RNA–Protein interactions for RNA: YGL056C

SDS23, Transcript of Protein involved in cell separation during budding, yeastyeast

Gene SDS23, Length 1,584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS23YGL056C RPL3P14126 387 aaKnown RBP3.83□□□□□ -1.8
SDS23YGL056C CPR2P23285 205 aa3.83□□□□□ -1.8
SDS23YGL056C HXT3P32466 567 aaKnown RBP3.83□□□□□ -1.8
SDS23YGL056C GSH1P32477 678 aa3.83□□□□□ -1.8
SDS23YGL056C TRM2P33753 639 aa3.83□□□□□ -1.8
SDS23YGL056C THI2P38141 450 aa3.83□□□□□ -1.8
SDS23YGL056C ELO1P39540 310 aa3.83□□□□□ -1.8
SDS23YGL056C PES4P39684 611 aa3.83□□□□□ -1.8
SDS23YGL056C ASG1P40467 964 aa3.83□□□□□ -1.8
SDS23YGL056C EFM4P40516 257 aa3.83□□□□□ -1.8
SDS23YGL056C TDA10P42938 290 aa3.83□□□□□ -1.8
SDS23YGL056C ASN1P49089 572 aaKnown RBP3.83□□□□□ -1.8
SDS23YGL056C RAD34Q06665 692 aa3.83□□□□□ -1.8
SDS23YGL056C CUE5Q08412 411 aaKnown RBP3.83□□□□□ -1.8
SDS23YGL056C LEA1Q08963 238 aaPredicted RBP3.83□□□□□ -1.8
SDS23YGL056C SEC39Q12745 709 aa3.83□□□□□ -1.8
SDS23YGL056C CYB2P00175 591 aa3.82□□□□□ -1.8
SDS23YGL056C RPL7AP05737 244 aaKnown RBP3.82□□□□□ -1.8
SDS23YGL056C ILV2P07342 687 aaKnown RBP3.82□□□□□ -1.8
SDS23YGL056C APN1P22936 367 aa3.82□□□□□ -1.8
SDS23YGL056C IMG1P25626 169 aa3.82□□□□□ -1.8
SDS23YGL056C PTC6P25646 442 aa3.82□□□□□ -1.8
SDS23YGL056C MGM1P32266 881 aa3.82□□□□□ -1.8
SDS23YGL056C UGP1P32861 499 aaKnown RBP3.82□□□□□ -1.8
SDS23YGL056C FAR3P46671 204 aa3.82□□□□□ -1.8
SDS23YGL056C YPR003CP53394 754 aa3.82□□□□□ -1.8
SDS23YGL056C AAT1Q01802 451 aa3.82□□□□□ -1.8
SDS23YGL056C CYK3Q07533 885 aa3.82□□□□□ -1.8
SDS23YGL056C SPE3Q12074 293 aaKnown RBP3.82□□□□□ -1.8
SDS23YGL056C RPL7BQ12213 244 aaKnown RBP3.82□□□□□ -1.8
SDS23YGL056C NFI1Q12216 726 aa3.82□□□□□ -1.8
SDS23YGL056C YML133CQ03099 1374 aa3.82□□□□□ -1.8
SDS23YGL056C YLL067CQ07888 1374 aa3.82□□□□□ -1.8
SDS23YGL056C YLL066CQ99208 1374 aa3.82□□□□□ -1.8
SDS23YGL056C KRS1P15180 591 aaKnown RBP3.81□□□□□ -1.8
SDS23YGL056C ART10P18634 518 aaKnown RBP3.81□□□□□ -1.8
SDS23YGL056C PMA2P19657 947 aa3.81□□□□□ -1.8
SDS23YGL056C ELO2P25358 347 aa3.81□□□□□ -1.8
SDS23YGL056C AAD3P25612 363 aa3.81□□□□□ -1.8
SDS23YGL056C TFB1P32776 642 aa3.81□□□□□ -1.8
SDS23YGL056C NUP133P36161 1157 aa3.81□□□□□ -1.8
SDS23YGL056C CAK1P43568 368 aaPredicted RBP3.81□□□□□ -1.8
SDS23YGL056C KAP120Q02932 1032 aa3.81□□□□□ -1.8
SDS23YGL056C PRP42Q03776 544 aaKnown RBP3.81□□□□□ -1.8
SDS23YGL056C RSF1Q05043 376 aa3.81□□□□□ -1.8
SDS23YGL056C VTA1Q06263 330 aa3.81□□□□□ -1.8
SDS23YGL056C LEU9Q12166 604 aaKnown RBP3.81□□□□□ -1.8
SDS23YGL056C FRE6Q12473 712 aa3.81□□□□□ -1.8
SDS23YGL056C NUP192P47054 1683 aa3.81□□□□□ -1.8
SDS23YGL056C CHO1P08456 276 aa3.8□□□□□ -1.8
SDS23YGL056C RML2P32611 393 aa3.8□□□□□ -1.8
SDS23YGL056C YBL055CP34220 418 aaPredicted RBP3.8□□□□□ -1.8
SDS23YGL056C RRT2P38332 387 aa3.8□□□□□ -1.8
SDS23YGL056C STB2P46679 850 aa3.8□□□□□ -1.8
SDS23YGL056C CUL3P53202 744 aa3.8□□□□□ -1.8
SDS23YGL056C YPL107WQ02873 248 aa3.8□□□□□ -1.8
SDS23YGL056C MSC1Q03104 513 aa3.8□□□□□ -1.8
SDS23YGL056C PDS5Q04264 1277 aa3.8□□□□□ -1.8
SDS23YGL056C MMR1Q06324 491 aa3.8□□□□□ -1.8
SDS23YGL056C ARO10Q06408 635 aa3.8□□□□□ -1.8
SDS23YGL056C TEN1Q07921 160 aa3.8□□□□□ -1.8
SDS23YGL056C YDL007C-AQ2V2Q0 85 aa3.8□□□□□ -1.8
SDS23YGL056C HEL1P36113 551 aa3.8□□□□□ -1.8
SDS23YGL056C TSC10P38342 320 aa3.8□□□□□ -1.8
SDS23YGL056C OPT1P40897 799 aa3.8□□□□□ -1.8
SDS23YGL056C MNP1P53163 194 aaPredicted RBP3.8□□□□□ -1.8
SDS23YGL056C YGR127WP53275 312 aa3.8□□□□□ -1.8
SDS23YGL056C TAP42Q04372 366 aa3.8□□□□□ -1.8
SDS23YGL056C COQ9Q05779 260 aa3.8□□□□□ -1.8
SDS23YGL056C KEL3Q08979 651 aaPredicted RBP3.8□□□□□ -1.8
SDS23YGL056C RPN5Q12250 445 aaKnown RBP3.8□□□□□ -1.8
SDS23YGL056C YLR419WQ06698 1435 aaKnown RBP3.8□□□□□ -1.8
SDS23YGL056C BNI1P41832 1953 aa3.79□□□□□ -1.8
SDS23YGL056C CLC1P17891 233 aa3.79□□□□□ -1.8
SDS23YGL056C PPH22P23595 377 aa3.79□□□□□ -1.8
SDS23YGL056C POT1P27796 417 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
SDS23YGL056C IDH2P28241 369 aaKnown RBP3.79□□□□□ -1.8
SDS23YGL056C YME1P32795 747 aa3.79□□□□□ -1.8
SDS23YGL056C YME2P32843 850 aa3.79□□□□□ -1.8
SDS23YGL056C TUL1P36096 758 aa3.79□□□□□ -1.8
SDS23YGL056C MSR1P38714 643 aa3.79□□□□□ -1.8
SDS23YGL056C MUP3P38734 546 aa3.79□□□□□ -1.8
SDS23YGL056C POP2P39008 433 aa3.79□□□□□ -1.8
SDS23YGL056C EXO1P39875 702 aa3.79□□□□□ -1.8
SDS23YGL056C CDC1P40986 491 aa3.79□□□□□ -1.8
SDS23YGL056C SUN4P53616 420 aa3.79□□□□□ -1.8
SDS23YGL056C HBT1Q07653 1046 aaKnown RBP3.79□□□□□ -1.8
SDS23YGL056C RPS10AQ08745 105 aaPredicted RBP3.79□□□□□ -1.8
SDS23YGL056C ACF2Q12168 779 aa3.79□□□□□ -1.8
SDS23YGL056C CTF3Q12748 733 aa3.79□□□□□ -1.8
SDS23YGL056C BOS1P25385 244 aa3.78□□□□□ -1.8
SDS23YGL056C RPN2P32565 945 aaKnown RBP3.78□□□□□ -1.8
SDS23YGL056C HCS1P34243 683 aa3.78□□□□□ -1.8
SDS23YGL056C SLM4P38247 162 aa3.78□□□□□ -1.8
SDS23YGL056C ICS2P38284 255 aa3.78□□□□□ -1.8
SDS23YGL056C YHR054CP38780 354 aa3.78□□□□□ -1.8
SDS23YGL056C ERV46P39727 415 aa3.78□□□□□ -1.8
SDS23YGL056C SDS3P40505 327 aa3.78□□□□□ -1.8
SDS23YGL056C PTR3P43606 678 aa3.78□□□□□ -1.8
SDS23YGL056C STU2P46675 888 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms