RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeast

Gene SSN8, Length 972 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSN8	YNL025C	YEL020C	P39994	560 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	LRO1	P40345	661 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	ARG2	P40360	574 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	YIL077C	P40508	320 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	HXT14	P42833	540 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	YJL107C	P42947	387 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	URB2	P47108	1174 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	YDL183C	P48569	320 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	RRP46	P53256	223 aa	Predicted RBP	3.1	□□□□□ -1.91
SSN8	YNL025C	RHO5	P53879	331 aa	Known RBP	3.1	□□□□□ -1.91
SSN8	YNL025C	PGA2	P53903	129 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	ARX1	Q03862	593 aa	Known RBP	3.1	□□□□□ -1.91
SSN8	YNL025C	BUD22	Q04347	519 aa	Known RBP	3.1	□□□□□ -1.91
SSN8	YNL025C	YLR173W	Q06247	608 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	STP4	Q07351	490 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	AIM6	Q07716	390 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	UAF30	Q08747	228 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	AFT2	Q08957	416 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	TY3A-G	Q12173	290 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	APC2	Q12440	853 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	MRPL23	Q12487	163 aa	Predicted RBP	3.1	□□□□□ -1.91
SSN8	YNL025C	TY3A-I	Q99219	290 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	YPT6	Q99260	215 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	RPL24A	P04449	155 aa	Known RBP	3.09	□□□□□ -1.91
SSN8	YNL025C	CDC37	P06101	506 aa	Known RBP	3.09	□□□□□ -1.91
SSN8	YNL025C	HIP1	P06775	603 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	UNG1	P12887	359 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	FRS1	P15624	595 aa	Known RBP	3.09	□□□□□ -1.91
SSN8	YNL025C	SRV2	P17555	526 aa	Known RBP	3.09	□□□□□ -1.91
SSN8	YNL025C	PRP2	P20095	876 aa	Predicted RBP	3.09	□□□□□ -1.91
SSN8	YNL025C	UBA1	P22515	1024 aa	Known RBP	3.09	□□□□□ -1.91
SSN8	YNL025C	SPO11	P23179	398 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	YCR016W	P25617	290 aa	Known RBP	3.09	□□□□□ -1.91
SSN8	YNL025C	YIH1	P25637	258 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	MGM101	P32787	269 aa	Known RBP	3.09	□□□□□ -1.91
SSN8	YNL025C	MSN4	P33749	630 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	SEC66	P33754	206 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	PMT1	P33775	817 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	PHO11	P35842	467 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	KDX1	P36005	433 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	STV1	P37296	890 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	PHO12	P38693	467 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	YHB1	P39676	399 aa	Known RBP	3.09	□□□□□ -1.91
SSN8	YNL025C	BDH2	P39713	417 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	JHD1	P40034	492 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	IAH1	P41734	238 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	EFM3	P47163	339 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	RPT4	P53549	437 aa	Known RBP	3.09	□□□□□ -1.91
SSN8	YNL025C	RET3	P53600	189 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	COP1	P53622	1201 aa	Known RBP	3.09	□□□□□ -1.91
SSN8	YNL025C	YNL143C	P53908	130 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	BOP3	P53958	396 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	RPA49	Q01080	415 aa	Predicted RBP	3.09	□□□□□ -1.91
SSN8	YNL025C	REC102	Q02721	264 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	MTG1	Q03151	367 aa	Predicted RBP	3.09	□□□□□ -1.91
SSN8	YNL025C	MRPS17	Q03246	237 aa	Predicted RBP	3.09	□□□□□ -1.91
SSN8	YNL025C	CTK1	Q03957	528 aa	Known RBP	3.09	□□□□□ -1.91
SSN8	YNL025C	CSI1	Q04368	295 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	GTO3	Q04806	366 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	RTN1	Q04947	295 aa	Known RBP	3.09	□□□□□ -1.91
SSN8	YNL025C	YPS7	Q06325	596 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	GGA1	Q06336	557 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	GSH2	Q08220	491 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	AIM41	Q12032	185 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	ULA1	Q12059	462 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	SUL2	Q12325	893 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	ICT1	Q12385	394 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	ISN1	Q99312	450 aa		3.09	□□□□□ -1.91
SSN8	YNL025C	JIP3	O13555	125 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	YBR085C-A	O43137	85 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	RPS9B	P05755	195 aa	Known RBP	3.08	□□□□□ -1.92
SSN8	YNL025C	CBP1	P07252	654 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	ILV2	P07342	687 aa	Known RBP	3.08	□□□□□ -1.92
SSN8	YNL025C	SSA3	P09435	649 aa	Known RBP	3.08	□□□□□ -1.92
SSN8	YNL025C	RSR1	P13856	272 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	SPO7	P18410	259 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	CDC42	P19073	191 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	OSM1	P21375	501 aa	Known RBP	3.08	□□□□□ -1.92
SSN8	YNL025C	ARG1	P22768	420 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	RPI1	P23250	407 aa	Known RBP	3.08	□□□□□ -1.92
SSN8	YNL025C	RDS1	P25611	832 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	PRP45	P28004	379 aa	Predicted RBP	3.08	□□□□□ -1.92
SSN8	YNL025C	TPO5	P36029	618 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	YKL023W	P36103	277 aa	Known RBP	3.08	□□□□□ -1.92
SSN8	YNL025C	SLM4	P38247	162 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	NUP60	P39705	539 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	MTW1	P39731	289 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	SAP1	P39955	897 aa	Known RBP	3.08	□□□□□ -1.92
SSN8	YNL025C	YIR014W	P40570	242 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	MSS2	P40990	351 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	VMA13	P41807	478 aa	Known RBP	3.08	□□□□□ -1.92
SSN8	YNL025C	IME4	P41833	600 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	LOC1	P43586	204 aa	Predicted RBP	3.08	□□□□□ -1.92
SSN8	YNL025C	YHC3	P47040	408 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	YGR149W	P48236	432 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	GTO1	P48239	356 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	CTR1	P49573	406 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	PRP31	P49704	494 aa	Predicted RBP	3.08	□□□□□ -1.92
SSN8	YNL025C	YGL138C	P53122	345 aa		3.08	□□□□□ -1.92
SSN8	YNL025C	FHN1	P53279	174 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 63.9 ms