427W SUB1P54000 292 aaKnown RBP3.64□□□□□ -1.83
RPN9YDR427W TIP41Q12199 356 aa3.64□□□□□ -1.83
RPN9YDR427W GAL80P04387 435 aa3.63□□□□□ -1.83
RPN9YDR427W HSC82P15108 705 aaKnown RBP3.63□□□□□ -1.83
RPN9YDR427W PEP3P27801 918 aa3.63□□□□□ -1.83
RPN9YDR427W ATS1P31386 333 aa3.63□□□□□ -1.83
RPN9YDR427W SPC110P32380 944 aa3.63□□□□□ -1.83
RPN9YDR427W NDC1P32500 655 aa3.63□□□□□ -1.83
RPN9YDR427W UTR4P32626 227 aa3.63□□□□□ -1.83
RPN9YDR427W MSN2P33748 704 aa3.63□□□□□ -1.83
RPN9YDR427W YNK1P36010 153 aaKnown RBP3.63□□□□□ -1.83
RPN9YDR427W TCM62P38228 572 aaKnown RBP3.63□□□□□ -1.83
RPN9YDR427W YEL057CP39983 233 aa3.63□□□□□ -1.83
RPN9YDR427W SCD6P45978 349 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
RPN9YDR427W RTT101P47050 842 aa3.63□□□□□ -1.83
RPN9YDR427W THP1Q08231 455 aa3.63□□□□□ -1.83
RPN9YDR427W YDL009CQ12210 107 aa3.63□□□□□ -1.83
RPN9YDR427W PRP16P15938 1071 aaPredicted RBP3.62□□□□□ -1.83
RPN9YDR427W SRO77P38163 1010 aa3.62□□□□□ -1.83
RPN9YDR427W MDM31P38880 579 aa3.62□□□□□ -1.83
RPN9YDR427W RPR2P40571 144 aa3.62□□□□□ -1.83
RPN9YDR427W YDL186WP48568 277 aa3.62□□□□□ -1.83
RPN9YDR427W HEF3P53978 1044 aaKnown RBP3.62□□□□□ -1.83
RPN9YDR427W RLI1Q03195 608 aaKnown RBP3.62□□□□□ -1.83
RPN9YDR427W MFB1Q04922 465 aa3.62□□□□□ -1.83
RPN9YDR427W PPT2Q12036 173 aa3.62□□□□□ -1.83
RPN9YDR427W MTF1P14908 341 aaKnown RBP3.61□□□□□ -1.83
RPN9YDR427W OCA4P25366 362 aa3.61□□□□□ -1.83
RPN9YDR427W PRO3P32263 286 aaKnown RBP3.61□□□□□ -1.83
RPN9YDR427W FRE1P32791 686 aa3.61□□□□□ -1.83
RPN9YDR427W BNA4P38169 460 aa3.61□□□□□ -1.83
RPN9YDR427W RPH1P39956 796 aa3.61□□□□□ -1.83
RPN9YDR427W SPO22P40511 975 aa3.61□□□□□ -1.83
RPN9YDR427W YFR016CP43597 1233 aaKnown RBP3.61□□□□□ -1.83
RPN9YDR427W PET130P47065 347 aa3.61□□□□□ -1.83
RPN9YDR427W SLG1P54867 378 aa3.61□□□□□ -1.83
RPN9YDR427W IVY1Q04934 453 aa3.61□□□□□ -1.83
RPN9YDR427W MRPL51Q06090 140 aaPredicted RBP3.61□□□□□ -1.83
RPN9YDR427W SEC39Q12745 709 aa3.61□□□□□ -1.83
RPN9YDR427W YCR022CP25620 114 aa3.6□□□□□ -1.83
RPN9YDR427W BUD14P27637 709 aa3.6□□□□□ -1.83
RPN9YDR427W PAP1P29468 568 aaKnown RBP3.6□□□□□ -1.83
RPN9YDR427W PTR2P32901 601 aa3.6□□□□□ -1.83
RPN9YDR427W KRE9P39005 276 aa3.6□□□□□ -1.83
RPN9YDR427W MBB1P39534 108 aa3.6□□□□□ -1.83
RPN9YDR427W ROK1P45818 564 aaPredicted RBP3.6□□□□□ -1.83
RPN9YDR427W IMP4P53941 290 aaKnown RBP3.6□□□□□ -1.83
RPN9YDR427W TIM10P87108 93 aa3.6□□□□□ -1.83
RPN9YDR427W PHO92Q06390 306 aa3.6□□□□□ -1.83
RPN9YDR427W KEL3Q08979 651 aaPredicted RBP3.6□□□□□ -1.83
RPN9YDR427W AYT1Q12226 474 aa3.6□□□□□ -1.83
RPN9YDR427W LSP1Q12230 341 aaKnown RBP3.6□□□□□ -1.83
RPN9YDR427W SET6Q12529 373 aa3.6□□□□□ -1.83
RPN9YDR427W FOB1O13329 566 aa3.59□□□□□ -1.83
RPN9YDR427W CAR1P00812 333 aaKnown RBP3.59□□□□□ -1.83
RPN9YDR427W ARG3P05150 338 aa3.59□□□□□ -1.83
RPN9YDR427W COR1P07256 457 aa3.59□□□□□ -1.83
RPN9YDR427W MCK1P21965 375 aaKnown RBP3.59□□□□□ -1.83
RPN9YDR427W YME1P32795 747 aa3.59□□□□□ -1.83
RPN9YDR427W MTC4P38335 694 aaKnown RBP3.59□□□□□ -1.83
RPN9YDR427W YMR147WP40218 223 aaKnown RBP3.59□□□□□ -1.83
RPN9YDR427W RBG2P53295 368 aaKnown RBP3.59□□□□□ -1.83
RPN9YDR427W ZPR1P53303 486 aaKnown RBP3.59□□□□□ -1.83
RPN9YDR427W RBS1Q05672 457 aaKnown RBP3.59□□□□□ -1.83
RPN9YDR427W CFT2Q12102 859 aaPredicted RBP3.59□□□□□ -1.83
RPN9YDR427W YDL007C-AQ2V2Q0 85 aa3.59□□□□□ -1.83
RPN9YDR427W GDH1P07262 454 aaKnown RBP3.58□□□□□ -1.84
RPN9YDR427W GLK1P17709 500 aaKnown RBP3.58□□□□□ -1.84
RPN9YDR427W ATP11P32453 318 aa3.58□□□□□ -1.84
RPN9YDR427W KEL1P38853 1164 aaKnown RBP3.58□□□□□ -1.84
RPN9YDR427W NAB3P38996 802 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
RPN9YDR427W HAT2P39984 401 aa3.58□□□□□ -1.84
RPN9YDR427W ESL1P40456 1118 aa3.58□□□□□ -1.84
RPN9YDR427W MET18P40469 1032 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms