RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W YNK1P36010 153 aaKnown RBP2.54□□□□□ -2
PEP8YJL053W UBP11P36026 717 aa2.54□□□□□ -2
PEP8YJL053W YKL023WP36103 277 aaKnown RBP2.54□□□□□ -2
PEP8YJL053W NUP133P36161 1157 aa2.54□□□□□ -2
PEP8YJL053W RPL32P38061 130 aaKnown RBP2.54□□□□□ -2
PEP8YJL053W ERG7P38604 731 aa2.54□□□□□ -2
PEP8YJL053W LEU5P38702 357 aa2.54□□□□□ -2
PEP8YJL053W LAG1P38703 411 aa2.54□□□□□ -2
PEP8YJL053W UBA4P38820 440 aa2.54□□□□□ -2
PEP8YJL053W CIN4P39110 191 aa2.54□□□□□ -2
PEP8YJL053W ALG5P40350 334 aa2.54□□□□□ -2
PEP8YJL053W HXT9P40885 567 aa2.54□□□□□ -2
PEP8YJL053W APT1P49435 187 aaKnown RBP2.54□□□□□ -2
PEP8YJL053W LCL3P53153 274 aa2.54□□□□□ -2
PEP8YJL053W YGR126WP53274 230 aa2.54□□□□□ -2
PEP8YJL053W DUG3P53871 357 aa2.54□□□□□ -2
PEP8YJL053W RSM23Q01163 450 aa2.54□□□□□ -2
PEP8YJL053W RPT6Q01939 405 aaKnown RBP2.54□□□□□ -2
PEP8YJL053W ADE13Q05911 482 aaKnown RBP2.54□□□□□ -2
PEP8YJL053W YEH1Q07804 573 aa2.54□□□□□ -2
PEP8YJL053W MED1Q12321 566 aa2.54□□□□□ -2
PEP8YJL053W SPE4Q12455 300 aa2.54□□□□□ -2
PEP8YJL053W ARP6Q12509 438 aa2.54□□□□□ -2
PEP8YJL053W SGS1P35187 1447 aa2.53□□□□□ -2
PEP8YJL053W DFR1P07807 211 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
PEP8YJL053W EST1P17214 699 aaPredicted RBP2.53□□□□□ -2
PEP8YJL053W RPN2P32565 945 aaKnown RBP2.53□□□□□ -2
PEP8YJL053W TRS65P32893 560 aa2.53□□□□□ -2
PEP8YJL053W PHD1P36093 366 aa2.53□□□□□ -2
PEP8YJL053W UTP9P38882 575 aaKnown RBP2.53□□□□□ -2
PEP8YJL053W ARF3P40994 183 aaRIP-Chip data2.53□□□□□ -2 RIP-Chip
PEP8YJL053W MRX6P48564 524 aa2.53□□□□□ -2
PEP8YJL053W RBG2P53295 368 aaKnown RBP2.53□□□□□ -2
PEP8YJL053W SMM1P53720 384 aaKnown RBP2.53□□□□□ -2
PEP8YJL053W VPS75P53853 264 aa2.53□□□□□ -2
PEP8YJL053W FIN1Q03898 291 aa2.53□□□□□ -2
PEP8YJL053W COG4Q06096 861 aa2.53□□□□□ -2
PEP8YJL053W IMH1Q06704 911 aaKnown RBP2.53□□□□□ -2
PEP8YJL053W YPL272CQ08984 517 aa2.53□□□□□ -2
PEP8YJL053W AVL9Q12500 764 aa2.53□□□□□ -2
PEP8YJL053W YPT6Q99260 215 aa2.53□□□□□ -2
PEP8YJL053W PMS1P14242 873 aa2.52□□□□□ -2.01
PEP8YJL053W ART10P18634 518 aaKnown RBP2.52□□□□□ -2.01
PEP8YJL053W TYR1P20049 452 aa2.52□□□□□ -2.01
PEP8YJL053W PAP1P29468 568 aaKnown RBP2.52□□□□□ -2.01
PEP8YJL053W YBR225WP38321 900 aa2.52□□□□□ -2.01
PEP8YJL053W RRT2P38332 387 aa2.52□□□□□ -2.01
PEP8YJL053W EFM2P38347 419 aa2.52□□□□□ -2.01
PEP8YJL053W CCT6P39079 546 aa2.52□□□□□ -2.01
PEP8YJL053W ERP2P39704 215 aa2.52□□□□□ -2.01
PEP8YJL053W ALK1P43633 760 aaKnown RBP2.52□□□□□ -2.01
PEP8YJL053W RPS10BP46784 105 aaKnown RBP2.52□□□□□ -2.01
PEP8YJL053W SNG1P46950 547 aa2.52□□□□□ -2.01
PEP8YJL053W PYK2P52489 506 aaKnown RBP2.52□□□□□ -2.01
PEP8YJL053W PKP2P53170 491 aa2.52□□□□□ -2.01
PEP8YJL053W IPI3P53877 555 aa2.52□□□□□ -2.01
PEP8YJL053W YVH1Q02256 364 aaKnown RBP2.52□□□□□ -2.01
PEP8YJL053W NUP100Q02629 959 aa2.52□□□□□ -2.01
PEP8YJL053W MSS11Q03825 758 aa2.52□□□□□ -2.01
PEP8YJL053W VPS38Q05919 439 aa2.52□□□□□ -2.01
PEP8YJL053W RTT109Q07794 436 aa2.52□□□□□ -2.01
PEP8YJL053W RPS10AQ08745 105 aaPredicted RBP2.52□□□□□ -2.01
PEP8YJL053W APL5Q08951 932 aaKnown RBP2.52□□□□□ -2.01
PEP8YJL053W RTP1Q12751 981 aa2.52□□□□□ -2.01
PEP8YJL053W INH1P01097 85 aa2.51□□□□□ -2.01
PEP8YJL053W MET8P15807 274 aa2.51□□□□□ -2.01
PEP8YJL053W PDA1P16387 420 aaKnown RBP2.51□□□□□ -2.01
PEP8YJL053W HNM1P19807 563 aa2.51□□□□□ -2.01
PEP8YJL053W KGD1P20967 1014 aaKnown RBP2.51□□□□□ -2.01
PEP8YJL053W SEC1P30619 724 aaKnown RBP2.51□□□□□ -2.01
PEP8YJL053W SYN8P31377 255 aa2.51□□□□□ -2.01
PEP8YJL053W YME1P32795 747 aa2.51□□□□□ -2.01
PEP8YJL053W MTR2P34232 184 aaKnown RBP2.51□□□□□ -2.01
PEP8YJL053W JNM1P36224 373 aa2.51□□□□□ -2.01
PEP8YJL053W ARP1P38696 384 aa2.51□□□□□ -2.01
PEP8YJL053W KRE9P39005 276 aa2.51□□□□□ -2.01
PEP8YJL053W YTA12P40341 825 aa2.51□□□□□ -2.01
PEP8YJL053W YIR014WP40570 242 aa2.51□□□□□ -2.01
PEP8YJL053W AXL1P40851 1208 aa2.51□□□□□ -2.01
PEP8YJL053W FET5P43561 622 aa2.51□□□□□ -2.01
PEP8YJL053W ATG27P46989 271 aa2.51□□□□□ -2.01
PEP8YJL053W SHR3Q02774 210 aa2.51□□□□□ -2.01
PEP8YJL053W MFB1Q04922 465 aa2.51□□□□□ -2.01
PEP8YJL053W FOB1O13329 566 aa2.5□□□□□ -2.01
PEP8YJL053W PEP5P12868 1029 aa2.5□□□□□ -2.01
PEP8YJL053W ERG1P32476 496 aaKnown RBP2.5□□□□□ -2.01
PEP8YJL053W VPS17P32913 551 aa2.5□□□□□ -2.01
PEP8YJL053W TCD2P36101 447 aaKnown RBP2.5□□□□□ -2.01
PEP8YJL053W SRO77P38163 1010 aa2.5□□□□□ -2.01
PEP8YJL053W NDE1P40215 560 aa2.5□□□□□ -2.01
PEP8YJL053W IMD4P50094 524 aaKnown RBP2.5□□□□□ -2.01
PEP8YJL053W ALT2P52892 507 aa2.5□□□□□ -2.01
PEP8YJL053W TDA7P53882 636 aaPredicted RBP2.5□□□□□ -2.01
PEP8YJL053W TIM10P87108 93 aa2.5□□□□□ -2.01
PEP8YJL053W RHO4Q00246 291 aa2.5□□□□□ -2.01
PEP8YJL053W YPL014WQ02606 381 aa2.5□□□□□ -2.01
PEP8YJL053W GLO2Q05584 274 aa2.5□□□□□ -2.01
PEP8YJL053W YDL057WQ07379 328 aa2.5□□□□□ -2.01
PEP8YJL053W YEH2Q07950 538 aa2.5□□□□□ -2.01
PEP8YJL053W BSC1Q12140 328 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms