RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C NUP133P36161 1157 aa3.5□□□□□ -1.85
RRP42YDL111C APD1P38281 316 aa3.5□□□□□ -1.85
RRP42YDL111C TSC10P38342 320 aa3.5□□□□□ -1.85
RRP42YDL111C MAF1P41910 395 aa3.5□□□□□ -1.85
RRP42YDL111C PTR3P43606 678 aa3.5□□□□□ -1.85
RRP42YDL111C DLD2P46681 530 aaKnown RBP3.5□□□□□ -1.85
RRP42YDL111C SAE2P46946 345 aa3.5□□□□□ -1.85
RRP42YDL111C NET1P47035 1189 aa3.5□□□□□ -1.85
RRP42YDL111C RPA49Q01080 415 aaPredicted RBP3.5□□□□□ -1.85
RRP42YDL111C YLR455WQ06188 304 aa3.5□□□□□ -1.85
RRP42YDL111C RTT109Q07794 436 aa3.5□□□□□ -1.85
RRP42YDL111C SGS1P35187 1447 aa3.5□□□□□ -1.85
RRP42YDL111C SEC3P33332 1336 aaKnown RBP3.49□□□□□ -1.85
RRP42YDL111C SPT7P35177 1332 aa3.49□□□□□ -1.85
RRP42YDL111C RAP1P11938 827 aa3.49□□□□□ -1.85
RRP42YDL111C MDH1P17505 334 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
RRP42YDL111C KGD1P20967 1014 aaKnown RBP3.49□□□□□ -1.85
RRP42YDL111C BOS1P25385 244 aa3.49□□□□□ -1.85
RRP42YDL111C BUD14P27637 709 aa3.49□□□□□ -1.85
RRP42YDL111C SAC1P32368 623 aaKnown RBP3.49□□□□□ -1.85
RRP42YDL111C TOA1P32773 286 aa3.49□□□□□ -1.85
RRP42YDL111C MDL1P33310 695 aa3.49□□□□□ -1.85
RRP42YDL111C YBL055CP34220 418 aaPredicted RBP3.49□□□□□ -1.85
RRP42YDL111C APE3P37302 537 aaKnown RBP3.49□□□□□ -1.85
RRP42YDL111C ICS2P38284 255 aa3.49□□□□□ -1.85
RRP42YDL111C FTH1P38310 465 aa3.49□□□□□ -1.85
RRP42YDL111C RFC1P38630 861 aaKnown RBP3.49□□□□□ -1.85
RRP42YDL111C XBP1P40489 647 aa3.49□□□□□ -1.85
RRP42YDL111C CDC1P40986 491 aa3.49□□□□□ -1.85
RRP42YDL111C STB2P46679 850 aa3.49□□□□□ -1.85
RRP42YDL111C YJL043WP47053 257 aa3.49□□□□□ -1.85
RRP42YDL111C HOS2P53096 452 aaPredicted RBP3.49□□□□□ -1.85
RRP42YDL111C ERG26P53199 349 aaKnown RBP3.49□□□□□ -1.85
RRP42YDL111C ART5P53244 586 aaKnown RBP3.49□□□□□ -1.85
RRP42YDL111C YPR003CP53394 754 aa3.49□□□□□ -1.85
RRP42YDL111C IPI3P53877 555 aa3.49□□□□□ -1.85
RRP42YDL111C BNI5P53890 448 aaKnown RBP3.49□□□□□ -1.85
RRP42YDL111C AIM32Q04689 311 aa3.49□□□□□ -1.85
RRP42YDL111C YLR049CQ12110 428 aa3.49□□□□□ -1.85
RRP42YDL111C MRP13P12686 339 aa3.48□□□□□ -1.85
RRP42YDL111C APE1P14904 514 aa3.48□□□□□ -1.85
RRP42YDL111C KRS1P15180 591 aaKnown RBP3.48□□□□□ -1.85
RRP42YDL111C CPR2P23285 205 aa3.48□□□□□ -1.85
RRP42YDL111C BUD5P25300 642 aaPredicted RBP3.48□□□□□ -1.85
RRP42YDL111C YUR1P26725 428 aa3.48□□□□□ -1.85
RRP42YDL111C URA7P28274 579 aaKnown RBP3.48□□□□□ -1.85
RRP42YDL111C MSS51P32335 436 aa3.48□□□□□ -1.85
RRP42YDL111C HCS1P34243 683 aa3.48□□□□□ -1.85
RRP42YDL111C YKL100CP34248 587 aa3.48□□□□□ -1.85
RRP42YDL111C MSR1P38714 643 aa3.48□□□□□ -1.85
RRP42YDL111C CAJ1P39101 391 aa3.48□□□□□ -1.85
RRP42YDL111C CIN4P39110 191 aa3.48□□□□□ -1.85
RRP42YDL111C TAX4P47030 604 aa3.48□□□□□ -1.85
RRP42YDL111C ORC5P50874 479 aa3.48□□□□□ -1.85
RRP42YDL111C SCS3P53012 380 aa3.48□□□□□ -1.85
RRP42YDL111C KAP120Q02932 1032 aa3.48□□□□□ -1.85
RRP42YDL111C SOV1Q04748 898 aa3.48□□□□□ -1.85
RRP42YDL111C ROY1Q04847 553 aa3.48□□□□□ -1.85
RRP42YDL111C TEN1Q07921 160 aa3.48□□□□□ -1.85
RRP42YDL111C CDC45Q08032 650 aa3.48□□□□□ -1.85
RRP42YDL111C YOR389WQ08912 624 aa3.48□□□□□ -1.85
RRP42YDL111C RGT2Q12300 763 aa3.48□□□□□ -1.85
RRP42YDL111C RDL1Q12305 139 aaKnown RBP3.48□□□□□ -1.85
RRP42YDL111C PDH1Q12428 516 aaKnown RBP3.48□□□□□ -1.85
RRP42YDL111C YDL007C-AQ2V2Q0 85 aa3.48□□□□□ -1.85
RRP42YDL111C ISN1Q99312 450 aa3.48□□□□□ -1.85
RRP42YDL111C CHO1P08456 276 aa3.47□□□□□ -1.85
RRP42YDL111C AQY1P0CD91 305 aa3.47□□□□□ -1.85
RRP42YDL111C NUP1P20676 1076 aa3.47□□□□□ -1.85
RRP42YDL111C TKL1P23254 680 aaKnown RBP3.47□□□□□ -1.85
RRP42YDL111C MBR1P23493 339 aa3.47□□□□□ -1.85
RRP42YDL111C MNE1P24720 663 aa3.47□□□□□ -1.85
RRP42YDL111C CLB2P24869 491 aa3.47□□□□□ -1.85
RRP42YDL111C SNT1P25357 1226 aa3.47□□□□□ -1.85
RRP42YDL111C PUP2P32379 260 aa3.47□□□□□ -1.85
RRP42YDL111C YME1P32795 747 aa3.47□□□□□ -1.85
RRP42YDL111C RPS0AP32905 252 aaKnown RBP3.47□□□□□ -1.85
RRP42YDL111C OCT1P35999 772 aa3.47□□□□□ -1.85
RRP42YDL111C MIA40P36046 403 aa3.47□□□□□ -1.85
RRP42YDL111C RXT2P38255 430 aa3.47□□□□□ -1.85
RRP42YDL111C DBP8P38719 431 aa3.47□□□□□ -1.85
RRP42YDL111C GDI1P39958 451 aaKnown RBP3.47□□□□□ -1.85
RRP42YDL111C ZIM17P42844 174 aa3.47□□□□□ -1.85
RRP42YDL111C YJL107CP42947 387 aa3.47□□□□□ -1.85
RRP42YDL111C CAK1P43568 368 aaPredicted RBP3.47□□□□□ -1.85
RRP42YDL111C YJL055WP47044 245 aa3.47□□□□□ -1.85
RRP42YDL111C MNP1P53163 194 aaPredicted RBP3.47□□□□□ -1.85
RRP42YDL111C YGR016WP53209 190 aa3.47□□□□□ -1.85
RRP42YDL111C PFA5Q03289 374 aa3.47□□□□□ -1.85
RRP42YDL111C ARX1Q03862 593 aaKnown RBP3.47□□□□□ -1.85
RRP42YDL111C RPC11Q04307 110 aaPredicted RBP3.47□□□□□ -1.85
RRP42YDL111C EMI2Q04409 500 aaKnown RBP3.47□□□□□ -1.85
RRP42YDL111C PAR32Q12515 295 aaKnown RBP3.47□□□□□ -1.85
RRP42YDL111C AFI1Q99222 893 aa3.47□□□□□ -1.85
RRP42YDL111C ARG81P05085 880 aa3.46□□□□□ -1.86
RRP42YDL111C TPM1P17536 199 aaKnown RBP3.46□□□□□ -1.86
RRP42YDL111C SUI2P20459 304 aaKnown RBP3.46□□□□□ -1.86
RRP42YDL111C HXT3P32466 567 aaKnown RBP3.46□□□□□ -1.86
RRP42YDL111C ANP1P32629 500 aa3.46□□□□□ -1.86
RRP42YDL111C TFB1P32776 642 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms