RNA–Protein interactions for RNA: YPL260W

YPL260W, Transcript of Putative substrate of cAMP-dependent protein kinase (PKA), yeast

Gene YPL260W, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPL260W	YPL260W	FOL1	P53848	824 aa		4.38	□□□□□ -1.71
YPL260W	YPL260W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
YPL260W	YPL260W	SNX41	Q04053	625 aa		4.38	□□□□□ -1.71
YPL260W	YPL260W	SIZ1	Q04195	904 aa		4.38	□□□□□ -1.71
YPL260W	YPL260W	APC4	Q04601	652 aa		4.38	□□□□□ -1.71
YPL260W	YPL260W	FAR10	Q06001	478 aa		4.38	□□□□□ -1.71
YPL260W	YPL260W	GMC2	Q06201	188 aa		4.38	□□□□□ -1.71
YPL260W	YPL260W	SPO75	Q07798	868 aa		4.38	□□□□□ -1.71
YPL260W	YPL260W	BDS1	Q08347	646 aa		4.38	□□□□□ -1.71
YPL260W	YPL260W	DIA2	Q08496	732 aa	Predicted RBP	4.38	□□□□□ -1.71
YPL260W	YPL260W	YPL216W	Q08964	1102 aa		4.38	□□□□□ -1.71
YPL260W	YPL260W	MMP1	Q12372	583 aa		4.38	□□□□□ -1.71
YPL260W	YPL260W	RPN6	Q12377	434 aa		4.38	□□□□□ -1.71
YPL260W	YPL260W	STB3	Q12427	513 aa		4.38	□□□□□ -1.71
YPL260W	YPL260W	PTC5	Q12511	572 aa		4.38	□□□□□ -1.71
YPL260W	YPL260W	UBR1	P19812	1950 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	TY4B-H	P0C2J7	1802 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	TY4B-J	P47024	1803 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	INH1	P01097	85 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	STF1	P01098	86 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	GCN4	P03069	281 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	REP2	P03872	296 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	KIN28	P06242	306 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	STE3	P06783	470 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	MOD5	P07884	428 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	ZWF1	P11412	505 aa	Known RBP	4.37	□□□□□ -1.71
YPL260W	YPL260W	OM45	P16547	393 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	RNA15	P25299	296 aa	Predicted RBP	4.37	□□□□□ -1.71
YPL260W	YPL260W	NDI1	P32340	513 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	CYS4	P32582	507 aa	Known RBP	4.37	□□□□□ -1.71
YPL260W	YPL260W	KAP122	P32767	1081 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	MRP4	P32902	394 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	PDR3	P33200	976 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
YPL260W	YPL260W	PEX32	P38292	413 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	POP4	P38336	279 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	COS8	P38723	381 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	PAN5	P38787	379 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	AIM18	P38884	321 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	CRG1	P38892	291 aa	RIP-Chip data	4.37	□□□□□ -1.71	not detected
YPL260W	YPL260W	LYS9	P38999	446 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	FHL1	P39521	936 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	ZIM17	P42844	174 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	NUP42	P49686	430 aa	Known RBP	4.37	□□□□□ -1.71
YPL260W	YPL260W	ORC5	P50874	479 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	SPT20	P50875	604 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	DOC1	P53068	250 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	TPN1	P53099	579 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	AIM14	P53109	570 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	NAN1	Q02931	896 aa	Known RBP	4.37	□□□□□ -1.71
YPL260W	YPL260W	PEX25	Q02969	394 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	EAR1	Q03212	550 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	ADI1	Q03677	179 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	REH1	Q06709	432 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	DIB1	Q06819	143 aa	Predicted RBP	4.37	□□□□□ -1.71
YPL260W	YPL260W	ULA1	Q12059	462 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	REC8	Q12188	680 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	HAT1	Q12341	374 aa		4.37	□□□□□ -1.71
YPL260W	YPL260W	GPH1	P06738	902 aa	Known RBP	4.36	□□□□□ -1.71
YPL260W	YPL260W	GCR1	P07261	785 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	SEC53	P07283	254 aa	Known RBP	4.36	□□□□□ -1.71
YPL260W	YPL260W	FBA1	P14540	359 aa	Known RBP	4.36	□□□□□ -1.71
YPL260W	YPL260W	PUT4	P15380	627 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	SLY1	P22213	666 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	SAN1	P22470	610 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	GIT1	P25346	518 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	CDC50	P25656	391 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	MCM5	P29496	775 aa	Known RBP	4.36	□□□□□ -1.71
YPL260W	YPL260W	FUN26	P31381	517 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	IMP2'	P32351	346 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	SRB2	P34162	210 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	SEF1	P34228	1148 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	CTP1	P38152	299 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	DED81	P38707	554 aa	Known RBP	4.36	□□□□□ -1.71
YPL260W	YPL260W	EGD2	P38879	174 aa	Known RBP	4.36	□□□□□ -1.71
YPL260W	YPL260W	RGI2	P40188	164 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	YKE4	P40544	346 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	HXT8	P40886	569 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	YJL107C	P42947	387 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	GUF1	P46943	645 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	GTO1	P48239	356 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	ART5	P53244	586 aa	Known RBP	4.36	□□□□□ -1.71
YPL260W	YPL260W	RNH70	P53331	553 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	NIS1	P53939	407 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	OCA2	P53949	197 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	YCL001W-A	P87012	153 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	MTD1	Q02046	320 aa	Known RBP	4.36	□□□□□ -1.71
YPL260W	YPL260W	RSN1	Q03516	953 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	BUL2	Q03758	920 aa	Known RBP	4.36	□□□□□ -1.71
YPL260W	YPL260W	ATG16	Q03818	150 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	MUS81	Q04149	632 aa	Predicted RBP	4.36	□□□□□ -1.71
YPL260W	YPL260W	PLM2	Q04383	521 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	KAR5	Q04746	504 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	RTN1	Q04947	295 aa	Known RBP	4.36	□□□□□ -1.71
YPL260W	YPL260W	YLR297W	Q05899	129 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	BOP2	Q06150	570 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	HDA3	Q06623	655 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	YPR078C	Q06813	372 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	ACM1	Q08981	209 aa		4.36	□□□□□ -1.71
YPL260W	YPL260W	DIN7	Q12086	430 aa		4.36	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 37 ms