RNA–Protein interactions for RNA: YLL046C

RNP1, Transcript of Ribonucleoprotein that contains two RNA recognition motifs (RRM), yeast

Gene RNP1, Length 750 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RNP1	YLL046C	RGI2	P40188	164 aa		2.59	□□□□□ -1.99
RNP1	YLL046C	MET18	P40469	1032 aa		2.59	□□□□□ -1.99
RNP1	YLL046C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
RNP1	YLL046C	DJP1	P40564	432 aa		2.59	□□□□□ -1.99
RNP1	YLL046C	IME4	P41833	600 aa		2.59	□□□□□ -1.99
RNP1	YLL046C	YJL055W	P47044	245 aa		2.59	□□□□□ -1.99
RNP1	YLL046C	AAD10	P47182	288 aa		2.59	□□□□□ -1.99
RNP1	YLL046C	PIL1	P53252	339 aa	Known RBP	2.59	□□□□□ -1.99
RNP1	YLL046C	BNI5	P53890	448 aa	Known RBP	2.59	□□□□□ -1.99
RNP1	YLL046C	MTG1	Q03151	367 aa	Predicted RBP	2.59	□□□□□ -1.99
RNP1	YLL046C	YML037C	Q03703	340 aa		2.59	□□□□□ -1.99
RNP1	YLL046C	PRP42	Q03776	544 aa	Known RBP	2.59	□□□□□ -1.99
RNP1	YLL046C	VTI1	Q04338	217 aa		2.59	□□□□□ -1.99
RNP1	YLL046C	SWF1	Q04629	336 aa		2.59	□□□□□ -1.99
RNP1	YLL046C	YDR341C	Q05506	607 aa	Known RBP	2.59	□□□□□ -1.99
RNP1	YLL046C	CUE5	Q08412	411 aa	Known RBP	2.59	□□□□□ -1.99
RNP1	YLL046C	FRE6	Q12473	712 aa		2.59	□□□□□ -1.99
RNP1	YLL046C	CBS2	P14905	389 aa		2.58	□□□□□ -2
RNP1	YLL046C	PWP1	P21304	576 aa	Known RBP	2.58	□□□□□ -2
RNP1	YLL046C	CLB1	P24868	471 aa		2.58	□□□□□ -2
RNP1	YLL046C	MKT1	P40850	830 aa	Known RBP	2.58	□□□□□ -2
RNP1	YLL046C	NPA3	P47122	385 aa		2.58	□□□□□ -2
RNP1	YLL046C	LYS4	P49367	693 aa	Predicted RBP	2.58	□□□□□ -2
RNP1	YLL046C	VPS9	P54787	451 aa		2.58	□□□□□ -2
RNP1	YLL046C	MUB1	Q03162	620 aa		2.58	□□□□□ -2
RNP1	YLL046C	YDR239C	Q03780	787 aa		2.58	□□□□□ -2
RNP1	YLL046C	FMP45	Q07651	309 aa		2.58	□□□□□ -2
RNP1	YLL046C	SWT1	Q12104	458 aa		2.58	□□□□□ -2
RNP1	YLL046C	SPE4	Q12455	300 aa		2.58	□□□□□ -2
RNP1	YLL046C	TY1B-A	O13527	1196 aa	Known RBP	2.57	□□□□□ -2
RNP1	YLL046C	YBR085C-A	O43137	85 aa		2.57	□□□□□ -2
RNP1	YLL046C	EST1	P17214	699 aa	Predicted RBP	2.57	□□□□□ -2
RNP1	YLL046C	GLK1	P17709	500 aa	Known RBP	2.57	□□□□□ -2
RNP1	YLL046C	LDB16	P25587	256 aa		2.57	□□□□□ -2
RNP1	YLL046C	YCR051W	P25631	222 aa		2.57	□□□□□ -2
RNP1	YLL046C	ERV1	P27882	189 aa		2.57	□□□□□ -2
RNP1	YLL046C	PAP1	P29468	568 aa	Known RBP	2.57	□□□□□ -2
RNP1	YLL046C	RPN2	P32565	945 aa	Known RBP	2.57	□□□□□ -2
RNP1	YLL046C	SWH1	P35845	1188 aa		2.57	□□□□□ -2
RNP1	YLL046C	RRT2	P38332	387 aa		2.57	□□□□□ -2
RNP1	YLL046C	SEC24	P40482	926 aa	Known RBP	2.57	□□□□□ -2
RNP1	YLL046C	EFM4	P40516	257 aa		2.57	□□□□□ -2
RNP1	YLL046C	RPS0B	P46654	252 aa	Known RBP	2.57	□□□□□ -2
RNP1	YLL046C	MDE1	P47095	244 aa		2.57	□□□□□ -2
RNP1	YLL046C	JJJ1	P53863	590 aa		2.57	□□□□□ -2
RNP1	YLL046C	YEH1	Q07804	573 aa		2.57	□□□□□ -2
RNP1	YLL046C	GPM3	Q12326	303 aa		2.57	□□□□□ -2
RNP1	YLL046C	HSP42	Q12329	375 aa		2.57	□□□□□ -2
RNP1	YLL046C	YJR112W-A	Q3E743	109 aa		2.57	□□□□□ -2
RNP1	YLL046C	AFI1	Q99222	893 aa		2.57	□□□□□ -2
RNP1	YLL046C	GAL80	P04387	435 aa		2.56	□□□□□ -2
RNP1	YLL046C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	2.56	□□□□□ -2	not detected
RNP1	YLL046C	REC107	P21651	314 aa		2.56	□□□□□ -2
RNP1	YLL046C	RFA2	P26754	273 aa	Known RBP	2.56	□□□□□ -2
RNP1	YLL046C	URA7	P28274	579 aa	Known RBP	2.56	□□□□□ -2
RNP1	YLL046C	SMI1	P32566	505 aa		2.56	□□□□□ -2
RNP1	YLL046C	TFB1	P32776	642 aa		2.56	□□□□□ -2
RNP1	YLL046C	TRS65	P32893	560 aa		2.56	□□□□□ -2
RNP1	YLL046C	LAS1	P36146	502 aa	Predicted RBP	2.56	□□□□□ -2
RNP1	YLL046C	RIM2	P38127	377 aa		2.56	□□□□□ -2
RNP1	YLL046C	CST26	P38226	397 aa		2.56	□□□□□ -2
RNP1	YLL046C	VID24	P38263	362 aa		2.56	□□□□□ -2
RNP1	YLL046C	TIF4631	P39935	952 aa	Known RBP	2.56	□□□□□ -2
RNP1	YLL046C	MET28	P40573	187 aa		2.56	□□□□□ -2
RNP1	YLL046C	YGR066C	P53242	292 aa		2.56	□□□□□ -2
RNP1	YLL046C	YGR079W	P53249	370 aa		2.56	□□□□□ -2
RNP1	YLL046C	NNF2	P53253	936 aa		2.56	□□□□□ -2
RNP1	YLL046C	YPL107W	Q02873	248 aa		2.56	□□□□□ -2
RNP1	YLL046C	PRP3	Q03338	469 aa	Predicted RBP	2.56	□□□□□ -2
RNP1	YLL046C	ARX1	Q03862	593 aa	Known RBP	2.56	□□□□□ -2
RNP1	YLL046C	BUD22	Q04347	519 aa	Known RBP	2.56	□□□□□ -2
RNP1	YLL046C	ROY1	Q04847	553 aa		2.56	□□□□□ -2
RNP1	YLL046C	RSF1	Q05043	376 aa		2.56	□□□□□ -2
RNP1	YLL046C	VPS38	Q05919	439 aa		2.56	□□□□□ -2
RNP1	YLL046C	KEL3	Q08979	651 aa	Predicted RBP	2.56	□□□□□ -2
RNP1	YLL046C	YPT6	Q99260	215 aa		2.56	□□□□□ -2
RNP1	YLL046C	ARD1	P07347	238 aa	Predicted RBP	2.55	□□□□□ -2
RNP1	YLL046C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	2.55	□□□□□ -2	not detected
RNP1	YLL046C	YML003W	P0CF16	290 aa		2.55	□□□□□ -2
RNP1	YLL046C	RPL3	P14126	387 aa	Known RBP	2.55	□□□□□ -2
RNP1	YLL046C	VMA2	P16140	517 aa	Known RBP	2.55	□□□□□ -2
RNP1	YLL046C	BUD14	P27637	709 aa		2.55	□□□□□ -2
RNP1	YLL046C	SRB5	P32585	307 aa		2.55	□□□□□ -2
RNP1	YLL046C	PMT1	P33775	817 aa		2.55	□□□□□ -2
RNP1	YLL046C	GEX2	P36173	615 aa		2.55	□□□□□ -2
RNP1	YLL046C	LEU5	P38702	357 aa		2.55	□□□□□ -2
RNP1	YLL046C	BUD16	P39988	312 aa		2.55	□□□□□ -2
RNP1	YLL046C	FYV8	P46949	817 aa	Known RBP	2.55	□□□□□ -2
RNP1	YLL046C	TCB2	P48231	1178 aa		2.55	□□□□□ -2
RNP1	YLL046C	YNL181W	P53878	407 aa		2.55	□□□□□ -2
RNP1	YLL046C	NCS2	P53923	493 aa	Predicted RBP	2.55	□□□□□ -2
RNP1	YLL046C	YML133C	Q03099	1374 aa		2.55	□□□□□ -2
RNP1	YLL046C	RPC11	Q04307	110 aa	Predicted RBP	2.55	□□□□□ -2
RNP1	YLL046C	YLR456W	Q06199	204 aa		2.55	□□□□□ -2
RNP1	YLL046C	YLL067C	Q07888	1374 aa		2.55	□□□□□ -2
RNP1	YLL046C	SPE3	Q12074	293 aa	Known RBP	2.55	□□□□□ -2
RNP1	YLL046C	REX3	Q12090	404 aa		2.55	□□□□□ -2
RNP1	YLL046C	ATG29	Q12092	213 aa		2.55	□□□□□ -2
RNP1	YLL046C	CTF3	Q12748	733 aa		2.55	□□□□□ -2
RNP1	YLL046C	YLL066C	Q99208	1374 aa		2.55	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 53.1 ms