RNA–Protein interactions for RNA: YDL001W

RMD1, Transcript of Cytoplasmic protein required for sporulation, yeast

Gene RMD1, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RMD1	YDL001W	ADH7	P25377	361 aa		4.96	□□□□□ -1.62
RMD1	YDL001W	OCT1	P35999	772 aa		4.96	□□□□□ -1.62
RMD1	YDL001W	RGI2	P40188	164 aa		4.96	□□□□□ -1.62
RMD1	YDL001W	YEH1	Q07804	573 aa		4.96	□□□□□ -1.62
RMD1	YDL001W	GCN2	P15442	1659 aa		4.96	□□□□□ -1.62
RMD1	YDL001W	EST1	P17214	699 aa	Predicted RBP	4.95	□□□□□ -1.62
RMD1	YDL001W	COQ3	P27680	312 aa		4.95	□□□□□ -1.62
RMD1	YDL001W	YKL050C	P35736	922 aa		4.95	□□□□□ -1.62
RMD1	YDL001W	PXL1	P36166	706 aa		4.95	□□□□□ -1.62
RMD1	YDL001W	ARN1	P38731	627 aa		4.95	□□□□□ -1.62
RMD1	YDL001W	DOT5	P40553	215 aa		4.95	□□□□□ -1.62
RMD1	YDL001W	NMD5	P46970	1048 aa		4.95	□□□□□ -1.62
RMD1	YDL001W	SPC19	Q03954	165 aa		4.95	□□□□□ -1.62
RMD1	YDL001W	TAF11	Q04226	346 aa		4.95	□□□□□ -1.62
RMD1	YDL001W	DPB4	Q04603	196 aa	Known RBP	4.95	□□□□□ -1.62
RMD1	YDL001W	YLR287C	Q05881	355 aa		4.95	□□□□□ -1.62
RMD1	YDL001W	LUC7	Q07508	261 aa	Predicted RBP	4.95	□□□□□ -1.62
RMD1	YDL001W	BUD7	Q08754	746 aa		4.95	□□□□□ -1.62
RMD1	YDL001W	GET3	Q12154	354 aa	Known RBP	4.95	□□□□□ -1.62
RMD1	YDL001W	YPT6	Q99260	215 aa		4.95	□□□□□ -1.62
RMD1	YDL001W	RAD9	P14737	1309 aa		4.95	□□□□□ -1.62
RMD1	YDL001W	YRF1-2	P40105	1681 aa		4.94	□□□□□ -1.62
RMD1	YDL001W	FOB1	O13329	566 aa		4.94	□□□□□ -1.62
RMD1	YDL001W	MET17	P06106	444 aa		4.94	□□□□□ -1.62
RMD1	YDL001W	YMR085W	P0CF18	432 aa		4.94	□□□□□ -1.62
RMD1	YDL001W	CKA1	P15790	372 aa		4.94	□□□□□ -1.62
RMD1	YDL001W	FUR1	P18562	216 aa	Known RBP	4.94	□□□□□ -1.62
RMD1	YDL001W	MBR1	P23493	339 aa		4.94	□□□□□ -1.62
RMD1	YDL001W	SAC1	P32368	623 aa	Known RBP	4.94	□□□□□ -1.62
RMD1	YDL001W	UBP11	P36026	717 aa		4.94	□□□□□ -1.62
RMD1	YDL001W	SNU114	P36048	1008 aa	Known RBP	4.94	□□□□□ -1.62
RMD1	YDL001W	YJL107C	P42947	387 aa		4.94	□□□□□ -1.62
RMD1	YDL001W	SNO3	P43544	222 aa		4.94	□□□□□ -1.62
RMD1	YDL001W	SMC3	P47037	1230 aa		4.94	□□□□□ -1.62
RMD1	YDL001W	YTP1	P53584	459 aa		4.94	□□□□□ -1.62
RMD1	YDL001W	SYF1	Q04048	859 aa	Predicted RBP	4.94	□□□□□ -1.62
RMD1	YDL001W	FMP40	Q08968	688 aa	Predicted RBP	4.94	□□□□□ -1.62
RMD1	YDL001W	YPL272C	Q08984	517 aa		4.94	□□□□□ -1.62
RMD1	YDL001W	APL4	Q12028	832 aa		4.94	□□□□□ -1.62
RMD1	YDL001W	MF(ALPHA)1	P01149	165 aa		4.93	□□□□□ -1.62
RMD1	YDL001W	RED1	P14291	827 aa		4.93	□□□□□ -1.62
RMD1	YDL001W	CUE2	P36075	443 aa	Known RBP	4.93	□□□□□ -1.62
RMD1	YDL001W	ELO1	P39540	310 aa		4.93	□□□□□ -1.62
RMD1	YDL001W	TPA1	P40032	644 aa	Known RBP	4.93	□□□□□ -1.62
RMD1	YDL001W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
RMD1	YDL001W	SGM1	P47166	707 aa		4.93	□□□□□ -1.62
RMD1	YDL001W	VID30	P53076	958 aa		4.93	□□□□□ -1.62
RMD1	YDL001W	YGR066C	P53242	292 aa		4.93	□□□□□ -1.62
RMD1	YDL001W	IDP3	P53982	420 aa	Known RBP	4.93	□□□□□ -1.62
RMD1	YDL001W	LGE1	Q02796	332 aa	Known RBP	4.93	□□□□□ -1.62
RMD1	YDL001W	RSC9	Q03124	581 aa		4.93	□□□□□ -1.62
RMD1	YDL001W	YMR178W	Q03219	274 aa	Known RBP	4.93	□□□□□ -1.62
RMD1	YDL001W	LEU9	Q12166	604 aa	Known RBP	4.93	□□□□□ -1.62
RMD1	YDL001W	YJR112W-A	Q3E743	109 aa		4.93	□□□□□ -1.62
RMD1	YDL001W	RRP5	Q05022	1729 aa	Known RBP	4.92	□□□□□ -1.62
RMD1	YDL001W	PGK1	P00560	416 aa	Known RBP	4.92	□□□□□ -1.62
RMD1	YDL001W	KGD1	P20967	1014 aa	Known RBP	4.92	□□□□□ -1.62
RMD1	YDL001W	STE50	P25344	346 aa		4.92	□□□□□ -1.62
RMD1	YDL001W	CCT6	P39079	546 aa		4.92	□□□□□ -1.62
RMD1	YDL001W	VTC2	P43585	828 aa		4.92	□□□□□ -1.62
RMD1	YDL001W	PTR3	P43606	678 aa		4.92	□□□□□ -1.62
RMD1	YDL001W	IPI3	P53877	555 aa		4.92	□□□□□ -1.62
RMD1	YDL001W	YNL144C	P53907	740 aa		4.92	□□□□□ -1.62
RMD1	YDL001W	ERG13	P54839	491 aa	Known RBP	4.92	□□□□□ -1.62
RMD1	YDL001W	THI7	Q05998	598 aa		4.92	□□□□□ -1.62
RMD1	YDL001W	UTP21	Q06078	939 aa	Predicted RBP	4.92	□□□□□ -1.62
RMD1	YDL001W	PIG1	Q06216	648 aa		4.92	□□□□□ -1.62
RMD1	YDL001W	FRE3	Q08905	711 aa		4.92	□□□□□ -1.62
RMD1	YDL001W	RRI1	Q12468	440 aa		4.92	□□□□□ -1.62
RMD1	YDL001W	GAL4	P04386	881 aa		4.91	□□□□□ -1.62
RMD1	YDL001W	IMG1	P25626	169 aa		4.91	□□□□□ -1.62
RMD1	YDL001W	SSE2	P32590	693 aa	Known RBP	4.91	□□□□□ -1.62
RMD1	YDL001W	SEF1	P34228	1148 aa		4.91	□□□□□ -1.62
RMD1	YDL001W	RFC1	P38630	861 aa	Known RBP	4.91	□□□□□ -1.62
RMD1	YDL001W	DBP8	P38719	431 aa		4.91	□□□□□ -1.62
RMD1	YDL001W	ANS1	P38832	159 aa		4.91	□□□□□ -1.62
RMD1	YDL001W	YEL057C	P39983	233 aa		4.91	□□□□□ -1.62
RMD1	YDL001W	ATF1	P40353	525 aa		4.91	□□□□□ -1.62
RMD1	YDL001W	UBP8	P50102	471 aa		4.91	□□□□□ -1.62
RMD1	YDL001W	YGR127W	P53275	312 aa		4.91	□□□□□ -1.62
RMD1	YDL001W	RIM13	Q03792	727 aa		4.91	□□□□□ -1.62
RMD1	YDL001W	VPS38	Q05919	439 aa		4.91	□□□□□ -1.62
RMD1	YDL001W	ECM22	Q05958	814 aa	Predicted RBP	4.91	□□□□□ -1.62
RMD1	YDL001W	GRC3	Q07845	632 aa		4.91	□□□□□ -1.62
RMD1	YDL001W	TEN1	Q07921	160 aa		4.91	□□□□□ -1.62
RMD1	YDL001W	RRG1	Q12167	365 aa	Predicted RBP	4.91	□□□□□ -1.62
RMD1	YDL001W	SCM3	Q12334	223 aa		4.91	□□□□□ -1.62
RMD1	YDL001W	YNL162W-A	Q3E7A8	72 aa		4.91	□□□□□ -1.62
RMD1	YDL001W	NUP192	P47054	1683 aa		4.91	□□□□□ -1.62
RMD1	YDL001W	UTP9	P38882	575 aa	Known RBP	4.9	□□□□□ -1.63
RMD1	YDL001W	VRG4	P40107	337 aa		4.9	□□□□□ -1.63
RMD1	YDL001W	ALG5	P40350	334 aa		4.9	□□□□□ -1.63
RMD1	YDL001W	FAR3	P46671	204 aa		4.9	□□□□□ -1.63
RMD1	YDL001W	EFM6	P53970	246 aa		4.9	□□□□□ -1.63
RMD1	YDL001W	ASI1	P54074	624 aa		4.9	□□□□□ -1.63
RMD1	YDL001W	EMI2	Q04409	500 aa	Known RBP	4.9	□□□□□ -1.63
RMD1	YDL001W	SWF1	Q04629	336 aa		4.9	□□□□□ -1.63
RMD1	YDL001W	ECM30	Q06673	1274 aa		4.9	□□□□□ -1.63
RMD1	YDL001W	GAL80	P04387	435 aa		4.89	□□□□□ -1.63
RMD1	YDL001W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms