RNA–Protein interactions for RNA: YNL082W

PMS1, Transcript of ATP-binding protein required for mismatch repair, yeast

Gene PMS1, Length 2,622 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMS1	YNL082W	ECM27	P47144	725 aa		4.14	□□□□□ -1.75
PMS1	YNL082W	FMS1	P50264	508 aa		4.14	□□□□□ -1.75
PMS1	YNL082W	DPB4	Q04603	196 aa	Known RBP	4.14	□□□□□ -1.75
PMS1	YNL082W	GPM3	Q12326	303 aa		4.14	□□□□□ -1.75
PMS1	YNL082W	HAP1	P0CE41	1502 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	CLB2	P24869	491 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	ADH7	P25377	361 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	SOF1	P33750	489 aa	Known RBP	4.13	□□□□□ -1.75
PMS1	YNL082W	AGP2	P38090	596 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	PES4	P39684	611 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	JEM1	P40358	645 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	STB2	P46679	850 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	NNF2	P53253	936 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	YDR239C	Q03780	787 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	FIN1	Q03898	291 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	ISA2	Q12425	185 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	PDH1	Q12428	516 aa	Known RBP	4.13	□□□□□ -1.75
PMS1	YNL082W	YDL007C-A	Q2V2Q0	85 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	DNF3	Q12674	1656 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	YMR084W	A2P2R3	262 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	HXK2	P04807	486 aa	Known RBP	4.13	□□□□□ -1.75
PMS1	YNL082W	DAL5	P15365	543 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	IMG1	P25626	169 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
PMS1	YNL082W	SEF1	P34228	1148 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	MTR2	P34232	184 aa	Known RBP	4.13	□□□□□ -1.75
PMS1	YNL082W	DIA3	P52290	468 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	PYK2	P52489	506 aa	Known RBP	4.13	□□□□□ -1.75
PMS1	YNL082W	PKP2	P53170	491 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	TEN1	Q07921	160 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	KEL3	Q08979	651 aa	Predicted RBP	4.13	□□□□□ -1.75
PMS1	YNL082W	ULA1	Q12059	462 aa		4.13	□□□□□ -1.75
PMS1	YNL082W	ART10	P18634	518 aa	Known RBP	4.12	□□□□□ -1.75
PMS1	YNL082W	HXT14	P42833	540 aa		4.12	□□□□□ -1.75
PMS1	YNL082W	HOT1	Q03213	719 aa		4.12	□□□□□ -1.75
PMS1	YNL082W	SPE3	Q12074	293 aa	Known RBP	4.12	□□□□□ -1.75
PMS1	YNL082W	FRE7	Q12333	620 aa		4.12	□□□□□ -1.75
PMS1	YNL082W	AFI1	Q99222	893 aa		4.12	□□□□□ -1.75
PMS1	YNL082W	GAL4	P04386	881 aa		4.12	□□□□□ -1.75
PMS1	YNL082W	LHS1	P36016	881 aa		4.12	□□□□□ -1.75
PMS1	YNL082W	HEL1	P36113	551 aa		4.12	□□□□□ -1.75
PMS1	YNL082W	LEU5	P38702	357 aa		4.12	□□□□□ -1.75
PMS1	YNL082W	MRX1	P40050	688 aa		4.12	□□□□□ -1.75
PMS1	YNL082W	DLD2	P46681	530 aa	Known RBP	4.12	□□□□□ -1.75
PMS1	YNL082W	LYS20	P48570	428 aa	Known RBP	4.12	□□□□□ -1.75
PMS1	YNL082W	VID30	P53076	958 aa		4.12	□□□□□ -1.75
PMS1	YNL082W	GFD1	Q04839	188 aa	Known RBP	4.12	□□□□□ -1.75
PMS1	YNL082W	CUE5	Q08412	411 aa	Known RBP	4.12	□□□□□ -1.75
PMS1	YNL082W	SEC39	Q12745	709 aa		4.12	□□□□□ -1.75
PMS1	YNL082W	NUP1	P20676	1076 aa		4.11	□□□□□ -1.75
PMS1	YNL082W	KIN3	P22209	435 aa		4.11	□□□□□ -1.75
PMS1	YNL082W	CLB3	P24870	427 aa		4.11	□□□□□ -1.75
PMS1	YNL082W	SAT4	P25333	603 aa	Known RBP	4.11	□□□□□ -1.75
PMS1	YNL082W	CDC15	P27636	974 aa		4.11	□□□□□ -1.75
PMS1	YNL082W	IDH2	P28241	369 aa	Known RBP	4.11	□□□□□ -1.75
PMS1	YNL082W	YIM1	P28625	365 aa		4.11	□□□□□ -1.75
PMS1	YNL082W	FTH1	P38310	465 aa		4.11	□□□□□ -1.75
PMS1	YNL082W	CAJ1	P39101	391 aa		4.11	□□□□□ -1.75
PMS1	YNL082W	ALG5	P40350	334 aa		4.11	□□□□□ -1.75
PMS1	YNL082W	IST1	P53843	298 aa	Predicted RBP	4.11	□□□□□ -1.75
PMS1	YNL082W	PIG1	Q06216	648 aa		4.11	□□□□□ -1.75
PMS1	YNL082W	HBT1	Q07653	1046 aa	Known RBP	4.11	□□□□□ -1.75
PMS1	YNL082W	UAF30	Q08747	228 aa		4.11	□□□□□ -1.75
PMS1	YNL082W	CPR2	P23285	205 aa		4.11	□□□□□ -1.75
PMS1	YNL082W	FLO10	P36170	1169 aa		4.11	□□□□□ -1.75
PMS1	YNL082W	ASG1	P40467	964 aa		4.11	□□□□□ -1.75
PMS1	YNL082W	NAS2	P40555	220 aa		4.11	□□□□□ -1.75
PMS1	YNL082W	THI3	Q07471	609 aa		4.11	□□□□□ -1.75
PMS1	YNL082W	FRE3	Q08905	711 aa		4.11	□□□□□ -1.75
PMS1	YNL082W	PEP4	P07267	405 aa	Known RBP	4.1	□□□□□ -1.75
PMS1	YNL082W	RPS2	P25443	254 aa	Known RBP	4.1	□□□□□ -1.75
PMS1	YNL082W	MDL1	P33310	695 aa		4.1	□□□□□ -1.75
PMS1	YNL082W	RRT2	P38332	387 aa		4.1	□□□□□ -1.75
PMS1	YNL082W	YEL020C	P39994	560 aa		4.1	□□□□□ -1.75
PMS1	YNL082W	LEU9	Q12166	604 aa	Known RBP	4.1	□□□□□ -1.75
PMS1	YNL082W	IQG1	Q12280	1495 aa		4.1	□□□□□ -1.75
PMS1	YNL082W	RPL3	P14126	387 aa	Known RBP	4.1	□□□□□ -1.75
PMS1	YNL082W	PPH22	P23595	377 aa		4.1	□□□□□ -1.75
PMS1	YNL082W	MSR1	P38714	643 aa		4.1	□□□□□ -1.75
PMS1	YNL082W	PAC2	P39937	518 aa		4.1	□□□□□ -1.75
PMS1	YNL082W	SSU1	P41930	458 aa		4.1	□□□□□ -1.75
PMS1	YNL082W	STU2	P46675	888 aa		4.1	□□□□□ -1.75
PMS1	YNL082W	ART5	P53244	586 aa	Known RBP	4.1	□□□□□ -1.75
PMS1	YNL082W	CTF4	Q01454	927 aa		4.1	□□□□□ -1.75
PMS1	YNL082W	RDL1	Q12305	139 aa	Known RBP	4.1	□□□□□ -1.75
PMS1	YNL082W	CBP1	P07252	654 aa		4.09	□□□□□ -1.75
PMS1	YNL082W	ILV2	P07342	687 aa	Known RBP	4.09	□□□□□ -1.75
PMS1	YNL082W	ANP1	P32629	500 aa		4.09	□□□□□ -1.75
PMS1	YNL082W	YIL060W	P40519	144 aa		4.09	□□□□□ -1.75
PMS1	YNL082W	NET1	P47035	1189 aa		4.09	□□□□□ -1.75
PMS1	YNL082W	SMC3	P47037	1230 aa		4.09	□□□□□ -1.75
PMS1	YNL082W	MEH1	Q02205	184 aa		4.09	□□□□□ -1.75
PMS1	YNL082W	PDS5	Q04264	1277 aa		4.09	□□□□□ -1.75
PMS1	YNL082W	DAP2	P18962	818 aa		4.09	□□□□□ -1.75
PMS1	YNL082W	YPL107W	Q02873	248 aa		4.09	□□□□□ -1.75
PMS1	YNL082W	GYL1	Q04322	720 aa		4.09	□□□□□ -1.75
PMS1	YNL082W	RPN5	Q12250	445 aa	Known RBP	4.09	□□□□□ -1.75
PMS1	YNL082W	YPT1	P01123	206 aa	Known RBP	4.08	□□□□□ -1.76
PMS1	YNL082W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
PMS1	YNL082W	CNA1	P23287	553 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms