RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	COS5	P47187	383 aa		5.67	□□□□□ -1.5
SNF11	YDR073W	YNL058C	P53947	316 aa		5.67	□□□□□ -1.5
SNF11	YDR073W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.67	□□□□□ -1.5	not detected
SNF11	YDR073W	WAR1	Q03631	944 aa		5.67	□□□□□ -1.5
SNF11	YDR073W	YMR130W	Q04223	302 aa		5.67	□□□□□ -1.5
SNF11	YDR073W	RAD33	Q04231	177 aa		5.67	□□□□□ -1.5
SNF11	YDR073W	CDA2	Q06703	312 aa		5.67	□□□□□ -1.5
SNF11	YDR073W	COS7	Q07788	383 aa		5.67	□□□□□ -1.5
SNF11	YDR073W	MED2	Q12124	431 aa		5.67	□□□□□ -1.5
SNF11	YDR073W	SPS4	P09937	338 aa		5.66	□□□□□ -1.5
SNF11	YDR073W	RPL31B	P0C2H9	113 aa	Known RBP	5.66	□□□□□ -1.5
SNF11	YDR073W	SPO7	P18410	259 aa		5.66	□□□□□ -1.5
SNF11	YDR073W	CLN1	P20437	546 aa		5.66	□□□□□ -1.5
SNF11	YDR073W	DAL80	P26343	269 aa		5.66	□□□□□ -1.5
SNF11	YDR073W	HRR25	P29295	494 aa	Known RBP	5.66	□□□□□ -1.5
SNF11	YDR073W	SUR1	P33300	382 aa		5.66	□□□□□ -1.5
SNF11	YDR073W	ARA1	P38115	344 aa		5.66	□□□□□ -1.5
SNF11	YDR073W	SUL1	P38359	859 aa		5.66	□□□□□ -1.5
SNF11	YDR073W	SER3	P40054	469 aa		5.66	□□□□□ -1.5
SNF11	YDR073W	YTA12	P40341	825 aa		5.66	□□□□□ -1.5
SNF11	YDR073W	CHS6	P40955	746 aa		5.66	□□□□□ -1.5
SNF11	YDR073W	EPL1	P43572	832 aa		5.66	□□□□□ -1.5
SNF11	YDR073W	YFR016C	P43597	1233 aa	Known RBP	5.66	□□□□□ -1.5
SNF11	YDR073W	SHE4	P51534	789 aa		5.66	□□□□□ -1.5
SNF11	YDR073W	CUE3	P53137	624 aa	Known RBP	5.66	□□□□□ -1.5
SNF11	YDR073W	CWC22	P53333	577 aa	Known RBP	5.66	□□□□□ -1.5
SNF11	YDR073W	ARO10	Q06408	635 aa		5.66	□□□□□ -1.5
SNF11	YDR073W	CDC45	Q08032	650 aa		5.66	□□□□□ -1.5
SNF11	YDR073W	ETT1	Q08421	412 aa	Known RBP	5.66	□□□□□ -1.5
SNF11	YDR073W	SLK19	Q08581	821 aa	Known RBP	5.66	□□□□□ -1.5
SNF11	YDR073W	LEA1	Q08963	238 aa	Predicted RBP	5.66	□□□□□ -1.5
SNF11	YDR073W	PMA1	P05030	918 aa	Known RBP	5.65	□□□□□ -1.5
SNF11	YDR073W	DAP2	P18962	818 aa		5.65	□□□□□ -1.5
SNF11	YDR073W	PTC6	P25646	442 aa		5.65	□□□□□ -1.5
SNF11	YDR073W	RAD14	P28519	371 aa		5.65	□□□□□ -1.5
SNF11	YDR073W	YIM1	P28625	365 aa		5.65	□□□□□ -1.5
SNF11	YDR073W	RIB7	P33312	244 aa		5.65	□□□□□ -1.5
SNF11	YDR073W	MMS4	P38257	691 aa		5.65	□□□□□ -1.5
SNF11	YDR073W	DBP8	P38719	431 aa		5.65	□□□□□ -1.5
SNF11	YDR073W	PCL5	P38794	229 aa		5.65	□□□□□ -1.5
SNF11	YDR073W	CIN4	P39110	191 aa		5.65	□□□□□ -1.5
SNF11	YDR073W	SMX3	P54999	86 aa	Predicted RBP	5.65	□□□□□ -1.5
SNF11	YDR073W	HBT1	Q07653	1046 aa	Known RBP	5.65	□□□□□ -1.5
SNF11	YDR073W	YLR040C	Q07988	224 aa		5.65	□□□□□ -1.5
SNF11	YDR073W	PCL8	Q08966	492 aa		5.65	□□□□□ -1.5
SNF11	YDR073W	NTO1	Q12311	748 aa		5.65	□□□□□ -1.5
SNF11	YDR073W	ARG81	P05085	880 aa		5.64	□□□□□ -1.51
SNF11	YDR073W	GRR1	P24814	1151 aa		5.64	□□□□□ -1.51
SNF11	YDR073W	GAC1	P28006	793 aa		5.64	□□□□□ -1.51
SNF11	YDR073W	GLG1	P36143	616 aa		5.64	□□□□□ -1.51
SNF11	YDR073W	RPL32	P38061	130 aa	Known RBP	5.64	□□□□□ -1.51
SNF11	YDR073W	TSC10	P38342	320 aa		5.64	□□□□□ -1.51
SNF11	YDR073W	IMD2	P38697	523 aa	Known RBP	5.64	□□□□□ -1.51
SNF11	YDR073W	YHR218W	P38899	603 aa		5.64	□□□□□ -1.51
SNF11	YDR073W	RPT4	P53549	437 aa	Known RBP	5.64	□□□□□ -1.51
SNF11	YDR073W	ERV25	P54837	211 aa	Known RBP	5.64	□□□□□ -1.51
SNF11	YDR073W	RPN9	Q04062	393 aa	Known RBP	5.64	□□□□□ -1.51
SNF11	YDR073W	EMI2	Q04409	500 aa	Known RBP	5.64	□□□□□ -1.51
SNF11	YDR073W	ECM30	Q06673	1274 aa		5.64	□□□□□ -1.51
SNF11	YDR073W	NOP6	Q07623	225 aa	Known RBP	5.64	□□□□□ -1.51
SNF11	YDR073W	RTT109	Q07794	436 aa		5.64	□□□□□ -1.51
SNF11	YDR073W	YOL159C	Q08300	171 aa		5.64	□□□□□ -1.51
SNF11	YDR073W	PDE2	P06776	526 aa		5.63	□□□□□ -1.51
SNF11	YDR073W	AFG1	P32317	509 aa		5.63	□□□□□ -1.51
SNF11	YDR073W	NIP1	P32497	812 aa	Known RBP	5.63	□□□□□ -1.51
SNF11	YDR073W	SRB2	P34162	210 aa		5.63	□□□□□ -1.51
SNF11	YDR073W	MRPL4	P36517	319 aa		5.63	□□□□□ -1.51
SNF11	YDR073W	PFF1	P38244	976 aa		5.63	□□□□□ -1.51
SNF11	YDR073W	FAD1	P38913	306 aa		5.63	□□□□□ -1.51
SNF11	YDR073W	OPT1	P40897	799 aa		5.63	□□□□□ -1.51
SNF11	YDR073W	ERG26	P53199	349 aa	Known RBP	5.63	□□□□□ -1.51
SNF11	YDR073W	AQR1	P53943	586 aa		5.63	□□□□□ -1.51
SNF11	YDR073W	TOF2	Q02208	771 aa		5.63	□□□□□ -1.51
SNF11	YDR073W	YMR160W	Q03823	816 aa		5.63	□□□□□ -1.51
SNF11	YDR073W	TAP42	Q04372	366 aa		5.63	□□□□□ -1.51
SNF11	YDR073W	COQ9	Q05779	260 aa		5.63	□□□□□ -1.51
SNF11	YDR073W	HRD3	Q05787	833 aa		5.63	□□□□□ -1.51
SNF11	YDR073W	DCS1	Q06151	350 aa		5.63	□□□□□ -1.51
SNF11	YDR073W	MRH1	Q12117	320 aa	Predicted RBP	5.63	□□□□□ -1.51
SNF11	YDR073W	UBX3	Q12229	455 aa		5.63	□□□□□ -1.51
SNF11	YDR073W	GLT1	Q12680	2145 aa	Known RBP	5.62	□□□□□ -1.51
SNF11	YDR073W	MRP2	P10663	115 aa	Predicted RBP	5.62	□□□□□ -1.51
SNF11	YDR073W	RAP1	P11938	827 aa		5.62	□□□□□ -1.51
SNF11	YDR073W	PCH2	P38126	564 aa		5.62	□□□□□ -1.51
SNF11	YDR073W	RIX1	P38883	763 aa	Predicted RBP	5.62	□□□□□ -1.51
SNF11	YDR073W	PHO23	P50947	330 aa		5.62	□□□□□ -1.51
SNF11	YDR073W	ARP5	P53946	755 aa		5.62	□□□□□ -1.51
SNF11	YDR073W	PRO2	P54885	456 aa	Known RBP	5.62	□□□□□ -1.51
SNF11	YDR073W	YMR178W	Q03219	274 aa	Known RBP	5.62	□□□□□ -1.51
SNF11	YDR073W	PFA5	Q03289	374 aa		5.62	□□□□□ -1.51
SNF11	YDR073W	APL5	Q08951	932 aa	Known RBP	5.62	□□□□□ -1.51
SNF11	YDR073W	VAM3	Q12241	283 aa		5.62	□□□□□ -1.51
SNF11	YDR073W	RRP36	Q12481	300 aa	Predicted RBP	5.62	□□□□□ -1.51
SNF11	YDR073W	NBL1	Q3E7Y6	73 aa		5.62	□□□□□ -1.51
SNF11	YDR073W	BUD5	P25300	642 aa	Predicted RBP	5.61	□□□□□ -1.51
SNF11	YDR073W	PHO91	P27514	894 aa		5.61	□□□□□ -1.51
SNF11	YDR073W	MCM4	P30665	933 aa	Known RBP	5.61	□□□□□ -1.51
SNF11	YDR073W	ZTA1	P38230	334 aa	Known RBP	5.61	□□□□□ -1.51
SNF11	YDR073W	BDH2	P39713	417 aa		5.61	□□□□□ -1.51
SNF11	YDR073W	YFL015C	P43578	164 aa		5.61	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 45 ms