RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C DFR1P07807 211 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
CTF18YMR078C ELO2P25358 347 aa5.17□□□□□ -1.58
CTF18YMR078C UBP11P36026 717 aa5.17□□□□□ -1.58
CTF18YMR078C MET18P40469 1032 aa5.17□□□□□ -1.58
CTF18YMR078C DOT5P40553 215 aa5.17□□□□□ -1.58
CTF18YMR078C ARF3P40994 183 aaRIP-Chip data5.17□□□□□ -1.58not detected
CTF18YMR078C YGR250CP53316 781 aaKnown RBP5.17□□□□□ -1.58
CTF18YMR078C RSM23Q01163 450 aa5.17□□□□□ -1.58
CTF18YMR078C VPS38Q05919 439 aa5.17□□□□□ -1.58
CTF18YMR078C HER1Q12276 1246 aa5.17□□□□□ -1.58
CTF18YMR078C GAL80P04387 435 aa5.16□□□□□ -1.58
CTF18YMR078C AIM17P23180 465 aaKnown RBP5.16□□□□□ -1.58
CTF18YMR078C MTR2P34232 184 aaKnown RBP5.16□□□□□ -1.58
CTF18YMR078C DBP8P38719 431 aa5.16□□□□□ -1.58
CTF18YMR078C JJJ1P53863 590 aa5.16□□□□□ -1.58
CTF18YMR078C IPI3P53877 555 aa5.16□□□□□ -1.58
CTF18YMR078C SCM3Q12334 223 aa5.16□□□□□ -1.58
CTF18YMR078C SEF1P34228 1148 aa5.16□□□□□ -1.58
CTF18YMR078C VID30P53076 958 aa5.16□□□□□ -1.58
CTF18YMR078C ARP10Q04549 284 aa5.16□□□□□ -1.58
CTF18YMR078C YLR287CQ05881 355 aa5.16□□□□□ -1.58
CTF18YMR078C ETT1Q08421 412 aaKnown RBP5.16□□□□□ -1.58
CTF18YMR078C NCE102Q12207 173 aaRIP-Chip data5.16□□□□□ -1.58not detected
CTF18YMR078C EDE1P34216 1381 aa5.15□□□□□ -1.58
CTF18YMR078C FOB1O13329 566 aa5.15□□□□□ -1.58
CTF18YMR078C BUD5P25300 642 aaPredicted RBP5.15□□□□□ -1.58
CTF18YMR078C YKL100CP34248 587 aa5.15□□□□□ -1.58
CTF18YMR078C ROK1P45818 564 aaPredicted RBP5.15□□□□□ -1.58
CTF18YMR078C VPS25P47142 202 aa5.15□□□□□ -1.58
CTF18YMR078C STP1Q00947 519 aa5.15□□□□□ -1.58
CTF18YMR078C COQ9Q05779 260 aa5.15□□□□□ -1.58
CTF18YMR078C ECM30Q06673 1274 aa5.15□□□□□ -1.58
CTF18YMR078C POS5Q06892 414 aa5.15□□□□□ -1.58
CTF18YMR078C ATX2Q12067 313 aa5.15□□□□□ -1.58
CTF18YMR078C RPL42AP0CX27 106 aaKnown RBP5.15□□□□□ -1.59
CTF18YMR078C RPL42BP0CX28 106 aaKnown RBP5.15□□□□□ -1.59
CTF18YMR078C SNF3P10870 884 aa5.15□□□□□ -1.59
CTF18YMR078C NPL6P32832 435 aa5.15□□□□□ -1.59
CTF18YMR078C RKM3P38222 552 aa5.15□□□□□ -1.59
CTF18YMR078C ALG5P40350 334 aa5.15□□□□□ -1.59
CTF18YMR078C NET1P47035 1189 aa5.15□□□□□ -1.59
CTF18YMR078C YGR127WP53275 312 aa5.15□□□□□ -1.59
CTF18YMR078C SYF1Q04048 859 aaPredicted RBP5.15□□□□□ -1.59
CTF18YMR078C MRD1Q06106 887 aaKnown RBP5.15□□□□□ -1.59
CTF18YMR078C AVL9Q12500 764 aa5.15□□□□□ -1.59
CTF18YMR078C RED1P14291 827 aa5.14□□□□□ -1.59
CTF18YMR078C ART10P18634 518 aaKnown RBP5.14□□□□□ -1.59
CTF18YMR078C SGV1P23293 657 aaKnown RBP5.14□□□□□ -1.59
CTF18YMR078C BOS1P25385 244 aa5.14□□□□□ -1.59
CTF18YMR078C GND1P38720 489 aaKnown RBP5.14□□□□□ -1.59
CTF18YMR078C PTR3P43606 678 aa5.14□□□□□ -1.59
CTF18YMR078C PET130P47065 347 aa5.14□□□□□ -1.59
CTF18YMR078C YDL218WQ07629 317 aa5.14□□□□□ -1.59
CTF18YMR078C GSH2Q08220 491 aa5.14□□□□□ -1.59
CTF18YMR078C RTN2Q12443 393 aa5.14□□□□□ -1.59
CTF18YMR078C ARG81P05085 880 aa5.13□□□□□ -1.59
CTF18YMR078C PDA1P16387 420 aaKnown RBP5.13□□□□□ -1.59
CTF18YMR078C PRD1P25375 712 aa5.13□□□□□ -1.59
CTF18YMR078C GPI10P30777 616 aa5.13□□□□□ -1.59
CTF18YMR078C UTP9P38882 575 aaKnown RBP5.13□□□□□ -1.59
CTF18YMR078C PHO90P39535 881 aa5.13□□□□□ -1.59
CTF18YMR078C DRN1P53255 507 aaKnown RBP5.13□□□□□ -1.59
CTF18YMR078C BOP3P53958 396 aa5.13□□□□□ -1.59
CTF18YMR078C NUP100Q02629 959 aa5.13□□□□□ -1.59
CTF18YMR078C MCP2Q06567 569 aa5.13□□□□□ -1.59
CTF18YMR078C YOL159C-AQ3E769 90 aa5.13□□□□□ -1.59
CTF18YMR078C YPR089WO13585 888 aa5.13□□□□□ -1.59
CTF18YMR078C PMS1P14242 873 aa5.13□□□□□ -1.59
CTF18YMR078C YMR124WP39523 943 aaKnown RBP5.13□□□□□ -1.59
CTF18YMR078C LSM5P40089 93 aaKnown RBP5.13□□□□□ -1.59
CTF18YMR078C IZH1Q03419 316 aa5.13□□□□□ -1.59
CTF18YMR078C CBP1P07252 654 aa5.12□□□□□ -1.59
CTF18YMR078C PTP1P25044 335 aa5.12□□□□□ -1.59
CTF18YMR078C MRE11P32829 692 aa5.12□□□□□ -1.59
CTF18YMR078C RPL32P38061 130 aaKnown RBP5.12□□□□□ -1.59
CTF18YMR078C ICS2P38284 255 aa5.12□□□□□ -1.59
CTF18YMR078C STV1P37296 890 aa5.12□□□□□ -1.59
CTF18YMR078C CST26P38226 397 aa5.12□□□□□ -1.59
CTF18YMR078C SMF1P38925 575 aa5.12□□□□□ -1.59
CTF18YMR078C EKI1Q03764 534 aa5.12□□□□□ -1.59
CTF18YMR078C FIN1Q03898 291 aa5.12□□□□□ -1.59
CTF18YMR078C RRG1Q12167 365 aaPredicted RBP5.12□□□□□ -1.59
CTF18YMR078C RPS2P25443 254 aaKnown RBP5.11□□□□□ -1.59
CTF18YMR078C MUM2P38236 366 aa5.11□□□□□ -1.59
CTF18YMR078C VTC2P43585 828 aa5.11□□□□□ -1.59
CTF18YMR078C ESBP6P53918 673 aa5.11□□□□□ -1.59
CTF18YMR078C YML122CQ03207 126 aa5.11□□□□□ -1.59
CTF18YMR078C RPB8P20436 146 aa5.11□□□□□ -1.59
CTF18YMR078C YPT53P36019 220 aa5.11□□□□□ -1.59
CTF18YMR078C SCO2P38072 301 aa5.11□□□□□ -1.59
CTF18YMR078C VID24P38263 362 aa5.11□□□□□ -1.59
CTF18YMR078C AIM22P47051 409 aa5.11□□□□□ -1.59
CTF18YMR078C CTL1Q03220 320 aaKnown RBP5.11□□□□□ -1.59
CTF18YMR078C MFT1P33441 392 aaKnown RBP5.1□□□□□ -1.59
CTF18YMR078C VRG4P40107 337 aa5.1□□□□□ -1.59
CTF18YMR078C SOL4P53315 255 aa5.1□□□□□ -1.59
CTF18YMR078C GEP3Q08622 556 aa5.1□□□□□ -1.59
CTF18YMR078C PEP4P07267 405 aaKnown RBP5.09□□□□□ -1.59
CTF18YMR078C MSR1P38714 643 aa5.09□□□□□ -1.59
CTF18YMR078C YMR155WQ03795 547 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms