RNA–Protein interactions for RNA: YPL019C

VTC3, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC3, Length 2,508 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC3	YPL019C	BET4	Q00618	327 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	SLU7	Q02775	382 aa	Known RBP	2.42	□□□□□ -2.02
VTC3	YPL019C	YPR196W	Q06595	470 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	YTM1	Q12024	460 aa	Predicted RBP	2.42	□□□□□ -2.02
VTC3	YPL019C	CWC2	Q12046	339 aa	Predicted RBP	2.42	□□□□□ -2.02
VTC3	YPL019C	YDL177C	Q12257	170 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	SEY1	Q99287	776 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	SPS1	P08458	490 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	PRP4	P20053	465 aa	Known RBP	2.42	□□□□□ -2.02
VTC3	YPL019C	MSB1	P21339	1137 aa	Known RBP	2.42	□□□□□ -2.02
VTC3	YPL019C	ATP12	P22135	325 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	TRX1	P22217	103 aa	Known RBP	2.42	□□□□□ -2.02
VTC3	YPL019C	AAT2	P23542	418 aa	Known RBP	2.42	□□□□□ -2.02
VTC3	YPL019C	PPH21	P23594	369 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	HEM12	P32347	362 aa	Predicted RBP	2.42	□□□□□ -2.02
VTC3	YPL019C	STE14	P32584	239 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	MIC60	P36112	540 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	YKR073C	P36153	106 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	TAT1	P38085	619 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	SMF1	P38925	575 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	IES5	P40060	125 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	TMN3	P40071	706 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	RAI1	P53063	387 aa	Known RBP	2.42	□□□□□ -2.02
VTC3	YPL019C	PCL10	P53124	433 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	YDR222W	Q04925	415 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	SWC7	Q06707	132 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	REH1	Q06709	432 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	CMS1	Q07897	291 aa	Known RBP	2.42	□□□□□ -2.02
VTC3	YPL019C	PGC1	Q08959	321 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	VPS68	Q12016	184 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	EFG1	Q3E705	233 aa	Known RBP	2.42	□□□□□ -2.02
VTC3	YPL019C	YPR053C	Q6Q5F3	151 aa		2.42	□□□□□ -2.02
VTC3	YPL019C	PCT1	P13259	424 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	GFA1	P14742	717 aa	Known RBP	2.41	□□□□□ -2.02
VTC3	YPL019C	RPC82	P32349	654 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	SPR1	P32603	445 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	CYM1	P32898	989 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	YKL050C	P35736	922 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	YAL037W	P39728	267 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	IST3	P40565	148 aa	Predicted RBP	2.41	□□□□□ -2.02
VTC3	YPL019C	ROK1	P45818	564 aa	Predicted RBP	2.41	□□□□□ -2.02
VTC3	YPL019C	CTK3	P46963	296 aa	Predicted RBP	2.41	□□□□□ -2.02
VTC3	YPL019C	ZIP2	P53061	704 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	YGL108C	P53139	140 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	SWC4	P53201	476 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	YGR012W	P53206	393 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	VAC7	P53950	1165 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	VPS9	P54787	451 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	DIC1	Q06143	298 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	HBT1	Q07653	1046 aa	Known RBP	2.41	□□□□□ -2.02
VTC3	YPL019C	TPO1	Q07824	586 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	YPR089W	O13585	888 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	TUB1	P09733	447 aa	Known RBP	2.41	□□□□□ -2.02
VTC3	YPL019C	SCL1	P21243	252 aa	Known RBP	2.41	□□□□□ -2.02
VTC3	YPL019C	UBA1	P22515	1024 aa	Known RBP	2.41	□□□□□ -2.02
VTC3	YPL019C	ALY1	P36117	915 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	JNM1	P36224	373 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	PIM1	P36775	1133 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	BIT2	P38346	545 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	AIM18	P38884	321 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	SMC2	P38989	1170 aa	Known RBP	2.41	□□□□□ -2.02
VTC3	YPL019C	RPH1	P39956	796 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	FAU1	P40099	211 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	RET2	P43621	546 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	BNA2	P47125	453 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	BIR1	P47134	954 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	TRF5	P48561	642 aa	Known RBP	2.41	□□□□□ -2.02
VTC3	YPL019C	RFX1	P48743	811 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	YNL040W	P53960	456 aa	Predicted RBP	2.41	□□□□□ -2.02
VTC3	YPL019C	SVL3	Q03088	825 aa	Known RBP	2.41	□□□□□ -2.02
VTC3	YPL019C	ENT5	Q03769	411 aa	Known RBP	2.41	□□□□□ -2.02
VTC3	YPL019C	CRR1	Q05790	422 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	VID22	Q05934	901 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	LDB18	Q07887	179 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	PLB3	Q08108	686 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	YOL024W	Q08172	172 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	2.41	□□□□□ -2.02	not detected
VTC3	YPL019C	TGL5	Q12043	749 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	LSP1	Q12230	341 aa	Known RBP	2.41	□□□□□ -2.02
VTC3	YPL019C	IZH4	Q99393	312 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	TRA1	P38811	3744 aa		2.41	□□□□□ -2.02
VTC3	YPL019C	CYC1	P00044	109 aa	Predicted RBP	2.4	□□□□□ -2.02
VTC3	YPL019C	IPP1	P00817	287 aa	Known RBP	2.4	□□□□□ -2.02
VTC3	YPL019C	GAL1	P04385	528 aa		2.4	□□□□□ -2.02
VTC3	YPL019C	GLN4	P13188	809 aa	Known RBP	2.4	□□□□□ -2.02
VTC3	YPL019C	CLC1	P17891	233 aa		2.4	□□□□□ -2.02
VTC3	YPL019C	RFA1	P22336	621 aa	Known RBP	2.4	□□□□□ -2.02
VTC3	YPL019C	RBK1	P25332	333 aa		2.4	□□□□□ -2.02
VTC3	YPL019C	MRS6	P32864	603 aa	Known RBP	2.4	□□□□□ -2.02
VTC3	YPL019C	TAF14	P35189	244 aa		2.4	□□□□□ -2.02
VTC3	YPL019C	UTP20	P35194	2493 aa	Known RBP	2.4	□□□□□ -2.02
VTC3	YPL019C	OAF3	P36023	863 aa		2.4	□□□□□ -2.02
VTC3	YPL019C	PCA1	P38360	1216 aa		2.4	□□□□□ -2.02
VTC3	YPL019C	MND2	P40577	368 aa		2.4	□□□□□ -2.02
VTC3	YPL019C	ZIM17	P42844	174 aa		2.4	□□□□□ -2.02
VTC3	YPL019C	RRT5	P43607	289 aa		2.4	□□□□□ -2.02
VTC3	YPL019C	BUD13	P46947	266 aa	Predicted RBP	2.4	□□□□□ -2.02
VTC3	YPL019C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	2.4	□□□□□ -2.02	not detected
VTC3	YPL019C	GSF2	Q04697	403 aa	Known RBP	2.4	□□□□□ -2.02
VTC3	YPL019C	CIA1	Q05583	330 aa		2.4	□□□□□ -2.02

Retrieved 100 of 5,963 RNA–protein pairs in 98.3 ms