RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	XYL2	Q07993	356 aa		3.98	□□□□□ -1.77
SPI1	YER150W	SMC5	Q08204	1093 aa		3.98	□□□□□ -1.77
SPI1	YER150W	BUD7	Q08754	746 aa		3.98	□□□□□ -1.77
SPI1	YER150W	SPE4	Q12455	300 aa		3.98	□□□□□ -1.77
SPI1	YER150W	SKI3	P17883	1432 aa	Known RBP	3.97	□□□□□ -1.77
SPI1	YER150W	RAD7	P06779	565 aa		3.97	□□□□□ -1.77
SPI1	YER150W	PET122	P10355	254 aa		3.97	□□□□□ -1.77
SPI1	YER150W	RPL3	P14126	387 aa	Known RBP	3.97	□□□□□ -1.77
SPI1	YER150W	APA2	P22108	325 aa		3.97	□□□□□ -1.77
SPI1	YER150W	CMK2	P22517	447 aa		3.97	□□□□□ -1.77
SPI1	YER150W	SIP1	P32578	815 aa		3.97	□□□□□ -1.77
SPI1	YER150W	RML2	P32611	393 aa		3.97	□□□□□ -1.77
SPI1	YER150W	SEC66	P33754	206 aa		3.97	□□□□□ -1.77
SPI1	YER150W	TIF3	P34167	436 aa	Known RBP	3.97	□□□□□ -1.77
SPI1	YER150W	YKL071W	P36086	256 aa		3.97	□□□□□ -1.77
SPI1	YER150W	POA1	P38218	177 aa		3.97	□□□□□ -1.77
SPI1	YER150W	AKR1	P39010	764 aa		3.97	□□□□□ -1.77
SPI1	YER150W	SSN3	P39073	555 aa		3.97	□□□□□ -1.77
SPI1	YER150W	NUP60	P39705	539 aa		3.97	□□□□□ -1.77
SPI1	YER150W	PZF1	P39933	429 aa		3.97	□□□□□ -1.77
SPI1	YER150W	AGE2	P40529	298 aa		3.97	□□□□□ -1.77
SPI1	YER150W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
SPI1	YER150W	CEP3	P40969	608 aa		3.97	□□□□□ -1.77
SPI1	YER150W	YJL132W	P47014	750 aa		3.97	□□□□□ -1.77
SPI1	YER150W	ZAP1	P47043	880 aa		3.97	□□□□□ -1.77
SPI1	YER150W	PET130	P47065	347 aa		3.97	□□□□□ -1.77
SPI1	YER150W	TMA22	P47089	198 aa	Predicted RBP	3.97	□□□□□ -1.77
SPI1	YER150W	BIO3	P50277	480 aa		3.97	□□□□□ -1.77
SPI1	YER150W	INP52	P50942	1183 aa		3.97	□□□□□ -1.77
SPI1	YER150W	EXG2	P52911	562 aa		3.97	□□□□□ -1.77
SPI1	YER150W	KAP114	P53067	1004 aa		3.97	□□□□□ -1.77
SPI1	YER150W	ZPR1	P53303	486 aa	Known RBP	3.97	□□□□□ -1.77
SPI1	YER150W	DIP5	P53388	608 aa		3.97	□□□□□ -1.77
SPI1	YER150W	YNL181W	P53878	407 aa		3.97	□□□□□ -1.77
SPI1	YER150W	RNT1	Q02555	471 aa		3.97	□□□□□ -1.77
SPI1	YER150W	YML037C	Q03703	340 aa		3.97	□□□□□ -1.77
SPI1	YER150W	VPS64	Q03944	604 aa		3.97	□□□□□ -1.77
SPI1	YER150W	APC4	Q04601	652 aa		3.97	□□□□□ -1.77
SPI1	YER150W	ADY4	Q05955	493 aa		3.97	□□□□□ -1.77
SPI1	YER150W	YPS7	Q06325	596 aa		3.97	□□□□□ -1.77
SPI1	YER150W	NRT1	Q08485	598 aa		3.97	□□□□□ -1.77
SPI1	YER150W	TMA16	Q08687	178 aa		3.97	□□□□□ -1.77
SPI1	YER150W	HRK1	Q08732	759 aa	Known RBP	3.97	□□□□□ -1.77
SPI1	YER150W	SUL2	Q12325	893 aa		3.97	□□□□□ -1.77
SPI1	YER150W	VCX1	Q99385	411 aa		3.97	□□□□□ -1.77
SPI1	YER150W	PRC1	P00729	532 aa		3.96	□□□□□ -1.78
SPI1	YER150W	GAL80	P04387	435 aa		3.96	□□□□□ -1.78
SPI1	YER150W	GAL3	P13045	520 aa		3.96	□□□□□ -1.78
SPI1	YER150W	KIN2	P13186	1147 aa	Known RBP	3.96	□□□□□ -1.78
SPI1	YER150W	COQ1	P18900	473 aa		3.96	□□□□□ -1.78
SPI1	YER150W	SAR1	P20606	190 aa	Known RBP	3.96	□□□□□ -1.78
SPI1	YER150W	SEC62	P21825	274 aa		3.96	□□□□□ -1.78
SPI1	YER150W	PEX1	P24004	1043 aa		3.96	□□□□□ -1.78
SPI1	YER150W	ATP7	P30902	174 aa		3.96	□□□□□ -1.78
SPI1	YER150W	GCD7	P32502	381 aa	Predicted RBP	3.96	□□□□□ -1.78
SPI1	YER150W	AIM29	P36154	155 aa		3.96	□□□□□ -1.78
SPI1	YER150W	APT2	P36973	181 aa		3.96	□□□□□ -1.78
SPI1	YER150W	YBR139W	P38109	508 aa		3.96	□□□□□ -1.78
SPI1	YER150W	SWC5	P38326	303 aa		3.96	□□□□□ -1.78
SPI1	YER150W	CCT6	P39079	546 aa		3.96	□□□□□ -1.78
SPI1	YER150W	PCL6	P40038	420 aa		3.96	□□□□□ -1.78
SPI1	YER150W	SER3	P40054	469 aa		3.96	□□□□□ -1.78
SPI1	YER150W	YER156C	P40093	338 aa	Known RBP	3.96	□□□□□ -1.78
SPI1	YER150W	ELO3	P40319	345 aa		3.96	□□□□□ -1.78
SPI1	YER150W	RFC4	P40339	323 aa	Known RBP	3.96	□□□□□ -1.78
SPI1	YER150W	FKH2	P41813	862 aa		3.96	□□□□□ -1.78
SPI1	YER150W	GSM1	P42950	618 aa		3.96	□□□□□ -1.78
SPI1	YER150W	NMD5	P46970	1048 aa		3.96	□□□□□ -1.78
SPI1	YER150W	SLX9	P53251	210 aa	Predicted RBP	3.96	□□□□□ -1.78
SPI1	YER150W	YNR040W	P53736	256 aa		3.96	□□□□□ -1.78
SPI1	YER150W	CUS2	P53830	285 aa	Predicted RBP	3.96	□□□□□ -1.78
SPI1	YER150W	INA17	Q02888	182 aa		3.96	□□□□□ -1.78
SPI1	YER150W	YDR179W-A	Q03983	463 aa		3.96	□□□□□ -1.78
SPI1	YER150W	TY1A-MR1	Q04215	440 aa		3.96	□□□□□ -1.78
SPI1	YER150W	ARP10	Q04549	284 aa		3.96	□□□□□ -1.78
SPI1	YER150W	SMA2	Q04658	369 aa		3.96	□□□□□ -1.78
SPI1	YER150W	YMR226C	Q05016	267 aa	Known RBP	3.96	□□□□□ -1.78
SPI1	YER150W	RRG8	Q06109	277 aa		3.96	□□□□□ -1.78
SPI1	YER150W	STP4	Q07351	490 aa		3.96	□□□□□ -1.78
SPI1	YER150W	RDR1	Q08904	546 aa		3.96	□□□□□ -1.78
SPI1	YER150W	BTS1	Q12051	335 aa		3.96	□□□□□ -1.78
SPI1	YER150W	YDL109C	Q12103	647 aa		3.96	□□□□□ -1.78
SPI1	YER150W	SLP1	Q12232	587 aa		3.96	□□□□□ -1.78
SPI1	YER150W	NDJ1	Q12366	352 aa		3.96	□□□□□ -1.78
SPI1	YER150W	SFG1	Q12507	346 aa		3.96	□□□□□ -1.78
SPI1	YER150W	DCP1	Q12517	231 aa	Predicted RBP	3.96	□□□□□ -1.78
SPI1	YER150W	MTR10	Q99189	972 aa		3.96	□□□□□ -1.78
SPI1	YER150W	TRP3	P00937	484 aa		3.95	□□□□□ -1.78
SPI1	YER150W	RNR2	P09938	399 aa	Known RBP	3.95	□□□□□ -1.78
SPI1	YER150W	NHP6B	P11633	99 aa	Known RBP	3.95	□□□□□ -1.78
SPI1	YER150W	PEP5	P12868	1029 aa		3.95	□□□□□ -1.78
SPI1	YER150W	SPO7	P18410	259 aa		3.95	□□□□□ -1.78
SPI1	YER150W	ARG1	P22768	420 aa		3.95	□□□□□ -1.78
SPI1	YER150W	YIH1	P25637	258 aa		3.95	□□□□□ -1.78
SPI1	YER150W	ICL1	P28240	557 aa	Predicted RBP	3.95	□□□□□ -1.78
SPI1	YER150W	IDH2	P28241	369 aa	Known RBP	3.95	□□□□□ -1.78
SPI1	YER150W	HXT3	P32466	567 aa	Known RBP	3.95	□□□□□ -1.78
SPI1	YER150W	SSE2	P32590	693 aa	Known RBP	3.95	□□□□□ -1.78
SPI1	YER150W	SPR1	P32603	445 aa		3.95	□□□□□ -1.78
SPI1	YER150W	TAT1	P38085	619 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms