RNA–Protein interactions for RNA: YOR343W-A

YOR343W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YOR343W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-AYOR343W-A ARD1P07347 238 aaPredicted RBP2.89□□□□□ -1.95
YOR343W-AYOR343W-A KAR3P17119 729 aa2.89□□□□□ -1.95
YOR343W-AYOR343W-A KGD1P20967 1014 aaKnown RBP2.89□□□□□ -1.95
YOR343W-AYOR343W-A PRE8P23639 250 aa2.89□□□□□ -1.95
YOR343W-AYOR343W-A SGF29P25554 259 aa2.89□□□□□ -1.95
YOR343W-AYOR343W-A IMG1P25626 169 aa2.89□□□□□ -1.95
YOR343W-AYOR343W-A TIF3P34167 436 aaKnown RBP2.89□□□□□ -1.95
YOR343W-AYOR343W-A VPS52P39904 641 aa2.89□□□□□ -1.95
YOR343W-AYOR343W-A SNG1P46950 547 aa2.89□□□□□ -1.95
YOR343W-AYOR343W-A APT1P49435 187 aaKnown RBP2.89□□□□□ -1.95
YOR343W-AYOR343W-A MSC1Q03104 513 aa2.89□□□□□ -1.95
YOR343W-AYOR343W-A YML037CQ03703 340 aa2.89□□□□□ -1.95
YOR343W-AYOR343W-A ERP1Q05359 219 aaKnown RBP2.89□□□□□ -1.95
YOR343W-AYOR343W-A MF(ALPHA)1P01149 165 aa2.88□□□□□ -1.95
YOR343W-AYOR343W-A BOS1P25385 244 aa2.88□□□□□ -1.95
YOR343W-AYOR343W-A YKL023WP36103 277 aaKnown RBP2.88□□□□□ -1.95
YOR343W-AYOR343W-A PTR3P43606 678 aa2.88□□□□□ -1.95
YOR343W-AYOR343W-A FAR3P46671 204 aa2.88□□□□□ -1.95
YOR343W-AYOR343W-A YGR127WP53275 312 aa2.88□□□□□ -1.95
YOR343W-AYOR343W-A BUD32P53323 261 aa2.88□□□□□ -1.95
YOR343W-AYOR343W-A SDH5Q08230 162 aa2.88□□□□□ -1.95
YOR343W-AYOR343W-A YPL272CQ08984 517 aa2.88□□□□□ -1.95
YOR343W-AYOR343W-A RPL19AP0CX82 189 aaKnown RBP2.87□□□□□ -1.95
YOR343W-AYOR343W-A RPL19BP0CX83 189 aaPredicted RBP2.87□□□□□ -1.95
YOR343W-AYOR343W-A APE1P14904 514 aa2.87□□□□□ -1.95
YOR343W-AYOR343W-A MCK1P21965 375 aaKnown RBP2.87□□□□□ -1.95
YOR343W-AYOR343W-A RER1P25560 188 aa2.87□□□□□ -1.95
YOR343W-AYOR343W-A SPC110P32380 944 aa2.87□□□□□ -1.95
YOR343W-AYOR343W-A MTC4P38335 694 aaKnown RBP2.87□□□□□ -1.95
YOR343W-AYOR343W-A PCA1P38360 1216 aa2.87□□□□□ -1.95
YOR343W-AYOR343W-A CSM2P40465 213 aa2.87□□□□□ -1.95
YOR343W-AYOR343W-A YPI1P43587 155 aa2.87□□□□□ -1.95
YOR343W-AYOR343W-A YFR016CP43597 1233 aaKnown RBP2.87□□□□□ -1.95
YOR343W-AYOR343W-A RTS3P53289 263 aa2.87□□□□□ -1.95
YOR343W-AYOR343W-A GLO2Q05584 274 aa2.87□□□□□ -1.95
YOR343W-AYOR343W-A SGS1P35187 1447 aa2.86□□□□□ -1.95
YOR343W-AYOR343W-A CAR1P00812 333 aaKnown RBP2.86□□□□□ -1.95
YOR343W-AYOR343W-A PEP5P12868 1029 aa2.86□□□□□ -1.95
YOR343W-AYOR343W-A AMD1P15274 810 aaKnown RBP2.86□□□□□ -1.95
YOR343W-AYOR343W-A SUI2P20459 304 aaKnown RBP2.86□□□□□ -1.95
YOR343W-AYOR343W-A YIH1P25637 258 aa2.86□□□□□ -1.95
YOR343W-AYOR343W-A SWH1P35845 1188 aa2.86□□□□□ -1.95
YOR343W-AYOR343W-A AUR1P36107 401 aaPredicted RBP2.86□□□□□ -1.95
YOR343W-AYOR343W-A RPL32P38061 130 aaKnown RBP2.86□□□□□ -1.95
YOR343W-AYOR343W-A ICS2P38284 255 aa2.86□□□□□ -1.95
YOR343W-AYOR343W-A TIF5P38431 405 aaKnown RBP2.86□□□□□ -1.95
YOR343W-AYOR343W-A OSH3P38713 996 aaKnown RBP2.86□□□□□ -1.95
YOR343W-AYOR343W-A AFG3P39925 761 aa2.86□□□□□ -1.95
YOR343W-AYOR343W-A LYS14P40971 790 aa2.86□□□□□ -1.95
YOR343W-AYOR343W-A ALT2P52892 507 aa2.86□□□□□ -1.95
YOR343W-AYOR343W-A DSD1P53095 428 aa2.86□□□□□ -1.95
YOR343W-AYOR343W-A YGR126WP53274 230 aa2.86□□□□□ -1.95
YOR343W-AYOR343W-A MEP3P53390 489 aa2.86□□□□□ -1.95
YOR343W-AYOR343W-A SHR3Q02774 210 aa2.86□□□□□ -1.95
YOR343W-AYOR343W-A RLI1Q03195 608 aaKnown RBP2.86□□□□□ -1.95
YOR343W-AYOR343W-A BUD22Q04347 519 aaKnown RBP2.86□□□□□ -1.95
YOR343W-AYOR343W-A AYT1Q12226 474 aa2.86□□□□□ -1.95
YOR343W-AYOR343W-A SPE4Q12455 300 aa2.86□□□□□ -1.95
YOR343W-AYOR343W-A HEM2P05373 342 aa2.85□□□□□ -1.95
YOR343W-AYOR343W-A RPL20AP0CX23 172 aaKnown RBP2.85□□□□□ -1.95
YOR343W-AYOR343W-A RPL20BP0CX24 172 aaPredicted RBP2.85□□□□□ -1.95
YOR343W-AYOR343W-A TRX2P22803 104 aaKnown RBP2.85□□□□□ -1.95
YOR343W-AYOR343W-A POL4P25615 582 aa2.85□□□□□ -1.95
YOR343W-AYOR343W-A CHS3P29465 1165 aa2.85□□□□□ -1.95
YOR343W-AYOR343W-A SSE2P32590 693 aaKnown RBP2.85□□□□□ -1.95
YOR343W-AYOR343W-A FRE1P32791 686 aa2.85□□□□□ -1.95
YOR343W-AYOR343W-A CIN4P39110 191 aa2.85□□□□□ -1.95
YOR343W-AYOR343W-A SCD6P45978 349 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
YOR343W-AYOR343W-A YJL132WP47014 750 aa2.85□□□□□ -1.95
YOR343W-AYOR343W-A YJR154WP47181 346 aa2.85□□□□□ -1.95
YOR343W-AYOR343W-A SHE10P53075 577 aa2.85□□□□□ -1.95
YOR343W-AYOR343W-A LCL3P53153 274 aa2.85□□□□□ -1.95
YOR343W-AYOR343W-A DRN1P53255 507 aaKnown RBP2.85□□□□□ -1.95
YOR343W-AYOR343W-A YMR018WQ04364 514 aa2.85□□□□□ -1.95
YOR343W-AYOR343W-A YKU80Q04437 629 aa2.85□□□□□ -1.95
YOR343W-AYOR343W-A LUC7Q07508 261 aaPredicted RBP2.85□□□□□ -1.95
YOR343W-AYOR343W-A YBR144CP34215 104 aa2.84□□□□□ -1.96
YOR343W-AYOR343W-A FAA2P39518 744 aa2.84□□□□□ -1.96
YOR343W-AYOR343W-A YEL068CP39977 110 aa2.84□□□□□ -1.96
YOR343W-AYOR343W-A OPY2Q06810 360 aa2.84□□□□□ -1.96
YOR343W-AYOR343W-A YDL057WQ07379 328 aa2.84□□□□□ -1.96
YOR343W-AYOR343W-A YOR365CQ08844 703 aa2.84□□□□□ -1.96
YOR343W-AYOR343W-A FMP40Q08968 688 aaPredicted RBP2.84□□□□□ -1.96
YOR343W-AYOR343W-A NCE102Q12207 173 aaRIP-Chip data2.84□□□□□ -1.96not detected
YOR343W-AYOR343W-A YDL009CQ12210 107 aa2.84□□□□□ -1.96
YOR343W-AYOR343W-A CDC16P09798 840 aa2.83□□□□□ -1.96
YOR343W-AYOR343W-A YCK1P23291 538 aa2.83□□□□□ -1.96
YOR343W-AYOR343W-A LDB16P25587 256 aa2.83□□□□□ -1.96
YOR343W-AYOR343W-A UBP11P36026 717 aa2.83□□□□□ -1.96
YOR343W-AYOR343W-A MRPL4P36517 319 aa2.83□□□□□ -1.96
YOR343W-AYOR343W-A YBL029WP38201 376 aa2.83□□□□□ -1.96
YOR343W-AYOR343W-A YHR210CP38893 341 aa2.83□□□□□ -1.96
YOR343W-AYOR343W-A CCT6P39079 546 aa2.83□□□□□ -1.96
YOR343W-AYOR343W-A MKT1P40850 830 aaKnown RBP2.83□□□□□ -1.96
YOR343W-AYOR343W-A IVY1Q04934 453 aa2.83□□□□□ -1.96
YOR343W-AYOR343W-A BNA5Q05979 453 aa2.83□□□□□ -1.96
YOR343W-AYOR343W-A SYO1Q07395 620 aa2.83□□□□□ -1.96
YOR343W-AYOR343W-A RAD52P06778 471 aaKnown RBP2.82□□□□□ -1.96
YOR343W-AYOR343W-A PEP4P07267 405 aaKnown RBP2.82□□□□□ -1.96
YOR343W-AYOR343W-A MRP13P12686 339 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms