RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN1	YIR006C	RSA4	P25382	515 aa	Known RBP	4.63	□□□□□ -1.67
PAN1	YIR006C	PPZ1	P26570	692 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	ITR1	P30605	584 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	PIM1	P36775	1133 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	CDC27	P38042	758 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	DMA1	P38823	416 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	ACO2	P39533	789 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	DLD3	P39976	496 aa	Known RBP	4.63	□□□□□ -1.67
PAN1	YIR006C	RSM7	P47150	247 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	NUP49	Q02199	472 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	YPL107W	Q02873	248 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	YHC1	Q05900	231 aa	Known RBP	4.63	□□□□□ -1.67
PAN1	YIR006C	UBX5	Q06682	500 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	NUS1	Q12063	375 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	PKH2	Q12236	1081 aa	Known RBP	4.63	□□□□□ -1.67
PAN1	YIR006C	LDB19	Q12502	818 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	YGL041W-A	P0C5N3	154 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	BUB2	P26448	306 aa	Predicted RBP	4.63	□□□□□ -1.67
PAN1	YIR006C	PET127	P32606	800 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	YHR054C	P38780	354 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	YDR089W	P38966	869 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	JLP2	P40206	208 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	YIL166C	P40445	542 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	MET28	P40573	187 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	CHS6	P40955	746 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	CDC1	P40986	491 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	MEP2	P41948	499 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	YGR117C	P53270	476 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	YIG1	Q08956	461 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	IMA3	P0CW40	589 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	IMA4	P0CW41	589 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	LAT1	P12695	482 aa	Known RBP	4.63	□□□□□ -1.67
PAN1	YIR006C	TEC1	P18412	486 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	SGF29	P25554	259 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	MCM5	P29496	775 aa	Known RBP	4.63	□□□□□ -1.67
PAN1	YIR006C	RTT101	P47050	842 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	VPS25	P47142	202 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	YNL143C	P53908	130 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	IMA2	Q08295	589 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	TFB4	Q12004	338 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	SUS1	Q6WNK7	96 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	MED11	Q99278	115 aa		4.63	□□□□□ -1.67
PAN1	YIR006C	CPA1	P07258	411 aa	Known RBP	4.62	□□□□□ -1.67
PAN1	YIR006C	CMK2	P22517	447 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	IXR1	P33417	597 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	ERT1	P38140	529 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	MDM31	P38880	579 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	PIK1	P39104	1066 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	ALG8	P40351	577 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	BRE2	P43132	505 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	CCT8	P47079	568 aa	Known RBP	4.62	□□□□□ -1.67
PAN1	YIR006C	RSC9	Q03124	581 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	MAK3	Q03503	176 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	YDR239C	Q03780	787 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	HBT1	Q07653	1046 aa	Known RBP	4.62	□□□□□ -1.67
PAN1	YIR006C	AHA1	Q12449	350 aa	Known RBP	4.62	□□□□□ -1.67
PAN1	YIR006C	TY4B-P	A0A0B7P3V8	1104 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	MND2	P40577	368 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	IMA5	P40884	581 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	NET1	P47035	1189 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	JAC1	P53193	184 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	IBD2	P53892	351 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	COQ9	Q05779	260 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	GPM2	Q12008	311 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	GET4	Q12125	312 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	YDR061W	Q12298	539 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	HSP42	Q12329	375 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	PFK27	Q12471	397 aa	Predicted RBP	4.62	□□□□□ -1.67
PAN1	YIR006C	YDL007C-A	Q2V2Q0	85 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	FKS3	Q04952	1785 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	SIR3	P06701	978 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	PEP4	P07267	405 aa	Known RBP	4.62	□□□□□ -1.67
PAN1	YIR006C	SPE1	P08432	466 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	GLN1	P32288	370 aa	Known RBP	4.62	□□□□□ -1.67
PAN1	YIR006C	SKN1	P33336	771 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	TSC10	P38342	320 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	BIG1	P38813	335 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	PFK26	P40433	827 aa	Known RBP	4.62	□□□□□ -1.67
PAN1	YIR006C	DIE2	P50076	525 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	EFR3	Q03653	782 aa	Known RBP	4.62	□□□□□ -1.67
PAN1	YIR006C	SSL1	Q04673	461 aa	Predicted RBP	4.62	□□□□□ -1.67
PAN1	YIR006C	VID22	Q05934	901 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	YOR378W	Q08902	515 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	MST1	P07236	462 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	PET9	P18239	318 aa	Known RBP	4.62	□□□□□ -1.67
PAN1	YIR006C	PRP28	P23394	588 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	TKL2	P33315	681 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
PAN1	YIR006C	SIP4	P46954	829 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	MRK1	P50873	501 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	SLD3	P53135	668 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	YMR178W	Q03219	274 aa	Known RBP	4.62	□□□□□ -1.67
PAN1	YIR006C	ERB1	Q04660	807 aa	Known RBP	4.62	□□□□□ -1.67
PAN1	YIR006C	VPS74	Q06385	345 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	GUD1	Q07729	489 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	RBD2	Q12270	262 aa		4.62	□□□□□ -1.67
PAN1	YIR006C	DCP1	Q12517	231 aa	Predicted RBP	4.62	□□□□□ -1.67
PAN1	YIR006C	PMA2	P19657	947 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	ERG9	P29704	444 aa		4.61	□□□□□ -1.67
PAN1	YIR006C	DBP7	P36120	742 aa	Known RBP	4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms