RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W SWT1Q12104 458 aa2.5□□□□□ -2.01
HRD3YLR207W YOR019WQ99248 730 aa2.5□□□□□ -2.01
HRD3YLR207W YBR085C-AO43137 85 aa2.5□□□□□ -2.01
HRD3YLR207W SUP35P05453 685 aaKnown RBP2.5□□□□□ -2.01
HRD3YLR207W CPR2P23285 205 aa2.5□□□□□ -2.01
HRD3YLR207W PHO84P25297 587 aaKnown RBP2.5□□□□□ -2.01
HRD3YLR207W POT1P27796 417 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
HRD3YLR207W MSP1P28737 362 aa2.5□□□□□ -2.01
HRD3YLR207W HRR25P29295 494 aaKnown RBP2.5□□□□□ -2.01
HRD3YLR207W SSE1P32589 693 aaKnown RBP2.5□□□□□ -2.01
HRD3YLR207W UIP5P36137 443 aa2.5□□□□□ -2.01
HRD3YLR207W MRPL7P36519 292 aa2.5□□□□□ -2.01
HRD3YLR207W SUL1P38359 859 aa2.5□□□□□ -2.01
HRD3YLR207W PIH1P38768 344 aa2.5□□□□□ -2.01
HRD3YLR207W MTG2P38860 518 aa2.5□□□□□ -2.01
HRD3YLR207W HRB1P38922 454 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
HRD3YLR207W INP52P50942 1183 aa2.5□□□□□ -2.01
HRD3YLR207W YGL242CP53066 181 aa2.5□□□□□ -2.01
HRD3YLR207W TAM41P53230 385 aa2.5□□□□□ -2.01
HRD3YLR207W UFO1Q04511 668 aa2.5□□□□□ -2.01
HRD3YLR207W ROY1Q04847 553 aa2.5□□□□□ -2.01
HRD3YLR207W VPS38Q05919 439 aa2.5□□□□□ -2.01
HRD3YLR207W MLH2Q07980 695 aa2.5□□□□□ -2.01
HRD3YLR207W SGT2Q12118 346 aaKnown RBP2.5□□□□□ -2.01
HRD3YLR207W SKS1Q12505 502 aa2.5□□□□□ -2.01
HRD3YLR207W VCX1Q99385 411 aa2.5□□□□□ -2.01
HRD3YLR207W ALG7P07286 448 aa2.49□□□□□ -2.01
HRD3YLR207W KAR3P17119 729 aa2.49□□□□□ -2.01
HRD3YLR207W HPR1P17629 752 aaKnown RBP2.49□□□□□ -2.01
HRD3YLR207W GRR1P24814 1151 aa2.49□□□□□ -2.01
HRD3YLR207W YCR061WP25639 631 aa2.49□□□□□ -2.01
HRD3YLR207W GYP6P32806 458 aa2.49□□□□□ -2.01
HRD3YLR207W PTK1P36002 662 aaPredicted RBP2.49□□□□□ -2.01
HRD3YLR207W DAD2P36162 133 aa2.49□□□□□ -2.01
HRD3YLR207W CCL1P37366 393 aa2.49□□□□□ -2.01
HRD3YLR207W WSS1P38838 269 aa2.49□□□□□ -2.01
HRD3YLR207W MET28P40573 187 aa2.49□□□□□ -2.01
HRD3YLR207W IME4P41833 600 aa2.49□□□□□ -2.01
HRD3YLR207W MAF1P41910 395 aa2.49□□□□□ -2.01
HRD3YLR207W VID30P53076 958 aa2.49□□□□□ -2.01
HRD3YLR207W TOF1P53840 1238 aa2.49□□□□□ -2.01
HRD3YLR207W INN1P53901 409 aa2.49□□□□□ -2.01
HRD3YLR207W SPH1Q06160 661 aa2.49□□□□□ -2.01
HRD3YLR207W ATG23Q06671 453 aa2.49□□□□□ -2.01
HRD3YLR207W DCI1Q08558 271 aa2.49□□□□□ -2.01
HRD3YLR207W ATG29Q12092 213 aa2.49□□□□□ -2.01
HRD3YLR207W MDY2Q12285 212 aa2.49□□□□□ -2.01
HRD3YLR207W CEX1Q12453 761 aa2.49□□□□□ -2.01
HRD3YLR207W LYS2P07702 1392 aa2.49□□□□□ -2.01
HRD3YLR207W GAL80P04387 435 aa2.49□□□□□ -2.01
HRD3YLR207W URA7P28274 579 aaKnown RBP2.49□□□□□ -2.01
HRD3YLR207W RIB7P33312 244 aa2.49□□□□□ -2.01
HRD3YLR207W SIF2P38262 535 aa2.49□□□□□ -2.01
HRD3YLR207W SDH8P38345 138 aa2.49□□□□□ -2.01
HRD3YLR207W GND1P38720 489 aaKnown RBP2.49□□□□□ -2.01
HRD3YLR207W ARG2P40360 574 aa2.49□□□□□ -2.01
HRD3YLR207W PKP1P40530 394 aa2.49□□□□□ -2.01
HRD3YLR207W CTR1P49573 406 aa2.49□□□□□ -2.01
HRD3YLR207W NMA2P53204 395 aa2.49□□□□□ -2.01
HRD3YLR207W YGR111WP53265 400 aa2.49□□□□□ -2.01
HRD3YLR207W YNL144CP53907 740 aa2.49□□□□□ -2.01
HRD3YLR207W TRS23Q03784 219 aa2.49□□□□□ -2.01
HRD3YLR207W HEL2Q05580 639 aaKnown RBP2.49□□□□□ -2.01
HRD3YLR207W BUD7Q08754 746 aa2.49□□□□□ -2.01
HRD3YLR207W RPN5Q12250 445 aaKnown RBP2.49□□□□□ -2.01
HRD3YLR207W SEC39Q12745 709 aa2.49□□□□□ -2.01
HRD3YLR207W YPT6Q99260 215 aa2.49□□□□□ -2.01
HRD3YLR207W PMD1P32634 1753 aa2.49□□□□□ -2.01
HRD3YLR207W FLO11P08640 1367 aa2.49□□□□□ -2.01
HRD3YLR207W CHO2P05374 869 aaKnown RBP2.48□□□□□ -2.01
HRD3YLR207W SIR3P06701 978 aa2.48□□□□□ -2.01
HRD3YLR207W YPK1P12688 680 aaKnown RBP2.48□□□□□ -2.01
HRD3YLR207W RPL3P14126 387 aaKnown RBP2.48□□□□□ -2.01
HRD3YLR207W EST1P17214 699 aaPredicted RBP2.48□□□□□ -2.01
HRD3YLR207W PRP6P19735 899 aaPredicted RBP2.48□□□□□ -2.01
HRD3YLR207W VMA16P23968 213 aa2.48□□□□□ -2.01
HRD3YLR207W HCM1P25364 564 aa2.48□□□□□ -2.01
HRD3YLR207W YIH1P25637 258 aa2.48□□□□□ -2.01
HRD3YLR207W URK1P27515 501 aa2.48□□□□□ -2.01
HRD3YLR207W YJL206CP39529 758 aa2.48□□□□□ -2.01
HRD3YLR207W CAK1P43568 368 aaPredicted RBP2.48□□□□□ -2.01
HRD3YLR207W TCB2P48231 1178 aa2.48□□□□□ -2.01
HRD3YLR207W YIP4P53093 235 aa2.48□□□□□ -2.01
HRD3YLR207W MNP1P53163 194 aaPredicted RBP2.48□□□□□ -2.01
HRD3YLR207W FHN1P53279 174 aa2.48□□□□□ -2.01
HRD3YLR207W ATG4P53867 494 aa2.48□□□□□ -2.01
HRD3YLR207W GFD1Q04839 188 aaKnown RBP2.48□□□□□ -2.01
HRD3YLR207W CDA2Q06703 312 aa2.48□□□□□ -2.01
HRD3YLR207W DIB1Q06819 143 aaPredicted RBP2.48□□□□□ -2.01
HRD3YLR207W CRT10Q08226 957 aa2.48□□□□□ -2.01
HRD3YLR207W MLH3Q12083 715 aa2.48□□□□□ -2.01
HRD3YLR207W RKI1Q12189 258 aa2.48□□□□□ -2.01
HRD3YLR207W LAS17Q12446 633 aa2.48□□□□□ -2.01
HRD3YLR207W AVL9Q12500 764 aa2.48□□□□□ -2.01
HRD3YLR207W YMR084WA2P2R3 262 aa2.48□□□□□ -2.01
HRD3YLR207W RPL6BP05739 176 aaKnown RBP2.48□□□□□ -2.01
HRD3YLR207W PPR1P07272 904 aaPredicted RBP2.48□□□□□ -2.01
HRD3YLR207W SRV2P17555 526 aaKnown RBP2.48□□□□□ -2.01
HRD3YLR207W CLC1P17891 233 aa2.48□□□□□ -2.01
HRD3YLR207W SYN8P31377 255 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms