RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W GIP4P39732 760 aa2.08□□□□□ -2.08
VPS8YAL002W VRG4P40107 337 aa2.08□□□□□ -2.08
VPS8YAL002W EFM4P40516 257 aa2.08□□□□□ -2.08
VPS8YAL002W RAD17P48581 401 aa2.08□□□□□ -2.08
VPS8YAL002W PHO23P50947 330 aa2.08□□□□□ -2.08
VPS8YAL002W YGL036WP53185 909 aaPredicted RBP2.08□□□□□ -2.08
VPS8YAL002W YGR266WP53326 701 aa2.08□□□□□ -2.08
VPS8YAL002W RQC1Q05468 723 aaKnown RBP2.08□□□□□ -2.08
VPS8YAL002W ECM30Q06673 1274 aa2.08□□□□□ -2.08
VPS8YAL002W TAO3P40468 2376 aa2.08□□□□□ -2.08
VPS8YAL002W SPE2P21182 396 aa2.07□□□□□ -2.08
VPS8YAL002W SNT1P25357 1226 aa2.07□□□□□ -2.08
VPS8YAL002W YIH1P25637 258 aa2.07□□□□□ -2.08
VPS8YAL002W PHO91P27514 894 aa2.07□□□□□ -2.08
VPS8YAL002W RPC37P36121 282 aa2.07□□□□□ -2.08
VPS8YAL002W RPF2P36160 344 aaKnown RBP2.07□□□□□ -2.08
VPS8YAL002W STV1P37296 890 aa2.07□□□□□ -2.08
VPS8YAL002W CTP1P38152 299 aa2.07□□□□□ -2.08
VPS8YAL002W CHS6P40955 746 aa2.07□□□□□ -2.08
VPS8YAL002W GCN20P43535 752 aaKnown RBP2.07□□□□□ -2.08
VPS8YAL002W ALK1P43633 760 aaKnown RBP2.07□□□□□ -2.08
VPS8YAL002W STU2P46675 888 aa2.07□□□□□ -2.08
VPS8YAL002W YAT1P80235 687 aa2.07□□□□□ -2.08
VPS8YAL002W EGD1Q02642 157 aaKnown RBP2.07□□□□□ -2.08
VPS8YAL002W SLU7Q02775 382 aaKnown RBP2.07□□□□□ -2.08
VPS8YAL002W MUB1Q03162 620 aa2.07□□□□□ -2.08
VPS8YAL002W USA1Q03714 838 aa2.07□□□□□ -2.08
VPS8YAL002W MSC3Q05812 728 aa2.07□□□□□ -2.08
VPS8YAL002W SPH1Q06160 661 aa2.07□□□□□ -2.08
VPS8YAL002W YLR049CQ12110 428 aa2.07□□□□□ -2.08
VPS8YAL002W YIL002W-AQ3E7Z5 69 aa2.07□□□□□ -2.08
VPS8YAL002W VCX1Q99385 411 aa2.07□□□□□ -2.08
VPS8YAL002W NUM1Q00402 2748 aa2.07□□□□□ -2.08
VPS8YAL002W VPS34P22543 875 aa2.07□□□□□ -2.08
VPS8YAL002W GRR1P24814 1151 aa2.07□□□□□ -2.08
VPS8YAL002W ERG4P25340 473 aa2.07□□□□□ -2.08
VPS8YAL002W SYN8P31377 255 aa2.07□□□□□ -2.08
VPS8YAL002W SMY1P32364 656 aaKnown RBP2.07□□□□□ -2.08
VPS8YAL002W EFB1P32471 206 aaKnown RBP2.07□□□□□ -2.08
VPS8YAL002W GDA1P32621 518 aa2.07□□□□□ -2.08
VPS8YAL002W YPT7P32939 208 aa2.07□□□□□ -2.08
VPS8YAL002W YHR054CP38780 354 aa2.07□□□□□ -2.08
VPS8YAL002W IMD4P50094 524 aaKnown RBP2.07□□□□□ -2.08
VPS8YAL002W MLC1P53141 149 aa2.07□□□□□ -2.08
VPS8YAL002W NGL2Q03264 515 aaKnown RBP2.07□□□□□ -2.08
VPS8YAL002W SOV1Q04748 898 aa2.07□□□□□ -2.08
VPS8YAL002W KAP95Q06142 861 aaKnown RBP2.07□□□□□ -2.08
VPS8YAL002W MCP2Q06567 569 aa2.07□□□□□ -2.08
VPS8YAL002W RTC1Q08281 1341 aa2.07□□□□□ -2.08
VPS8YAL002W SUP35P05453 685 aaKnown RBP2.07□□□□□ -2.08
VPS8YAL002W ARD1P07347 238 aaPredicted RBP2.07□□□□□ -2.08
VPS8YAL002W PDA1P16387 420 aaKnown RBP2.07□□□□□ -2.08
VPS8YAL002W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
VPS8YAL002W PEX18P38855 283 aa2.07□□□□□ -2.08
VPS8YAL002W SLZ1P40167 298 aa2.07□□□□□ -2.08
VPS8YAL002W ARG2P40360 574 aa2.07□□□□□ -2.08
VPS8YAL002W INA22P40576 216 aa2.07□□□□□ -2.08
VPS8YAL002W CAK1P43568 368 aaPredicted RBP2.07□□□□□ -2.08
VPS8YAL002W BPL1P48445 690 aaPredicted RBP2.07□□□□□ -2.08
VPS8YAL002W ALT2P52892 507 aa2.07□□□□□ -2.08
VPS8YAL002W YEH1Q07804 573 aa2.07□□□□□ -2.08
VPS8YAL002W TOR2P32600 2474 aaKnown RBP2.06□□□□□ -2.08
VPS8YAL002W SRB8P25648 1427 aa2.06□□□□□ -2.08
VPS8YAL002W RPL1AP0CX43 217 aaKnown RBP2.06□□□□□ -2.08
VPS8YAL002W RPL1BP0CX44 217 aaKnown RBP2.06□□□□□ -2.08
VPS8YAL002W MER1P16523 270 aa2.06□□□□□ -2.08
VPS8YAL002W ADH7P25377 361 aa2.06□□□□□ -2.08
VPS8YAL002W IDH2P28241 369 aaKnown RBP2.06□□□□□ -2.08
VPS8YAL002W LAC1P28496 418 aa2.06□□□□□ -2.08
VPS8YAL002W SPC110P32380 944 aa2.06□□□□□ -2.08
VPS8YAL002W GSH1P32477 678 aa2.06□□□□□ -2.08
VPS8YAL002W PUB1P32588 453 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
VPS8YAL002W YSW1P38280 609 aa2.06□□□□□ -2.08
VPS8YAL002W DED81P38707 554 aaKnown RBP2.06□□□□□ -2.08
VPS8YAL002W WSS1P38838 269 aa2.06□□□□□ -2.08
VPS8YAL002W LOC1P43586 204 aaPredicted RBP2.06□□□□□ -2.08
VPS8YAL002W YFR020WP43600 232 aa2.06□□□□□ -2.08
VPS8YAL002W PET130P47065 347 aa2.06□□□□□ -2.08
VPS8YAL002W APT1P49435 187 aaKnown RBP2.06□□□□□ -2.08
VPS8YAL002W UBC11P52492 156 aa2.06□□□□□ -2.08
VPS8YAL002W LSB1P53281 241 aa2.06□□□□□ -2.08
VPS8YAL002W INN1P53901 409 aa2.06□□□□□ -2.08
VPS8YAL002W YNL144CP53907 740 aa2.06□□□□□ -2.08
VPS8YAL002W KAP120Q02932 1032 aa2.06□□□□□ -2.08
VPS8YAL002W TAP42Q04372 366 aa2.06□□□□□ -2.08
VPS8YAL002W ROY1Q04847 553 aa2.06□□□□□ -2.08
VPS8YAL002W IZH3Q07959 543 aa2.06□□□□□ -2.08
VPS8YAL002W YPL272CQ08984 517 aa2.06□□□□□ -2.08
VPS8YAL002W MRH1Q12117 320 aaPredicted RBP2.06□□□□□ -2.08
VPS8YAL002W NBL1Q3E7Y6 73 aa2.06□□□□□ -2.08
VPS8YAL002W MF(ALPHA)1P01149 165 aa2.06□□□□□ -2.08
VPS8YAL002W RPL6BP05739 176 aaKnown RBP2.06□□□□□ -2.08
VPS8YAL002W YCR061WP25639 631 aa2.06□□□□□ -2.08
VPS8YAL002W SEC66P33754 206 aa2.06□□□□□ -2.08
VPS8YAL002W PMT1P33775 817 aa2.06□□□□□ -2.08
VPS8YAL002W YUH1P35127 236 aa2.06□□□□□ -2.08
VPS8YAL002W NDC80P40460 691 aa2.06□□□□□ -2.08
VPS8YAL002W ADE16P54113 591 aaKnown RBP2.06□□□□□ -2.08
VPS8YAL002W RPA49Q01080 415 aaPredicted RBP2.06□□□□□ -2.08
VPS8YAL002W RPL6AQ02326 176 aaKnown RBP2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms