RNA–Protein interactions for RNA: YLR139C

SLS1, Transcript of Mitochondrial membrane protein, yeast

Gene SLS1, Length 1,932 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLS1	YLR139C	CDC45	Q08032	650 aa		3.92	□□□□□ -1.78
SLS1	YLR139C	RPL15A	P05748	204 aa	Known RBP	3.91	□□□□□ -1.78
SLS1	YLR139C	PRP16	P15938	1071 aa	Predicted RBP	3.91	□□□□□ -1.78
SLS1	YLR139C	MUD2	P36084	527 aa	Known RBP	3.91	□□□□□ -1.78
SLS1	YLR139C	RPL32	P38061	130 aa	Known RBP	3.91	□□□□□ -1.78
SLS1	YLR139C	MDM31	P38880	579 aa		3.91	□□□□□ -1.78
SLS1	YLR139C	KRE9	P39005	276 aa		3.91	□□□□□ -1.78
SLS1	YLR139C	PPT2	Q12036	173 aa		3.91	□□□□□ -1.78
SLS1	YLR139C	YBR126W-A	Q8TGU7	68 aa		3.91	□□□□□ -1.78
SLS1	YLR139C	POL4	P25615	582 aa		3.91	□□□□□ -1.78
SLS1	YLR139C	SIP2	P34164	415 aa	Known RBP	3.91	□□□□□ -1.78
SLS1	YLR139C	YKL023W	P36103	277 aa	Known RBP	3.91	□□□□□ -1.78
SLS1	YLR139C	CCT6	P39079	546 aa		3.91	□□□□□ -1.78
SLS1	YLR139C	YEL068C	P39977	110 aa		3.91	□□□□□ -1.78
SLS1	YLR139C	SNG1	P46950	547 aa		3.91	□□□□□ -1.78
SLS1	YLR139C	DUO1	P53168	247 aa	Known RBP	3.91	□□□□□ -1.78
SLS1	YLR139C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.91	□□□□□ -1.78	not detected
SLS1	YLR139C	SHR3	Q02774	210 aa		3.91	□□□□□ -1.78
SLS1	YLR139C	ERP1	Q05359	219 aa	Known RBP	3.91	□□□□□ -1.78
SLS1	YLR139C	GLO2	Q05584	274 aa		3.91	□□□□□ -1.78
SLS1	YLR139C	NMD4	Q12129	218 aa		3.91	□□□□□ -1.78
SLS1	YLR139C	NOP58	Q12499	511 aa	Known RBP	3.91	□□□□□ -1.78
SLS1	YLR139C	YNK1	P36010	153 aa	Known RBP	3.9	□□□□□ -1.78
SLS1	YLR139C	RTT101	P47050	842 aa		3.9	□□□□□ -1.78
SLS1	YLR139C	ALT2	P52892	507 aa		3.9	□□□□□ -1.78
SLS1	YLR139C	DRN1	P53255	507 aa	Known RBP	3.9	□□□□□ -1.78
SLS1	YLR139C	DUG3	P53871	357 aa		3.9	□□□□□ -1.78
SLS1	YLR139C	YOR365C	Q08844	703 aa		3.9	□□□□□ -1.78
SLS1	YLR139C	FMP40	Q08968	688 aa	Predicted RBP	3.9	□□□□□ -1.78
SLS1	YLR139C	AMD1	P15274	810 aa	Known RBP	3.89	□□□□□ -1.79
SLS1	YLR139C	YHR210C	P38893	341 aa		3.89	□□□□□ -1.79
SLS1	YLR139C	CIN4	P39110	191 aa		3.89	□□□□□ -1.79
SLS1	YLR139C	YJR154W	P47181	346 aa		3.89	□□□□□ -1.79
SLS1	YLR139C	YDL186W	P48568	277 aa		3.89	□□□□□ -1.79
SLS1	YLR139C	COS10	P52924	374 aa		3.89	□□□□□ -1.79
SLS1	YLR139C	DSD1	P53095	428 aa		3.89	□□□□□ -1.79
SLS1	YLR139C	BUD32	P53323	261 aa		3.89	□□□□□ -1.79
SLS1	YLR139C	NGL3	Q03210	505 aa		3.89	□□□□□ -1.79
SLS1	YLR139C	BNA5	Q05979	453 aa		3.89	□□□□□ -1.79
SLS1	YLR139C	APE1	P14904	514 aa		3.89	□□□□□ -1.79
SLS1	YLR139C	SGF29	P25554	259 aa		3.89	□□□□□ -1.79
SLS1	YLR139C	ATS1	P31386	333 aa		3.89	□□□□□ -1.79
SLS1	YLR139C	SAC6	P32599	642 aa	Known RBP	3.89	□□□□□ -1.79
SLS1	YLR139C	TIF3	P34167	436 aa	Known RBP	3.89	□□□□□ -1.79
SLS1	YLR139C	OSH3	P38713	996 aa	Known RBP	3.89	□□□□□ -1.79
SLS1	YLR139C	FLC2	P39719	783 aa		3.89	□□□□□ -1.79
SLS1	YLR139C	YGR126W	P53274	230 aa		3.89	□□□□□ -1.79
SLS1	YLR139C	HUA2	Q12134	243 aa		3.89	□□□□□ -1.79
SLS1	YLR139C	SEM1	O94742	89 aa		3.88	□□□□□ -1.79
SLS1	YLR139C	BUD14	P27637	709 aa		3.88	□□□□□ -1.79
SLS1	YLR139C	NDC1	P32500	655 aa		3.88	□□□□□ -1.79
SLS1	YLR139C	NOP16	P40007	231 aa	Known RBP	3.88	□□□□□ -1.79
SLS1	YLR139C	VID27	P40157	782 aa		3.88	□□□□□ -1.79
SLS1	YLR139C	RPR2	P40571	144 aa		3.88	□□□□□ -1.79
SLS1	YLR139C	LCL3	P53153	274 aa		3.88	□□□□□ -1.79
SLS1	YLR139C	SYO1	Q07395	620 aa		3.88	□□□□□ -1.79
SLS1	YLR139C	YEH1	Q07804	573 aa		3.88	□□□□□ -1.79
SLS1	YLR139C	MTF1	P14908	341 aa	Known RBP	3.87	□□□□□ -1.79
SLS1	YLR139C	SPC110	P32380	944 aa		3.87	□□□□□ -1.79
SLS1	YLR139C	PAH1	P32567	862 aa		3.87	□□□□□ -1.79
SLS1	YLR139C	VPS52	P39904	641 aa		3.87	□□□□□ -1.79
SLS1	YLR139C	RPH1	P39956	796 aa		3.87	□□□□□ -1.79
SLS1	YLR139C	ROK1	P45818	564 aa	Predicted RBP	3.87	□□□□□ -1.79
SLS1	YLR139C	SUC2	P00724	532 aa		3.87	□□□□□ -1.79
SLS1	YLR139C	PEP4	P07267	405 aa	Known RBP	3.87	□□□□□ -1.79
SLS1	YLR139C	MRP13	P12686	339 aa		3.87	□□□□□ -1.79
SLS1	YLR139C	ART10	P18634	518 aa	Known RBP	3.87	□□□□□ -1.79
SLS1	YLR139C	SUI2	P20459	304 aa	Known RBP	3.87	□□□□□ -1.79
SLS1	YLR139C	CPR3	P25719	182 aa		3.87	□□□□□ -1.79
SLS1	YLR139C	UBP11	P36026	717 aa		3.87	□□□□□ -1.79
SLS1	YLR139C	YHR218W	P38899	603 aa		3.87	□□□□□ -1.79
SLS1	YLR139C	YFR016C	P43597	1233 aa	Known RBP	3.87	□□□□□ -1.79
SLS1	YLR139C	SVL3	Q03088	825 aa	Known RBP	3.87	□□□□□ -1.79
SLS1	YLR139C	YDR056C	Q12025	205 aa		3.87	□□□□□ -1.79
SLS1	YLR139C	SET6	Q12529	373 aa		3.87	□□□□□ -1.79
SLS1	YLR139C	YPT6	Q99260	215 aa		3.87	□□□□□ -1.79
SLS1	YLR139C	GDH1	P07262	454 aa	Known RBP	3.86	□□□□□ -1.79
SLS1	YLR139C	PTR2	P32901	601 aa		3.86	□□□□□ -1.79
SLS1	YLR139C	YJL213W	P40896	331 aa		3.86	□□□□□ -1.79
SLS1	YLR139C	YDL057W	Q07379	328 aa		3.86	□□□□□ -1.79
SLS1	YLR139C	YDL009C	Q12210	107 aa		3.86	□□□□□ -1.79
SLS1	YLR139C	CYB2	P00175	591 aa		3.85	□□□□□ -1.79
SLS1	YLR139C	RAD52	P06778	471 aa	Known RBP	3.85	□□□□□ -1.79
SLS1	YLR139C	MCK1	P21965	375 aa	Known RBP	3.85	□□□□□ -1.79
SLS1	YLR139C	UPF3	P48412	387 aa	Known RBP	3.85	□□□□□ -1.79
SLS1	YLR139C	SLD5	Q03406	294 aa		3.85	□□□□□ -1.79
SLS1	YLR139C	TLG2	Q08144	397 aa		3.85	□□□□□ -1.79
SLS1	YLR139C	AYT1	Q12226	474 aa		3.85	□□□□□ -1.79
SLS1	YLR139C	YCR007C	P25354	239 aa		3.85	□□□□□ -1.79
SLS1	YLR139C	NOP4	P37838	685 aa	Known RBP	3.85	□□□□□ -1.79
SLS1	YLR139C	MTC4	P38335	694 aa	Known RBP	3.85	□□□□□ -1.79
SLS1	YLR139C	AFG3	P39925	761 aa		3.85	□□□□□ -1.79
SLS1	YLR139C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.85	□□□□□ -1.79	not detected
SLS1	YLR139C	RLI1	Q03195	608 aa	Known RBP	3.85	□□□□□ -1.79
SLS1	YLR139C	SGS1	P35187	1447 aa		3.85	□□□□□ -1.79
SLS1	YLR139C	SEC53	P07283	254 aa	Known RBP	3.84	□□□□□ -1.79
SLS1	YLR139C	ELO2	P25358	347 aa		3.84	□□□□□ -1.79
SLS1	YLR139C	RPC11	Q04307	110 aa	Predicted RBP	3.84	□□□□□ -1.79
SLS1	YLR139C	COQ9	Q05779	260 aa		3.84	□□□□□ -1.79
SLS1	YLR139C	HSH49	Q99181	213 aa	Predicted RBP	3.84	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 78.4 ms