RNA–Protein interactions for RNA: YDR295C

HDA2, Transcript of Subunit of the HDA1 histone deacetylase complex, yeastyeast

Gene HDA2, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA2YDR295C GDA1P32621 518 aa3.5□□□□□ -1.85
HDA2YDR295C CBF5P33322 483 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
HDA2YDR295C CMC1P36064 111 aa3.5□□□□□ -1.85
HDA2YDR295C CUE2P36075 443 aaKnown RBP3.5□□□□□ -1.85
HDA2YDR295C MAL33P38157 468 aa3.5□□□□□ -1.85
HDA2YDR295C SLM4P38247 162 aa3.5□□□□□ -1.85
HDA2YDR295C SIP3P38717 1229 aa3.5□□□□□ -1.85
HDA2YDR295C MLH1P38920 769 aa3.5□□□□□ -1.85
HDA2YDR295C SSO2P39926 295 aa3.5□□□□□ -1.85
HDA2YDR295C YGL117WP53133 265 aa3.5□□□□□ -1.85
HDA2YDR295C KTR6P54070 446 aa3.5□□□□□ -1.85
HDA2YDR295C RPN9Q04062 393 aaKnown RBP3.5□□□□□ -1.85
HDA2YDR295C RBS1Q05672 457 aaKnown RBP3.5□□□□□ -1.85
HDA2YDR295C BCP1Q06338 283 aa3.5□□□□□ -1.85
HDA2YDR295C MRH1Q12117 320 aaPredicted RBP3.5□□□□□ -1.85
HDA2YDR295C LYS21Q12122 440 aaKnown RBP3.5□□□□□ -1.85
HDA2YDR295C RAD61Q99359 647 aa3.5□□□□□ -1.85
HDA2YDR295C AAC1P04710 309 aa3.49□□□□□ -1.85
HDA2YDR295C HXK2P04807 486 aaKnown RBP3.49□□□□□ -1.85
HDA2YDR295C PRP2P20095 876 aaPredicted RBP3.49□□□□□ -1.85
HDA2YDR295C BOS1P25385 244 aa3.49□□□□□ -1.85
HDA2YDR295C MEI5P32489 222 aa3.49□□□□□ -1.85
HDA2YDR295C SEC66P33754 206 aa3.49□□□□□ -1.85
HDA2YDR295C YBL055CP34220 418 aaPredicted RBP3.49□□□□□ -1.85
HDA2YDR295C MRPL4P36517 319 aa3.49□□□□□ -1.85
HDA2YDR295C SER3P40054 469 aa3.49□□□□□ -1.85
HDA2YDR295C YTA12P40341 825 aa3.49□□□□□ -1.85
HDA2YDR295C MSS2P40990 351 aa3.49□□□□□ -1.85
HDA2YDR295C YFR018CP43599 363 aa3.49□□□□□ -1.85
HDA2YDR295C ASN1P49089 572 aaKnown RBP3.49□□□□□ -1.85
HDA2YDR295C YGL138CP53122 345 aa3.49□□□□□ -1.85
HDA2YDR295C MPP6P53725 186 aaPredicted RBP3.49□□□□□ -1.85
HDA2YDR295C UBP16Q02863 499 aa3.49□□□□□ -1.85
HDA2YDR295C YDR239CQ03780 787 aa3.49□□□□□ -1.85
HDA2YDR295C ATC1Q04005 294 aa3.49□□□□□ -1.85
HDA2YDR295C RPC11Q04307 110 aaPredicted RBP3.49□□□□□ -1.85
HDA2YDR295C RTN1Q04947 295 aaKnown RBP3.49□□□□□ -1.85
HDA2YDR295C YDL242WQ07746 117 aa3.49□□□□□ -1.85
HDA2YDR295C YDR061WQ12298 539 aa3.49□□□□□ -1.85
HDA2YDR295C MDM20Q12387 796 aaKnown RBP3.49□□□□□ -1.85
HDA2YDR295C HIP1P06775 603 aa3.49□□□□□ -1.85
HDA2YDR295C YML003WP0CF16 290 aa3.49□□□□□ -1.85
HDA2YDR295C MSS116P15424 664 aaKnown RBP3.49□□□□□ -1.85
HDA2YDR295C UBA1P22515 1024 aaKnown RBP3.49□□□□□ -1.85
HDA2YDR295C ERG1P32476 496 aaKnown RBP3.49□□□□□ -1.85
HDA2YDR295C RML2P32611 393 aa3.49□□□□□ -1.85
HDA2YDR295C YME2P32843 850 aa3.49□□□□□ -1.85
HDA2YDR295C YKR015CP36111 568 aa3.49□□□□□ -1.85
HDA2YDR295C STV1P37296 890 aa3.49□□□□□ -1.85
HDA2YDR295C KTR3P38130 404 aaPredicted RBP3.49□□□□□ -1.85
HDA2YDR295C STN1P38960 494 aa3.49□□□□□ -1.85
HDA2YDR295C YHB1P39676 399 aaKnown RBP3.49□□□□□ -1.85
HDA2YDR295C GCD14P46959 383 aaPredicted RBP3.49□□□□□ -1.85
HDA2YDR295C FMS1P50264 508 aa3.49□□□□□ -1.85
HDA2YDR295C PNC1P53184 216 aaKnown RBP3.49□□□□□ -1.85
HDA2YDR295C YGR079WP53249 370 aa3.49□□□□□ -1.85
HDA2YDR295C TWF1P53250 332 aa3.49□□□□□ -1.85
HDA2YDR295C COQ6P53318 479 aa3.49□□□□□ -1.85
HDA2YDR295C PGA2P53903 129 aa3.49□□□□□ -1.85
HDA2YDR295C YNL144CP53907 740 aa3.49□□□□□ -1.85
HDA2YDR295C YML037CQ03703 340 aa3.49□□□□□ -1.85
HDA2YDR295C RRB1Q04225 511 aaKnown RBP3.49□□□□□ -1.85
HDA2YDR295C CSI1Q04368 295 aa3.49□□□□□ -1.85
HDA2YDR295C VPS38Q05919 439 aa3.49□□□□□ -1.85
HDA2YDR295C YLR455WQ06188 304 aa3.49□□□□□ -1.85
HDA2YDR295C YLR173WQ06247 608 aa3.49□□□□□ -1.85
HDA2YDR295C GGA1Q06336 557 aa3.49□□□□□ -1.85
HDA2YDR295C ETT1Q08421 412 aaKnown RBP3.49□□□□□ -1.85
HDA2YDR295C SLK19Q08581 821 aaKnown RBP3.49□□□□□ -1.85
HDA2YDR295C GIS3Q12418 502 aa3.49□□□□□ -1.85
HDA2YDR295C ZPS1Q12512 249 aa3.49□□□□□ -1.85
HDA2YDR295C YBR255C-AQ3E776 120 aa3.49□□□□□ -1.85
HDA2YDR295C STE2D6VTK4 431 aa3.48□□□□□ -1.85
HDA2YDR295C CBP1P07252 654 aa3.48□□□□□ -1.85
HDA2YDR295C KIN3P22209 435 aa3.48□□□□□ -1.85
HDA2YDR295C ITR1P30605 584 aa3.48□□□□□ -1.85
HDA2YDR295C HXT3P32466 567 aaKnown RBP3.48□□□□□ -1.85
HDA2YDR295C OAR1P35731 278 aa3.48□□□□□ -1.85
HDA2YDR295C YKL070WP36087 169 aa3.48□□□□□ -1.85
HDA2YDR295C TCD1P38756 429 aa3.48□□□□□ -1.85
HDA2YDR295C SCC4P40090 624 aa3.48□□□□□ -1.85
HDA2YDR295C ALG5P40350 334 aa3.48□□□□□ -1.85
HDA2YDR295C PET130P47065 347 aa3.48□□□□□ -1.85
HDA2YDR295C ECM27P47144 725 aa3.48□□□□□ -1.85
HDA2YDR295C RTC4P53850 401 aa3.48□□□□□ -1.85
HDA2YDR295C UTP6Q02354 440 aaKnown RBP3.48□□□□□ -1.85
HDA2YDR295C VTA1Q06263 330 aa3.48□□□□□ -1.85
HDA2YDR295C TGS1Q12052 315 aa3.48□□□□□ -1.85
HDA2YDR295C LCB4Q12246 624 aa3.48□□□□□ -1.85
HDA2YDR295C SUT2Q12286 268 aa3.48□□□□□ -1.85
HDA2YDR295C ERG27Q12452 347 aaKnown RBP3.48□□□□□ -1.85
HDA2YDR295C SFG1Q12507 346 aa3.48□□□□□ -1.85
HDA2YDR295C RTC1Q08281 1341 aa3.48□□□□□ -1.85
HDA2YDR295C GAL80P04387 435 aa3.48□□□□□ -1.85
HDA2YDR295C CDC36P06100 191 aaPredicted RBP3.48□□□□□ -1.85
HDA2YDR295C STE3P06783 470 aa3.48□□□□□ -1.85
HDA2YDR295C FUS3P16892 353 aaKnown RBP3.48□□□□□ -1.85
HDA2YDR295C RPI1P23250 407 aaKnown RBP3.48□□□□□ -1.85
HDA2YDR295C MCM4P30665 933 aaKnown RBP3.48□□□□□ -1.85
HDA2YDR295C NDI1P32340 513 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 221 ms