RNA–Protein interactions for RNA: YDR027C

VPS54, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS54, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS54YDR027C NUP192P47054 1683 aa1.64□□□□□ -2.15
VPS54YDR027C GLN3P18494 730 aa1.64□□□□□ -2.15
VPS54YDR027C STE50P25344 346 aa1.64□□□□□ -2.15
VPS54YDR027C ARP2P32381 391 aaKnown RBP1.64□□□□□ -2.15
VPS54YDR027C GCD7P32502 381 aaPredicted RBP1.64□□□□□ -2.15
VPS54YDR027C ADE17P38009 592 aaKnown RBP1.64□□□□□ -2.15
VPS54YDR027C AVT5P38176 459 aa1.64□□□□□ -2.15
VPS54YDR027C ERP2P39704 215 aa1.64□□□□□ -2.15
VPS54YDR027C SMK1P41808 388 aa1.64□□□□□ -2.15
VPS54YDR027C TAM41P53230 385 aa1.64□□□□□ -2.15
VPS54YDR027C ATG21Q02887 496 aa1.64□□□□□ -2.15
VPS54YDR027C MTG1Q03151 367 aaPredicted RBP1.64□□□□□ -2.15
VPS54YDR027C ADD37Q03233 198 aa1.64□□□□□ -2.15
VPS54YDR027C VID22Q05934 901 aa1.64□□□□□ -2.15
VPS54YDR027C COG4Q06096 861 aa1.64□□□□□ -2.15
VPS54YDR027C IWR1Q07532 353 aaPredicted RBP1.64□□□□□ -2.15
VPS54YDR027C TLG2Q08144 397 aa1.64□□□□□ -2.15
VPS54YDR027C YDR056CQ12025 205 aa1.64□□□□□ -2.15
VPS54YDR027C YOL087CQ99247 1116 aa1.64□□□□□ -2.15
VPS54YDR027C UTP20P35194 2493 aaKnown RBP1.64□□□□□ -2.15
VPS54YDR027C NUC1P08466 329 aa1.63□□□□□ -2.15
VPS54YDR027C PCT1P13259 424 aa1.63□□□□□ -2.15
VPS54YDR027C UBC1P21734 215 aaKnown RBP1.63□□□□□ -2.15
VPS54YDR027C STV1P37296 890 aa1.63□□□□□ -2.15
VPS54YDR027C PSF2P40359 213 aa1.63□□□□□ -2.15
VPS54YDR027C DPH1P40487 425 aaKnown RBP1.63□□□□□ -2.15
VPS54YDR027C MRPL13Q02204 264 aa1.63□□□□□ -2.15
VPS54YDR027C YMR178WQ03219 274 aaKnown RBP1.63□□□□□ -2.15
VPS54YDR027C YDR034W-BQ6Q5X2 51 aa1.63□□□□□ -2.15
VPS54YDR027C FMP27Q06179 2628 aa1.63□□□□□ -2.15
VPS54YDR027C SNF1P06782 633 aaKnown RBP1.63□□□□□ -2.15
VPS54YDR027C RFA2P26754 273 aaKnown RBP1.63□□□□□ -2.15
VPS54YDR027C SLC1P33333 303 aa1.63□□□□□ -2.15
VPS54YDR027C MRPL4P36517 319 aa1.63□□□□□ -2.15
VPS54YDR027C IMA1P53051 589 aa1.63□□□□□ -2.15
VPS54YDR027C ATG23Q06671 453 aa1.63□□□□□ -2.15
VPS54YDR027C MIS1P09440 975 aaKnown RBP1.63□□□□□ -2.15
VPS54YDR027C RPB8P20436 146 aa1.63□□□□□ -2.15
VPS54YDR027C TIF3P34167 436 aaKnown RBP1.63□□□□□ -2.15
VPS54YDR027C RRN3P36070 627 aa1.63□□□□□ -2.15
VPS54YDR027C MUD2P36084 527 aaKnown RBP1.63□□□□□ -2.15
VPS54YDR027C YJL068CP40363 299 aa1.63□□□□□ -2.15
VPS54YDR027C CTF18P49956 741 aa1.63□□□□□ -2.15
VPS54YDR027C DCP2P53550 970 aaKnown RBP1.63□□□□□ -2.15
VPS54YDR027C YMR018WQ04364 514 aa1.63□□□□□ -2.15
VPS54YDR027C STP3Q05937 343 aa1.63□□□□□ -2.15
VPS54YDR027C CSR1Q06705 408 aaKnown RBP1.63□□□□□ -2.15
VPS54YDR027C TRM8Q12009 286 aa1.63□□□□□ -2.15
VPS54YDR027C FAS2P19097 1887 aaKnown RBP1.62□□□□□ -2.15
VPS54YDR027C YLL066CQ99208 1374 aa1.62□□□□□ -2.15
VPS54YDR027C PET122P10355 254 aa1.62□□□□□ -2.15
VPS54YDR027C GFD2P25370 566 aaKnown RBP1.62□□□□□ -2.15
VPS54YDR027C CHS3P29465 1165 aa1.62□□□□□ -2.15
VPS54YDR027C XRS2P33301 854 aa1.62□□□□□ -2.15
VPS54YDR027C SWH1P35845 1188 aa1.62□□□□□ -2.15
VPS54YDR027C RFC1P38630 861 aaKnown RBP1.62□□□□□ -2.15
VPS54YDR027C MDM31P38880 579 aa1.62□□□□□ -2.15
VPS54YDR027C COX17Q12287 69 aa1.62□□□□□ -2.15
VPS54YDR027C SUL2Q12325 893 aa1.62□□□□□ -2.15
VPS54YDR027C RRI2Q12348 645 aa1.62□□□□□ -2.15
VPS54YDR027C YRF1-3P0CX14 1859 aa1.62□□□□□ -2.15
VPS54YDR027C YRF1-7P0CX15 1859 aa1.62□□□□□ -2.15
VPS54YDR027C YRF1-6P53819 1859 aa1.62□□□□□ -2.15
VPS54YDR027C RPN12P32496 274 aa1.62□□□□□ -2.15
VPS54YDR027C PAH1P32567 862 aa1.62□□□□□ -2.15
VPS54YDR027C UBP13P38187 747 aa1.62□□□□□ -2.15
VPS54YDR027C FSH1P38777 243 aaKnown RBP1.62□□□□□ -2.15
VPS54YDR027C RTS1P38903 757 aa1.62□□□□□ -2.15
VPS54YDR027C BUD16P39988 312 aa1.62□□□□□ -2.15
VPS54YDR027C DIM1P41819 318 aaKnown RBP1.62□□□□□ -2.15
VPS54YDR027C ZAP1P47043 880 aa1.62□□□□□ -2.15
VPS54YDR027C OPY2Q06810 360 aa1.62□□□□□ -2.15
VPS54YDR027C BUG1Q12191 341 aa1.62□□□□□ -2.15
VPS54YDR027C TY3B-IQ7LHG5 1498 aaKnown RBP1.62□□□□□ -2.15
VPS54YDR027C SEN1Q00416 2231 aaKnown RBP1.61□□□□□ -2.15
VPS54YDR027C RPL40AP0CH08 128 aaKnown RBP1.61□□□□□ -2.15
VPS54YDR027C RPL40BP0CH09 128 aaKnown RBP1.61□□□□□ -2.15
VPS54YDR027C BIK1P11709 440 aa1.61□□□□□ -2.15
VPS54YDR027C TKL1P23254 680 aaKnown RBP1.61□□□□□ -2.15
VPS54YDR027C LHS1P36016 881 aa1.61□□□□□ -2.15
VPS54YDR027C MIC60P36112 540 aa1.61□□□□□ -2.15
VPS54YDR027C YEL068CP39977 110 aa1.61□□□□□ -2.15
VPS54YDR027C ZDS2P54786 942 aa1.61□□□□□ -2.15
VPS54YDR027C SNO4Q04902 237 aa1.61□□□□□ -2.15
VPS54YDR027C SWA2Q06677 668 aa1.61□□□□□ -2.15
VPS54YDR027C HSP33Q08914 237 aaKnown RBP1.61□□□□□ -2.15
VPS54YDR027C HSP32Q08992 237 aa1.61□□□□□ -2.15
VPS54YDR027C TPK1P06244 397 aa1.61□□□□□ -2.15
VPS54YDR027C CHO1P08456 276 aa1.61□□□□□ -2.15
VPS54YDR027C AAC3P18238 307 aa1.61□□□□□ -2.15
VPS54YDR027C GID7P25569 745 aa1.61□□□□□ -2.15
VPS54YDR027C LRE1P25579 583 aaKnown RBP1.61□□□□□ -2.15
VPS54YDR027C RAD16P31244 790 aa1.61□□□□□ -2.15
VPS54YDR027C SAC1P32368 623 aaKnown RBP1.61□□□□□ -2.15
VPS54YDR027C TEF4P36008 412 aaKnown RBP1.61□□□□□ -2.15
VPS54YDR027C PCA1P38360 1216 aa1.61□□□□□ -2.15
VPS54YDR027C RRP3P38712 501 aaKnown RBP1.61□□□□□ -2.15
VPS54YDR027C SEC31P38968 1273 aaKnown RBP1.61□□□□□ -2.15
VPS54YDR027C YER010CP40011 234 aa1.61□□□□□ -2.15
VPS54YDR027C FMP10P40098 244 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms