RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR48, Length 113 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR48	snR48	HIM1	Q06674	414 aa		0.64	□□□□□ -2.31
snR48	snR48	RPS10A	Q08745	105 aa	Predicted RBP	0.64	□□□□□ -2.31
snR48	snR48	THP3	Q12049	470 aa	Known RBP	0.64	□□□□□ -2.31
snR48	snR48	PRB1	P09232	635 aa		0.63	□□□□□ -2.31
snR48	snR48	CLB4	P24871	460 aa		0.63	□□□□□ -2.31
snR48	snR48	MRPL10	P36520	322 aa		0.63	□□□□□ -2.31
snR48	snR48	BUR6	P40096	142 aa		0.63	□□□□□ -2.31
snR48	snR48	GWT1	P47026	490 aa		0.63	□□□□□ -2.31
snR48	snR48	HST1	P53685	503 aa		0.63	□□□□□ -2.31
snR48	snR48	BSC5	P53755	489 aa		0.63	□□□□□ -2.31
snR48	snR48	GOR1	P53839	350 aa		0.63	□□□□□ -2.31
snR48	snR48	SLD5	Q03406	294 aa		0.63	□□□□□ -2.31
snR48	snR48	YPQ1	Q12010	308 aa		0.63	□□□□□ -2.31
snR48	snR48	YLR108C	Q12259	485 aa		0.63	□□□□□ -2.31
snR48	snR48	COX17	Q12287	69 aa		0.63	□□□□□ -2.31
snR48	snR48	ERG27	Q12452	347 aa	Known RBP	0.63	□□□□□ -2.31
snR48	snR48	YOR019W	Q99248	730 aa		0.63	□□□□□ -2.31
snR48	snR48	PIF1	P07271	859 aa		0.62	□□□□□ -2.31
snR48	snR48	TY2A-LR1	P0C2J4	438 aa		0.62	□□□□□ -2.31
snR48	snR48	TY2A-F	P0CX61	438 aa		0.62	□□□□□ -2.31
snR48	snR48	TY2A-GR2	P0CX62	438 aa		0.62	□□□□□ -2.31
snR48	snR48	TY2A-C	P25383	438 aa		0.62	□□□□□ -2.31
snR48	snR48	SNU114	P36048	1008 aa	Known RBP	0.62	□□□□□ -2.31
snR48	snR48	TSC10	P38342	320 aa		0.62	□□□□□ -2.31
snR48	snR48	ALT2	P52892	507 aa		0.62	□□□□□ -2.31
snR48	snR48	ERG26	P53199	349 aa	Known RBP	0.62	□□□□□ -2.31
snR48	snR48	BUD32	P53323	261 aa		0.62	□□□□□ -2.31
snR48	snR48	CPR6	P53691	371 aa	Known RBP	0.62	□□□□□ -2.31
snR48	snR48	TY2A-DR2	Q03483	438 aa		0.62	□□□□□ -2.31
snR48	snR48	RSN1	Q03516	953 aa		0.62	□□□□□ -2.31
snR48	snR48	VHS1	Q03785	461 aa		0.62	□□□□□ -2.31
snR48	snR48	ECM11	Q04110	302 aa		0.62	□□□□□ -2.31
snR48	snR48	BNA5	Q05979	453 aa		0.62	□□□□□ -2.31
snR48	snR48	MLC2	Q06580	163 aa		0.62	□□□□□ -2.31
snR48	snR48	TY2A-B	Q12260	438 aa		0.62	□□□□□ -2.31
snR48	snR48	TY2A-OR2	Q12293	438 aa		0.62	□□□□□ -2.31
snR48	snR48	TY2A-DR1	Q12392	438 aa		0.62	□□□□□ -2.31
snR48	snR48	TY2A-OR1	Q12439	438 aa		0.62	□□□□□ -2.31
snR48	snR48	TY2A-DR3	Q99303	438 aa		0.62	□□□□□ -2.31
snR48	snR48	PEP5	P12868	1029 aa		0.61	□□□□□ -2.31
snR48	snR48	NCP1	P16603	691 aa	Known RBP	0.61	□□□□□ -2.31
snR48	snR48	EXO70	P19658	623 aa		0.61	□□□□□ -2.31
snR48	snR48	FPR3	P38911	411 aa	Known RBP	0.61	□□□□□ -2.31
snR48	snR48	CHS6	P40955	746 aa		0.61	□□□□□ -2.31
snR48	snR48	IVY1	Q04934	453 aa		0.61	□□□□□ -2.31
snR48	snR48	EIS1	Q05050	843 aa	Known RBP	0.61	□□□□□ -2.31
snR48	snR48	TEN1	Q07921	160 aa		0.61	□□□□□ -2.31
snR48	snR48	LSP1	Q12230	341 aa	Known RBP	0.61	□□□□□ -2.31
snR48	snR48	YRM1	Q12340	786 aa		0.61	□□□□□ -2.31
snR48	snR48	TPK1	P06244	397 aa		0.6	□□□□□ -2.31
snR48	snR48	MTR2	P34232	184 aa	Known RBP	0.6	□□□□□ -2.31
snR48	snR48	YHR131C	P38835	850 aa		0.6	□□□□□ -2.31
snR48	snR48	UIP3	P39547	235 aa		0.6	□□□□□ -2.31
snR48	snR48	SPC72	P39723	622 aa		0.6	□□□□□ -2.31
snR48	snR48	NCA3	P46955	337 aa		0.6	□□□□□ -2.31
snR48	snR48	SGM1	P47166	707 aa		0.6	□□□□□ -2.31
snR48	snR48	CSL4	P53859	292 aa	Predicted RBP	0.6	□□□□□ -2.31
snR48	snR48	PCD1	Q12524	340 aa		0.6	□□□□□ -2.31
snR48	snR48	YBR085C-A	O43137	85 aa		0.59	□□□□□ -2.31
snR48	snR48	SST2	P11972	698 aa	Known RBP	0.59	□□□□□ -2.31
snR48	snR48	KKQ8	P36004	724 aa		0.59	□□□□□ -2.31
snR48	snR48	YKL023W	P36103	277 aa	Known RBP	0.59	□□□□□ -2.31
snR48	snR48	MRPL36	P36531	177 aa		0.59	□□□□□ -2.31
snR48	snR48	DUG2	P38149	878 aa		0.59	□□□□□ -2.31
snR48	snR48	ELO1	P39540	310 aa		0.59	□□□□□ -2.31
snR48	snR48	PUG1	P40100	303 aa		0.59	□□□□□ -2.31
snR48	snR48	PRM5	P40476	318 aa		0.59	□□□□□ -2.31
snR48	snR48	SEC24	P40482	926 aa	Known RBP	0.59	□□□□□ -2.31
snR48	snR48	IME4	P41833	600 aa		0.59	□□□□□ -2.31
snR48	snR48	AVT4	P50944	713 aa		0.59	□□□□□ -2.31
snR48	snR48	CFT2	Q12102	859 aa	Predicted RBP	0.59	□□□□□ -2.31
snR48	snR48	NKP1	Q12493	238 aa		0.59	□□□□□ -2.31
snR48	snR48	YCR007C	P25354	239 aa		0.58	□□□□□ -2.32
snR48	snR48	MNS1	P32906	549 aa		0.58	□□□□□ -2.32
snR48	snR48	DIA4	P38705	446 aa	Predicted RBP	0.58	□□□□□ -2.32
snR48	snR48	TIM17	P39515	158 aa		0.58	□□□□□ -2.32
snR48	snR48	SEO1	P39709	593 aa		0.58	□□□□□ -2.32
snR48	snR48	VPS27	P40343	622 aa	Known RBP	0.58	□□□□□ -2.32
snR48	snR48	PSF2	P40359	213 aa		0.58	□□□□□ -2.32
snR48	snR48	IST3	P40565	148 aa	Predicted RBP	0.58	□□□□□ -2.32
snR48	snR48	PTR3	P43606	678 aa		0.58	□□□□□ -2.32
snR48	snR48	YJR085C	P47131	105 aa	Known RBP	0.58	□□□□□ -2.32
snR48	snR48	RPS7B	P48164	190 aa	Known RBP	0.58	□□□□□ -2.32
snR48	snR48	REG1	Q00816	1014 aa		0.58	□□□□□ -2.32
snR48	snR48	LEU9	Q12166	604 aa	Known RBP	0.58	□□□□□ -2.32
snR48	snR48	SAL1	D6W196	494 aa		0.57	□□□□□ -2.32
snR48	snR48	RPS8A	P0CX39	200 aa	Known RBP	0.57	□□□□□ -2.32
snR48	snR48	RPS8B	P0CX40	200 aa	Known RBP	0.57	□□□□□ -2.32
snR48	snR48	ERG8	P24521	451 aa		0.57	□□□□□ -2.32
snR48	snR48	RAD16	P31244	790 aa		0.57	□□□□□ -2.32
snR48	snR48	NDI1	P32340	513 aa		0.57	□□□□□ -2.32
snR48	snR48	NUP2	P32499	720 aa		0.57	□□□□□ -2.32
snR48	snR48	FMT1	P32785	401 aa		0.57	□□□□□ -2.32
snR48	snR48	YKL100C	P34248	587 aa		0.57	□□□□□ -2.32
snR48	snR48	RSM22	P36056	628 aa		0.57	□□□□□ -2.32
snR48	snR48	MSG5	P38590	489 aa		0.57	□□□□□ -2.32
snR48	snR48	RCK2	P38623	610 aa		0.57	□□□□□ -2.32
snR48	snR48	FAU1	P40099	211 aa		0.57	□□□□□ -2.32
snR48	snR48	DIA3	P52290	468 aa		0.57	□□□□□ -2.32
snR48	snR48	DSD1	P53095	428 aa		0.57	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms