RNA–Protein interactions for RNA: YFR054C

YFR054C, Transcript of Dubious open reading frame, yeastyeast

Gene YFR054C, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFR054CYFR054C PAP1P29468 568 aaKnown RBP3.1□□□□□ -1.91
YFR054CYFR054C PEX2P32800 271 aa3.1□□□□□ -1.91
YFR054CYFR054C WBP1P33767 430 aaKnown RBP3.1□□□□□ -1.91
YFR054CYFR054C NUP133P36161 1157 aa3.1□□□□□ -1.91
YFR054CYFR054C RPL32P38061 130 aaKnown RBP3.1□□□□□ -1.91
YFR054CYFR054C SRP72P38688 640 aaKnown RBP3.1□□□□□ -1.91
YFR054CYFR054C SMF1P38925 575 aa3.1□□□□□ -1.91
YFR054CYFR054C CIN4P39110 191 aa3.1□□□□□ -1.91
YFR054CYFR054C SSU1P41930 458 aa3.1□□□□□ -1.91
YFR054CYFR054C VPS25P47142 202 aa3.1□□□□□ -1.91
YFR054CYFR054C JJJ1P53863 590 aa3.1□□□□□ -1.91
YFR054CYFR054C ECM22Q05958 814 aaPredicted RBP3.1□□□□□ -1.91
YFR054CYFR054C MCP2Q06567 569 aa3.1□□□□□ -1.91
YFR054CYFR054C YOL159CQ08300 171 aa3.1□□□□□ -1.91
YFR054CYFR054C ISA2Q12425 185 aa3.1□□□□□ -1.91
YFR054CYFR054C RRI1Q12468 440 aa3.1□□□□□ -1.91
YFR054CYFR054C SEC39Q12745 709 aa3.1□□□□□ -1.91
YFR054CYFR054C MRP13P12686 339 aa3.09□□□□□ -1.91
YFR054CYFR054C CNA1P23287 553 aa3.09□□□□□ -1.91
YFR054CYFR054C BUD5P25300 642 aaPredicted RBP3.09□□□□□ -1.91
YFR054CYFR054C RPC53P25441 422 aa3.09□□□□□ -1.91
YFR054CYFR054C GAC1P28006 793 aa3.09□□□□□ -1.91
YFR054CYFR054C VMA8P32610 256 aaKnown RBP3.09□□□□□ -1.91
YFR054CYFR054C MRE11P32829 692 aa3.09□□□□□ -1.91
YFR054CYFR054C PEX5P35056 612 aa3.09□□□□□ -1.91
YFR054CYFR054C SCO2P38072 301 aa3.09□□□□□ -1.91
YFR054CYFR054C ANS1P38832 159 aa3.09□□□□□ -1.91
YFR054CYFR054C LSM5P40089 93 aaKnown RBP3.09□□□□□ -1.91
YFR054CYFR054C HXT14P42833 540 aa3.09□□□□□ -1.91
YFR054CYFR054C APT1P49435 187 aaKnown RBP3.09□□□□□ -1.91
YFR054CYFR054C HOS2P53096 452 aaPredicted RBP3.09□□□□□ -1.91
YFR054CYFR054C VTC3Q02725 835 aa3.09□□□□□ -1.91
YFR054CYFR054C SEG1Q04279 960 aa3.09□□□□□ -1.91
YFR054CYFR054C RQC1Q05468 723 aaKnown RBP3.09□□□□□ -1.91
YFR054CYFR054C MRD1Q06106 887 aaKnown RBP3.09□□□□□ -1.91
YFR054CYFR054C ATG26Q06321 1198 aa3.09□□□□□ -1.91
YFR054CYFR054C FRE3Q08905 711 aa3.09□□□□□ -1.91
YFR054CYFR054C NDJ1Q12366 352 aa3.09□□□□□ -1.91
YFR054CYFR054C PGA3Q12746 312 aaKnown RBP3.09□□□□□ -1.91
YFR054CYFR054C SMC6Q12749 1114 aa3.09□□□□□ -1.91
YFR054CYFR054C YNL162W-AQ3E7A8 72 aa3.09□□□□□ -1.91
YFR054CYFR054C PUT2P07275 575 aa3.08□□□□□ -1.92
YFR054CYFR054C YMR085WP0CF18 432 aa3.08□□□□□ -1.92
YFR054CYFR054C CLC1P17891 233 aa3.08□□□□□ -1.92
YFR054CYFR054C MBR1P23493 339 aa3.08□□□□□ -1.92
YFR054CYFR054C PRD1P25375 712 aa3.08□□□□□ -1.92
YFR054CYFR054C CDC60P26637 1090 aaKnown RBP3.08□□□□□ -1.92
YFR054CYFR054C SYN8P31377 255 aa3.08□□□□□ -1.92
YFR054CYFR054C PMT1P33775 817 aa3.08□□□□□ -1.92
YFR054CYFR054C TIF3P34167 436 aaKnown RBP3.08□□□□□ -1.92
YFR054CYFR054C MSR1P38714 643 aa3.08□□□□□ -1.92
YFR054CYFR054C LYS20P48570 428 aaKnown RBP3.08□□□□□ -1.92
YFR054CYFR054C MNP1P53163 194 aaPredicted RBP3.08□□□□□ -1.92
YFR054CYFR054C YGR126WP53274 230 aa3.08□□□□□ -1.92
YFR054CYFR054C COP1P53622 1201 aaKnown RBP3.08□□□□□ -1.92
YFR054CYFR054C YNL234WP53857 426 aa3.08□□□□□ -1.92
YFR054CYFR054C DUG3P53871 357 aa3.08□□□□□ -1.92
YFR054CYFR054C ASI1P54074 624 aa3.08□□□□□ -1.92
YFR054CYFR054C RSM23Q01163 450 aa3.08□□□□□ -1.92
YFR054CYFR054C RSC9Q03124 581 aa3.08□□□□□ -1.92
YFR054CYFR054C CTL1Q03220 320 aaKnown RBP3.08□□□□□ -1.92
YFR054CYFR054C ARP10Q04549 284 aa3.08□□□□□ -1.92
YFR054CYFR054C RDR1Q08904 546 aa3.08□□□□□ -1.92
YFR054CYFR054C YRF1-4O13559 1382 aa3.08□□□□□ -1.92
YFR054CYFR054C YAP1P19880 650 aaKnown RBP3.07□□□□□ -1.92
YFR054CYFR054C SAS3P34218 831 aa3.07□□□□□ -1.92
YFR054CYFR054C BLI1P35727 113 aa3.07□□□□□ -1.92
YFR054CYFR054C YKL023WP36103 277 aaKnown RBP3.07□□□□□ -1.92
YFR054CYFR054C ROT2P38138 954 aa3.07□□□□□ -1.92
YFR054CYFR054C TOM71P38825 639 aaKnown RBP3.07□□□□□ -1.92
YFR054CYFR054C YJL068CP40363 299 aa3.07□□□□□ -1.92
YFR054CYFR054C ULP2P40537 1034 aaPredicted RBP3.07□□□□□ -1.92
YFR054CYFR054C CFD1P40558 293 aa3.07□□□□□ -1.92
YFR054CYFR054C SNM1P40993 198 aa3.07□□□□□ -1.92
YFR054CYFR054C ALK1P43633 760 aaKnown RBP3.07□□□□□ -1.92
YFR054CYFR054C STB2P46679 850 aa3.07□□□□□ -1.92
YFR054CYFR054C YPT11P48559 417 aa3.07□□□□□ -1.92
YFR054CYFR054C SGF73P53165 657 aa3.07□□□□□ -1.92
YFR054CYFR054C CAF130P53280 1122 aaPredicted RBP3.07□□□□□ -1.92
YFR054CYFR054C OGG1P53397 376 aaPredicted RBP3.07□□□□□ -1.92
YFR054CYFR054C TOF2Q02208 771 aa3.07□□□□□ -1.92
YFR054CYFR054C YVH1Q02256 364 aaKnown RBP3.07□□□□□ -1.92
YFR054CYFR054C RMT2Q03305 412 aa3.07□□□□□ -1.92
YFR054CYFR054C RIM13Q03792 727 aa3.07□□□□□ -1.92
YFR054CYFR054C YMR160WQ03823 816 aa3.07□□□□□ -1.92
YFR054CYFR054C SXM1Q04175 944 aaKnown RBP3.07□□□□□ -1.92
YFR054CYFR054C PDS5Q04264 1277 aa3.07□□□□□ -1.92
YFR054CYFR054C COQ11Q05892 277 aa3.07□□□□□ -1.92
YFR054CYFR054C VTA1Q06263 330 aa3.07□□□□□ -1.92
YFR054CYFR054C POS5Q06892 414 aa3.07□□□□□ -1.92
YFR054CYFR054C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
YFR054CYFR054C CRC1Q12289 327 aa3.07□□□□□ -1.92
YFR054CYFR054C FRE7Q12333 620 aa3.07□□□□□ -1.92
YFR054CYFR054C SNF3P10870 884 aa3.06□□□□□ -1.92
YFR054CYFR054C RPL3P14126 387 aaKnown RBP3.06□□□□□ -1.92
YFR054CYFR054C SEC66P33754 206 aa3.06□□□□□ -1.92
YFR054CYFR054C HCS1P34243 683 aa3.06□□□□□ -1.92
YFR054CYFR054C RKM3P38222 552 aa3.06□□□□□ -1.92
YFR054CYFR054C VPS41P38959 992 aa3.06□□□□□ -1.92
YFR054CYFR054C YIL024CP40543 189 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 115.3 ms