RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W CLP1Q08685 445 aaPredicted RBP3.29□□□□□ -1.88
SIZ1YDR409W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
SIZ1YDR409W TGS1Q12052 315 aa3.29□□□□□ -1.88
SIZ1YDR409W YOR342CQ12182 319 aa3.29□□□□□ -1.88
SIZ1YDR409W RPN5Q12250 445 aaKnown RBP3.29□□□□□ -1.88
SIZ1YDR409W VCX1Q99385 411 aa3.29□□□□□ -1.88
SIZ1YDR409W BI3Q9ZZW7 517 aa3.29□□□□□ -1.88
SIZ1YDR409W GSC2P40989 1895 aa3.29□□□□□ -1.88
SIZ1YDR409W TEF1P02994 458 aaKnown RBP3.29□□□□□ -1.88
SIZ1YDR409W FBP1P09201 348 aa3.29□□□□□ -1.88
SIZ1YDR409W PRP28P23394 588 aa3.29□□□□□ -1.88
SIZ1YDR409W RPS5P26783 225 aaKnown RBP3.29□□□□□ -1.88
SIZ1YDR409W ACH1P32316 526 aa3.29□□□□□ -1.88
SIZ1YDR409W SRP101P32916 621 aa3.29□□□□□ -1.88
SIZ1YDR409W TYE7P33122 291 aaPredicted RBP3.29□□□□□ -1.88
SIZ1YDR409W MKS1P34072 584 aa3.29□□□□□ -1.88
SIZ1YDR409W CST26P38226 397 aa3.29□□□□□ -1.88
SIZ1YDR409W YHR112CP38716 378 aa3.29□□□□□ -1.88
SIZ1YDR409W MUP3P38734 546 aa3.29□□□□□ -1.88
SIZ1YDR409W VPS45P38932 577 aa3.29□□□□□ -1.88
SIZ1YDR409W SER3P40054 469 aa3.29□□□□□ -1.88
SIZ1YDR409W SCC4P40090 624 aa3.29□□□□□ -1.88
SIZ1YDR409W UBP7P40453 1071 aa3.29□□□□□ -1.88
SIZ1YDR409W YIL077CP40508 320 aa3.29□□□□□ -1.88
SIZ1YDR409W SWP82P43554 623 aa3.29□□□□□ -1.88
SIZ1YDR409W ALT2P52892 507 aa3.29□□□□□ -1.88
SIZ1YDR409W RKM2Q03942 479 aa3.29□□□□□ -1.88
SIZ1YDR409W IVY1Q04934 453 aa3.29□□□□□ -1.88
SIZ1YDR409W ASM4Q05166 528 aa3.29□□□□□ -1.88
SIZ1YDR409W RKM1Q08961 583 aaPredicted RBP3.29□□□□□ -1.88
SIZ1YDR409W SUL2Q12325 893 aa3.29□□□□□ -1.88
SIZ1YDR409W ADF1Q2V2Q1 113 aa3.29□□□□□ -1.88
SIZ1YDR409W YLR278CQ05854 1341 aa3.29□□□□□ -1.88
SIZ1YDR409W REP1P03871 373 aa3.28□□□□□ -1.88
SIZ1YDR409W CTT1P06115 562 aa3.28□□□□□ -1.88
SIZ1YDR409W PRB1P09232 635 aa3.28□□□□□ -1.88
SIZ1YDR409W IMA3P0CW40 589 aa3.28□□□□□ -1.88
SIZ1YDR409W IMA4P0CW41 589 aa3.28□□□□□ -1.88
SIZ1YDR409W MSS116P15424 664 aaKnown RBP3.28□□□□□ -1.88
SIZ1YDR409W STF2P16965 84 aa3.28□□□□□ -1.88
SIZ1YDR409W RNR1P21524 888 aaKnown RBP3.28□□□□□ -1.88
SIZ1YDR409W DAL2P25335 343 aa3.28□□□□□ -1.88
SIZ1YDR409W GBP2P25555 427 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
SIZ1YDR409W FUN30P31380 1131 aa3.28□□□□□ -1.88
SIZ1YDR409W TMT1P32643 299 aa3.28□□□□□ -1.88
SIZ1YDR409W YSC83P32792 385 aa3.28□□□□□ -1.88
SIZ1YDR409W VMA22P38784 181 aa3.28□□□□□ -1.88
SIZ1YDR409W SHC1P39000 512 aa3.28□□□□□ -1.88
SIZ1YDR409W SEO1P39709 593 aa3.28□□□□□ -1.88
SIZ1YDR409W GID8P40208 455 aa3.28□□□□□ -1.88
SIZ1YDR409W LSB6P42951 607 aa3.28□□□□□ -1.88
SIZ1YDR409W FAR3P46671 204 aa3.28□□□□□ -1.88
SIZ1YDR409W ARC1P46672 376 aaKnown RBP3.28□□□□□ -1.88
SIZ1YDR409W TAM41P53230 385 aa3.28□□□□□ -1.88
SIZ1YDR409W YET2Q04210 160 aa3.28□□□□□ -1.88
SIZ1YDR409W SPC2Q04969 178 aa3.28□□□□□ -1.88
SIZ1YDR409W SPH1Q06160 661 aa3.28□□□□□ -1.88
SIZ1YDR409W IMA2Q08295 589 aa3.28□□□□□ -1.88
SIZ1YDR409W SGO1Q08490 590 aa3.28□□□□□ -1.88
SIZ1YDR409W RCN2Q12044 265 aa3.28□□□□□ -1.88
SIZ1YDR409W STE2D6VTK4 431 aa3.28□□□□□ -1.88
SIZ1YDR409W RPS9AO13516 197 aaKnown RBP3.28□□□□□ -1.88
SIZ1YDR409W CDC4P07834 779 aa3.28□□□□□ -1.88
SIZ1YDR409W RPL1AP0CX43 217 aaKnown RBP3.28□□□□□ -1.88
SIZ1YDR409W RPL1BP0CX44 217 aaKnown RBP3.28□□□□□ -1.88
SIZ1YDR409W HMG2P12684 1045 aa3.28□□□□□ -1.88
SIZ1YDR409W SNF4P12904 322 aa3.28□□□□□ -1.88
SIZ1YDR409W DAT1P13483 248 aaKnown RBP3.28□□□□□ -1.88
SIZ1YDR409W POL30P15873 258 aaKnown RBP3.28□□□□□ -1.88
SIZ1YDR409W VPS33P20795 691 aa3.28□□□□□ -1.88
SIZ1YDR409W YCR061WP25639 631 aa3.28□□□□□ -1.88
SIZ1YDR409W VPS17P32913 551 aa3.28□□□□□ -1.88
SIZ1YDR409W CSG2P35206 410 aa3.28□□□□□ -1.88
SIZ1YDR409W DED81P38707 554 aaKnown RBP3.28□□□□□ -1.88
SIZ1YDR409W GPB2P39717 880 aa3.28□□□□□ -1.88
SIZ1YDR409W DSE1P40077 573 aa3.28□□□□□ -1.88
SIZ1YDR409W MRK1P50873 501 aa3.28□□□□□ -1.88
SIZ1YDR409W LSG1P53145 640 aaKnown RBP3.28□□□□□ -1.88
SIZ1YDR409W DIP5P53388 608 aa3.28□□□□□ -1.88
SIZ1YDR409W COP1P53622 1201 aaKnown RBP3.28□□□□□ -1.88
SIZ1YDR409W CSL4P53859 292 aaPredicted RBP3.28□□□□□ -1.88
SIZ1YDR409W RNY1Q02933 434 aaKnown RBP3.28□□□□□ -1.88
SIZ1YDR409W VBA4Q04602 768 aaKnown RBP3.28□□□□□ -1.88
SIZ1YDR409W UIP4Q08926 304 aa3.28□□□□□ -1.88
SIZ1YDR409W AI5_ALPHAQ9ZZX1 630 aa3.28□□□□□ -1.88
SIZ1YDR409W HSP30P25619 332 aa3.28□□□□□ -1.89
SIZ1YDR409W AAR2P32357 355 aaPredicted RBP3.28□□□□□ -1.89
SIZ1YDR409W MAE1P36013 669 aaKnown RBP3.28□□□□□ -1.89
SIZ1YDR409W YPK3P38070 525 aa3.28□□□□□ -1.89
SIZ1YDR409W EHT1P38295 451 aa3.28□□□□□ -1.89
SIZ1YDR409W NDT80P38830 627 aa3.28□□□□□ -1.89
SIZ1YDR409W AVT6P40074 448 aa3.28□□□□□ -1.89
SIZ1YDR409W PEP8P40335 379 aa3.28□□□□□ -1.89
SIZ1YDR409W ROK1P45818 564 aaPredicted RBP3.28□□□□□ -1.89
SIZ1YDR409W PSP2P50109 593 aaKnown RBP3.28□□□□□ -1.89
SIZ1YDR409W TIM21P53220 239 aa3.28□□□□□ -1.89
SIZ1YDR409W SKI8Q02793 397 aaPredicted RBP3.28□□□□□ -1.89
SIZ1YDR409W THI7Q05998 598 aa3.28□□□□□ -1.89
SIZ1YDR409W SEC10Q06245 871 aa3.28□□□□□ -1.89
SIZ1YDR409W CDA1Q06702 301 aa3.28□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms