RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeast

Gene RET3, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RET3	YPL010W	PHO12	P38693	467 aa		4.08	□□□□□ -1.76
RET3	YPL010W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
RET3	YPL010W	PAC2	P39937	518 aa		4.08	□□□□□ -1.76
RET3	YPL010W	PHO86	P46956	311 aa		4.08	□□□□□ -1.76
RET3	YPL010W	NNF1	P47149	201 aa		4.08	□□□□□ -1.76
RET3	YPL010W	YGR237C	P50089	785 aa		4.08	□□□□□ -1.76
RET3	YPL010W	TAN1	P53072	289 aa	Predicted RBP	4.08	□□□□□ -1.76
RET3	YPL010W	COG7	P53195	279 aa		4.08	□□□□□ -1.76
RET3	YPL010W	PEX31	P53203	462 aa		4.08	□□□□□ -1.76
RET3	YPL010W	PRM1	P53835	661 aa		4.08	□□□□□ -1.76
RET3	YPL010W	ESBP6	P53918	673 aa		4.08	□□□□□ -1.76
RET3	YPL010W	KTR6	P54070	446 aa		4.08	□□□□□ -1.76
RET3	YPL010W	SNP1	Q00916	300 aa	Predicted RBP	4.08	□□□□□ -1.76
RET3	YPL010W	REC102	Q02721	264 aa		4.08	□□□□□ -1.76
RET3	YPL010W	YMR178W	Q03219	274 aa	Known RBP	4.08	□□□□□ -1.76
RET3	YPL010W	EBS1	Q03466	884 aa	Known RBP	4.08	□□□□□ -1.76
RET3	YPL010W	ETT1	Q08421	412 aa	Known RBP	4.08	□□□□□ -1.76
RET3	YPL010W	SRO7	Q12038	1033 aa		4.08	□□□□□ -1.76
RET3	YPL010W	RKM5	Q12367	367 aa		4.08	□□□□□ -1.76
RET3	YPL010W	CDC37	P06101	506 aa	Known RBP	4.07	□□□□□ -1.76
RET3	YPL010W	YKR104W	P0CE69	306 aa		4.07	□□□□□ -1.76
RET3	YPL010W	YPK1	P12688	680 aa	Known RBP	4.07	□□□□□ -1.76
RET3	YPL010W	PUT4	P15380	627 aa		4.07	□□□□□ -1.76
RET3	YPL010W	DAL82	P21705	255 aa		4.07	□□□□□ -1.76
RET3	YPL010W	PTP1	P25044	335 aa		4.07	□□□□□ -1.76
RET3	YPL010W	GYP6	P32806	458 aa		4.07	□□□□□ -1.76
RET3	YPL010W	PMT1	P33775	817 aa		4.07	□□□□□ -1.76
RET3	YPL010W	ELO1	P39540	310 aa		4.07	□□□□□ -1.76
RET3	YPL010W	PTI1	P39927	425 aa	Predicted RBP	4.07	□□□□□ -1.76
RET3	YPL010W	SNZ3	P43545	298 aa		4.07	□□□□□ -1.76
RET3	YPL010W	YPT11	P48559	417 aa		4.07	□□□□□ -1.76
RET3	YPL010W	MRK1	P50873	501 aa		4.07	□□□□□ -1.76
RET3	YPL010W	SNZ2	P53824	298 aa		4.07	□□□□□ -1.76
RET3	YPL010W	SND1	Q04007	877 aa		4.07	□□□□□ -1.76
RET3	YPL010W	PPN1	Q04119	674 aa		4.07	□□□□□ -1.76
RET3	YPL010W	GRX8	Q05926	109 aa		4.07	□□□□□ -1.76
RET3	YPL010W	AFT2	Q08957	416 aa		4.07	□□□□□ -1.76
RET3	YPL010W	MLH3	Q12083	715 aa		4.07	□□□□□ -1.76
RET3	YPL010W	PEX11	Q12462	236 aa		4.07	□□□□□ -1.76
RET3	YPL010W	PRP8	P33334	2413 aa	Known RBP	4.07	□□□□□ -1.76
RET3	YPL010W	RIP1	P08067	215 aa		4.06	□□□□□ -1.76
RET3	YPL010W	ABF1	P14164	731 aa		4.06	□□□□□ -1.76
RET3	YPL010W	MET16	P18408	261 aa	Predicted RBP	4.06	□□□□□ -1.76
RET3	YPL010W	MNE1	P24720	663 aa		4.06	□□□□□ -1.76
RET3	YPL010W	SNT1	P25357	1226 aa		4.06	□□□□□ -1.76
RET3	YPL010W	MRC1	P25588	1096 aa		4.06	□□□□□ -1.76
RET3	YPL010W	CWP1	P28319	239 aa		4.06	□□□□□ -1.76
RET3	YPL010W	YHL041W	P38730	149 aa		4.06	□□□□□ -1.76
RET3	YPL010W	FSH1	P38777	243 aa	Known RBP	4.06	□□□□□ -1.76
RET3	YPL010W	EDC3	P39998	551 aa	Known RBP	4.06	□□□□□ -1.76
RET3	YPL010W	CCT5	P40413	562 aa	Known RBP	4.06	□□□□□ -1.76
RET3	YPL010W	AIP1	P46680	615 aa	Known RBP	4.06	□□□□□ -1.76
RET3	YPL010W	PIR1	Q03178	341 aa		4.06	□□□□□ -1.76
RET3	YPL010W	INP2	Q03824	705 aa		4.06	□□□□□ -1.76
RET3	YPL010W	SXM1	Q04175	944 aa	Known RBP	4.06	□□□□□ -1.76
RET3	YPL010W	ARA2	Q04212	335 aa		4.06	□□□□□ -1.76
RET3	YPL010W	VMS1	Q04311	632 aa	Known RBP	4.06	□□□□□ -1.76
RET3	YPL010W	GFD1	Q04839	188 aa	Known RBP	4.06	□□□□□ -1.76
RET3	YPL010W	THI7	Q05998	598 aa		4.06	□□□□□ -1.76
RET3	YPL010W	YPR114W	Q06107	315 aa		4.06	□□□□□ -1.76
RET3	YPL010W	YAP7	Q08182	245 aa		4.06	□□□□□ -1.76
RET3	YPL010W	TRE2	Q08693	809 aa		4.06	□□□□□ -1.76
RET3	YPL010W	YOR389W	Q08912	624 aa		4.06	□□□□□ -1.76
RET3	YPL010W	YPL278C	Q08990	100 aa		4.06	□□□□□ -1.76
RET3	YPL010W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
RET3	YPL010W	YDR061W	Q12298	539 aa		4.06	□□□□□ -1.76
RET3	YPL010W	SKM1	Q12469	655 aa		4.06	□□□□□ -1.76
RET3	YPL010W	RED1	P14291	827 aa		4.05	□□□□□ -1.76
RET3	YPL010W	THR1	P17423	357 aa	Known RBP	4.05	□□□□□ -1.76
RET3	YPL010W	MDM10	P18409	493 aa		4.05	□□□□□ -1.76
RET3	YPL010W	SEC15	P22224	910 aa		4.05	□□□□□ -1.76
RET3	YPL010W	SEC1	P30619	724 aa	Known RBP	4.05	□□□□□ -1.76
RET3	YPL010W	SPC110	P32380	944 aa		4.05	□□□□□ -1.76
RET3	YPL010W	KAR9	P32526	644 aa		4.05	□□□□□ -1.76
RET3	YPL010W	NIP100	P33420	868 aa		4.05	□□□□□ -1.76
RET3	YPL010W	ADE17	P38009	592 aa	Known RBP	4.05	□□□□□ -1.76
RET3	YPL010W	KAP104	P38217	918 aa	Known RBP	4.05	□□□□□ -1.76
RET3	YPL010W	TAE1	P38340	232 aa		4.05	□□□□□ -1.76
RET3	YPL010W	MSR1	P38714	643 aa		4.05	□□□□□ -1.76
RET3	YPL010W	YER130C	P39959	443 aa		4.05	□□□□□ -1.76
RET3	YPL010W	GET2	P40056	285 aa		4.05	□□□□□ -1.76
RET3	YPL010W	RAD26	P40352	1085 aa		4.05	□□□□□ -1.76
RET3	YPL010W	HYR1	P40581	163 aa	Known RBP	4.05	□□□□□ -1.76
RET3	YPL010W	RPS10B	P46784	105 aa	Known RBP	4.05	□□□□□ -1.76
RET3	YPL010W	CIS3	P47001	227 aa		4.05	□□□□□ -1.76
RET3	YPL010W	GLG2	P47011	380 aa		4.05	□□□□□ -1.76
RET3	YPL010W	YJL132W	P47014	750 aa		4.05	□□□□□ -1.76
RET3	YPL010W	MNT2	P53059	558 aa		4.05	□□□□□ -1.76
RET3	YPL010W	EMC4	P53073	190 aa		4.05	□□□□□ -1.76
RET3	YPL010W	SUR7	P54003	302 aa		4.05	□□□□□ -1.76
RET3	YPL010W	TGL2	P54857	326 aa		4.05	□□□□□ -1.76
RET3	YPL010W	RSM10	Q03201	203 aa		4.05	□□□□□ -1.76
RET3	YPL010W	RPC11	Q04307	110 aa	Predicted RBP	4.05	□□□□□ -1.76
RET3	YPL010W	YPR078C	Q06813	372 aa		4.05	□□□□□ -1.76
RET3	YPL010W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
RET3	YPL010W	ATG10	Q07879	167 aa		4.05	□□□□□ -1.76
RET3	YPL010W	RPS10A	Q08745	105 aa	Predicted RBP	4.05	□□□□□ -1.76
RET3	YPL010W	ZRT2	Q12436	422 aa		4.05	□□□□□ -1.76
RET3	YPL010W	GPA1	P08539	472 aa		4.04	□□□□□ -1.76
RET3	YPL010W	PMA2	P19657	947 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms