RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C SKI8Q02793 397 aaPredicted RBP4.84□□□□□ -1.64
SEC9YGR009C SWP1Q02795 286 aa4.84□□□□□ -1.64
SEC9YGR009C MRP51Q02950 344 aa4.84□□□□□ -1.64
SEC9YGR009C GIS4Q04233 774 aa4.84□□□□□ -1.64
SEC9YGR009C TFC6Q06339 672 aa4.84□□□□□ -1.64
SEC9YGR009C FRA1Q07825 749 aa4.84□□□□□ -1.64
SEC9YGR009C YDR262WQ12331 272 aa4.84□□□□□ -1.64
SEC9YGR009C GPA2P10823 449 aa4.83□□□□□ -1.64
SEC9YGR009C EST1P17214 699 aaPredicted RBP4.83□□□□□ -1.64
SEC9YGR009C DBR1P24309 405 aaKnown RBP4.83□□□□□ -1.64
SEC9YGR009C YJU3P28321 313 aa4.83□□□□□ -1.64
SEC9YGR009C PEX3P28795 441 aa4.83□□□□□ -1.64
SEC9YGR009C HXT3P32466 567 aaKnown RBP4.83□□□□□ -1.64
SEC9YGR009C YOX1P34161 385 aa4.83□□□□□ -1.64
SEC9YGR009C NTH2P35172 780 aa4.83□□□□□ -1.64
SEC9YGR009C YKL070WP36087 169 aa4.83□□□□□ -1.64
SEC9YGR009C RFC5P38251 354 aa4.83□□□□□ -1.64
SEC9YGR009C ACO2P39533 789 aa4.83□□□□□ -1.64
SEC9YGR009C AIM2P39721 246 aa4.83□□□□□ -1.64
SEC9YGR009C FMC1P40491 155 aa4.83□□□□□ -1.64
SEC9YGR009C LYS14P40971 790 aa4.83□□□□□ -1.64
SEC9YGR009C TDA10P42938 290 aa4.83□□□□□ -1.64
SEC9YGR009C AGP3P43548 558 aa4.83□□□□□ -1.64
SEC9YGR009C PET130P47065 347 aa4.83□□□□□ -1.64
SEC9YGR009C PTK2P47116 818 aaKnown RBP4.83□□□□□ -1.64
SEC9YGR009C MSE1P48525 536 aa4.83□□□□□ -1.64
SEC9YGR009C CLA4P48562 842 aa4.83□□□□□ -1.64
SEC9YGR009C ACS2P52910 683 aaKnown RBP4.83□□□□□ -1.64
SEC9YGR009C PKP2P53170 491 aa4.83□□□□□ -1.64
SEC9YGR009C DRN1P53255 507 aaKnown RBP4.83□□□□□ -1.64
SEC9YGR009C VOA1P53262 265 aa4.83□□□□□ -1.64
SEC9YGR009C NOP13P53883 403 aaKnown RBP RIP-Chip data4.83□□□□□ -1.64not detected
SEC9YGR009C NGL2Q03264 515 aaKnown RBP4.83□□□□□ -1.64
SEC9YGR009C EFR3Q03653 782 aaKnown RBP4.83□□□□□ -1.64
SEC9YGR009C FAR8Q05040 523 aa4.83□□□□□ -1.64
SEC9YGR009C CSC1Q06538 782 aa4.83□□□□□ -1.64
SEC9YGR009C NUR1Q12066 484 aa4.83□□□□□ -1.64
SEC9YGR009C YOL159C-AQ3E769 90 aa4.83□□□□□ -1.64
SEC9YGR009C MSF1P08425 469 aa4.82□□□□□ -1.64
SEC9YGR009C RPL4AP10664 362 aaKnown RBP4.82□□□□□ -1.64
SEC9YGR009C NSP1P14907 823 aaKnown RBP4.82□□□□□ -1.64
SEC9YGR009C HPR1P17629 752 aaKnown RBP4.82□□□□□ -1.64
SEC9YGR009C PRE9P23638 258 aaKnown RBP4.82□□□□□ -1.64
SEC9YGR009C SAC6P32599 642 aaKnown RBP4.82□□□□□ -1.64
SEC9YGR009C SUI1P32911 108 aaKnown RBP4.82□□□□□ -1.64
SEC9YGR009C RPT3P33298 428 aaKnown RBP4.82□□□□□ -1.64
SEC9YGR009C DCW1P36091 449 aa4.82□□□□□ -1.64
SEC9YGR009C DDI1P40087 428 aa4.82□□□□□ -1.64
SEC9YGR009C RFC4P40339 323 aaKnown RBP4.82□□□□□ -1.64
SEC9YGR009C MRPS18P42847 217 aa4.82□□□□□ -1.64
SEC9YGR009C GZF3P42944 551 aaKnown RBP4.82□□□□□ -1.64
SEC9YGR009C YFH7P43591 353 aa4.82□□□□□ -1.64
SEC9YGR009C RTT101P47050 842 aa4.82□□□□□ -1.64
SEC9YGR009C RPL4BP49626 362 aaKnown RBP4.82□□□□□ -1.64
SEC9YGR009C IMD3P50095 523 aaKnown RBP4.82□□□□□ -1.64
SEC9YGR009C SLD3P53135 668 aa4.82□□□□□ -1.64
SEC9YGR009C ZPR1P53303 486 aaKnown RBP4.82□□□□□ -1.64
SEC9YGR009C VPS75P53853 264 aa4.82□□□□□ -1.64
SEC9YGR009C CWC27Q02770 301 aa4.82□□□□□ -1.64
SEC9YGR009C PRM15Q03262 622 aa4.82□□□□□ -1.64
SEC9YGR009C YMR210WQ03649 449 aa4.82□□□□□ -1.64
SEC9YGR009C HLR1Q04429 423 aa4.82□□□□□ -1.64
SEC9YGR009C CDA2Q06703 312 aa4.82□□□□□ -1.64
SEC9YGR009C PEX15Q08215 383 aa4.82□□□□□ -1.64
SEC9YGR009C GSH2Q08220 491 aa4.82□□□□□ -1.64
SEC9YGR009C CSM4Q08955 156 aa4.82□□□□□ -1.64
SEC9YGR009C YDL176WQ12027 708 aa4.82□□□□□ -1.64
SEC9YGR009C TAF10Q12030 206 aa4.82□□□□□ -1.64
SEC9YGR009C ATG9Q12142 997 aa4.82□□□□□ -1.64
SEC9YGR009C YOL107WQ12239 342 aa4.82□□□□□ -1.64
SEC9YGR009C NCA2Q12374 616 aa4.82□□□□□ -1.64
SEC9YGR009C WIP1Q2V2P8 89 aa4.82□□□□□ -1.64
SEC9YGR009C RPO41P13433 1351 aaKnown RBP4.82□□□□□ -1.64
SEC9YGR009C MHP1P43638 1398 aa4.82□□□□□ -1.64
SEC9YGR009C DST1P07273 309 aa4.82□□□□□ -1.64
SEC9YGR009C PDC5P16467 563 aaKnown RBP4.82□□□□□ -1.64
SEC9YGR009C SNF6P18888 332 aa4.82□□□□□ -1.64
SEC9YGR009C CKI1P20485 582 aa4.82□□□□□ -1.64
SEC9YGR009C CPR4P25334 318 aa4.82□□□□□ -1.64
SEC9YGR009C AGP1P25376 633 aa4.82□□□□□ -1.64
SEC9YGR009C GCG1P32656 232 aaKnown RBP4.82□□□□□ -1.64
SEC9YGR009C VPS21P36017 210 aaKnown RBP4.82□□□□□ -1.64
SEC9YGR009C POA1P38218 177 aa4.82□□□□□ -1.64
SEC9YGR009C CKB2P38930 258 aa4.82□□□□□ -1.64
SEC9YGR009C YAT2P40017 923 aa4.82□□□□□ -1.64
SEC9YGR009C PRM2P40534 656 aa4.82□□□□□ -1.64
SEC9YGR009C YGL176CP46945 554 aa4.82□□□□□ -1.64
SEC9YGR009C SIP4P46954 829 aa4.82□□□□□ -1.64
SEC9YGR009C IDS2P46958 469 aa4.82□□□□□ -1.64
SEC9YGR009C YGR066CP53242 292 aa4.82□□□□□ -1.64
SEC9YGR009C MRPL13Q02204 264 aa4.82□□□□□ -1.64
SEC9YGR009C YDR222WQ04925 415 aa4.82□□□□□ -1.64
SEC9YGR009C UBX3Q12229 455 aa4.82□□□□□ -1.64
SEC9YGR009C FYV7Q12247 151 aa4.82□□□□□ -1.64
SEC9YGR009C MCM16Q12262 181 aa4.82□□□□□ -1.64
SEC9YGR009C Q0144Q9ZZW2 109 aa4.82□□□□□ -1.64
SEC9YGR009C ARG4P04076 463 aaPredicted RBP4.81□□□□□ -1.64
SEC9YGR009C RPL25P04456 142 aaKnown RBP4.81□□□□□ -1.64
SEC9YGR009C RPP1AP05318 106 aaPredicted RBP4.81□□□□□ -1.64
SEC9YGR009C RAD1P06777 1100 aa4.81□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms