RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	SPT3	P06844	337 aa		5.62	□□□□□ -1.51
ATG12	YBR217W	RPS21A	P0C0V8	87 aa	Known RBP	5.62	□□□□□ -1.51
ATG12	YBR217W	PDC5	P16467	563 aa	Known RBP	5.62	□□□□□ -1.51
ATG12	YBR217W	STE4	P18851	423 aa		5.62	□□□□□ -1.51
ATG12	YBR217W	MSB1	P21339	1137 aa	Known RBP	5.62	□□□□□ -1.51
ATG12	YBR217W	DAL82	P21705	255 aa		5.62	□□□□□ -1.51
ATG12	YBR217W	PTP1	P25044	335 aa		5.62	□□□□□ -1.51
ATG12	YBR217W	HEM3	P28789	327 aa		5.62	□□□□□ -1.51
ATG12	YBR217W	CRM1	P30822	1084 aa	Known RBP	5.62	□□□□□ -1.51
ATG12	YBR217W	HOG1	P32485	435 aa		5.62	□□□□□ -1.51
ATG12	YBR217W	LTV1	P34078	463 aa		5.62	□□□□□ -1.51
ATG12	YBR217W	EAP1	P36041	632 aa	Known RBP	5.62	□□□□□ -1.51
ATG12	YBR217W	STS1	P38637	319 aa		5.62	□□□□□ -1.51
ATG12	YBR217W	SEC31	P38968	1273 aa	Known RBP	5.62	□□□□□ -1.51
ATG12	YBR217W	MET30	P39014	640 aa		5.62	□□□□□ -1.51
ATG12	YBR217W	SEC27	P41811	889 aa	Known RBP	5.62	□□□□□ -1.51
ATG12	YBR217W	RIM21	P48565	533 aa		5.62	□□□□□ -1.51
ATG12	YBR217W	RCF2	P53721	224 aa		5.62	□□□□□ -1.51
ATG12	YBR217W	YNL058C	P53947	316 aa		5.62	□□□□□ -1.51
ATG12	YBR217W	RRP45	Q05636	305 aa	Known RBP	5.62	□□□□□ -1.51
ATG12	YBR217W	DIC1	Q06143	298 aa		5.62	□□□□□ -1.51
ATG12	YBR217W	HDA3	Q06623	655 aa		5.62	□□□□□ -1.51
ATG12	YBR217W	YOL107W	Q12239	342 aa		5.62	□□□□□ -1.51
ATG12	YBR217W	RRP42	Q12277	265 aa	Predicted RBP	5.62	□□□□□ -1.51
ATG12	YBR217W	SPE4	Q12455	300 aa		5.62	□□□□□ -1.51
ATG12	YBR217W	GCN1	P33892	2672 aa	Known RBP	5.62	□□□□□ -1.51
ATG12	YBR217W	RHO2	P06781	192 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	GAL7	P08431	366 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	CUP1-1	P0CX80	61 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	CUP1-2	P0CX81	61 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	LAT1	P12695	482 aa	Known RBP	5.61	□□□□□ -1.51
ATG12	YBR217W	HSC82	P15108	705 aa	Known RBP	5.61	□□□□□ -1.51
ATG12	YBR217W	FUR1	P18562	216 aa	Known RBP	5.61	□□□□□ -1.51
ATG12	YBR217W	TYR1	P20049	452 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	SEC15	P22224	910 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	YCR006C	P25350	157 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	AGP1	P25376	633 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	BUB3	P26449	341 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	MLS1	P30952	554 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	HXT4	P32467	576 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.61	□□□□□ -1.51	not detected
ATG12	YBR217W	SQT1	P35184	431 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	UTP9	P38882	575 aa	Known RBP	5.61	□□□□□ -1.51
ATG12	YBR217W	GGC1	P38988	300 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	HXT6	P39003	570 aa	Known RBP	5.61	□□□□□ -1.51
ATG12	YBR217W	HXT7	P39004	570 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	YGL176C	P46945	554 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	YJR154W	P47181	346 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	YPT32	P51996	222 aa	Known RBP	5.61	□□□□□ -1.51
ATG12	YBR217W	ESF2	P53743	316 aa	Known RBP	5.61	□□□□□ -1.51
ATG12	YBR217W	MRS2	Q01926	470 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	RNT1	Q02555	471 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	GAS3	Q03655	524 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	VHS1	Q03785	461 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	SIZ1	Q04195	904 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	YOL073C	Q08232	322 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	GPB1	Q08886	897 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	YPL245W	Q12179	454 aa	Known RBP	5.61	□□□□□ -1.51
ATG12	YBR217W	MHT1	Q12525	324 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	LAG2	Q92325	660 aa		5.61	□□□□□ -1.51
ATG12	YBR217W	NMT1	P14743	455 aa		5.6	□□□□□ -1.51
ATG12	YBR217W	PRP6	P19735	899 aa	Predicted RBP	5.6	□□□□□ -1.51
ATG12	YBR217W	SFA1	P32771	386 aa		5.6	□□□□□ -1.51
ATG12	YBR217W	KKQ8	P36004	724 aa		5.6	□□□□□ -1.51
ATG12	YBR217W	CBP4	P37267	147 aa		5.6	□□□□□ -1.51
ATG12	YBR217W	RRN10	P38204	145 aa		5.6	□□□□□ -1.51
ATG12	YBR217W	EHT1	P38295	451 aa		5.6	□□□□□ -1.51
ATG12	YBR217W	SHU2	P38957	223 aa		5.6	□□□□□ -1.51
ATG12	YBR217W	VRG4	P40107	337 aa		5.6	□□□□□ -1.51
ATG12	YBR217W	CAB2	P40506	365 aa		5.6	□□□□□ -1.51
ATG12	YBR217W	RTS3	P53289	263 aa		5.6	□□□□□ -1.51
ATG12	YBR217W	GTR2	P53290	341 aa		5.6	□□□□□ -1.51
ATG12	YBR217W	YML131W	Q03102	365 aa		5.6	□□□□□ -1.51
ATG12	YBR217W	ROY1	Q04847	553 aa		5.6	□□□□□ -1.51
ATG12	YBR217W	YLR030W	Q07967	263 aa		5.6	□□□□□ -1.51
ATG12	YBR217W	GUP2	Q08929	609 aa		5.6	□□□□□ -1.51
ATG12	YBR217W	YLR049C	Q12110	428 aa		5.6	□□□□□ -1.51
ATG12	YBR217W	AHA1	Q12449	350 aa	Known RBP	5.6	□□□□□ -1.51
ATG12	YBR217W	NOP58	Q12499	511 aa	Known RBP	5.6	□□□□□ -1.51
ATG12	YBR217W	PRP8	P33334	2413 aa	Known RBP	5.59	□□□□□ -1.51
ATG12	YBR217W	LEU4	P06208	619 aa	Known RBP	5.59	□□□□□ -1.51
ATG12	YBR217W	COS2	P0CX12	379 aa		5.59	□□□□□ -1.51
ATG12	YBR217W	COS3	P0CX13	379 aa		5.59	□□□□□ -1.51
ATG12	YBR217W	SGV1	P23293	657 aa	Known RBP	5.59	□□□□□ -1.51
ATG12	YBR217W	TRX3	P25372	127 aa		5.59	□□□□□ -1.51
ATG12	YBR217W	IMG1	P25626	169 aa		5.59	□□□□□ -1.51
ATG12	YBR217W	PRO1	P32264	428 aa		5.59	□□□□□ -1.51
ATG12	YBR217W	NTH1	P32356	751 aa		5.59	□□□□□ -1.51
ATG12	YBR217W	PDR3	P33200	976 aa		5.59	□□□□□ -1.51
ATG12	YBR217W	RPS1A	P33442	255 aa	Known RBP	5.59	□□□□□ -1.51
ATG12	YBR217W	RMA1	P36001	430 aa	Known RBP	5.59	□□□□□ -1.51
ATG12	YBR217W	ARB1	P40024	610 aa	Known RBP	5.59	□□□□□ -1.51
ATG12	YBR217W	FKH2	P41813	862 aa		5.59	□□□□□ -1.51
ATG12	YBR217W	GCD10	P41814	478 aa		5.59	□□□□□ -1.51
ATG12	YBR217W	SPG5	P42933	373 aa		5.59	□□□□□ -1.51
ATG12	YBR217W	COS4	P43542	379 aa		5.59	□□□□□ -1.51
ATG12	YBR217W	ARC1	P46672	376 aa	Known RBP	5.59	□□□□□ -1.51
ATG12	YBR217W	YNR021W	P53723	404 aa	Known RBP	5.59	□□□□□ -1.51
ATG12	YBR217W	SLM2	P53955	656 aa		5.59	□□□□□ -1.51
ATG12	YBR217W	TVP15	Q03860	143 aa		5.59	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms