RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTG3	YBL103C	PDB1	P32473	366 aa	Known RBP	4.27	□□□□□ -1.73
RTG3	YBL103C	LOS1	P33418	1100 aa	Predicted RBP	4.27	□□□□□ -1.73
RTG3	YBL103C	SDS24	P38314	527 aa		4.27	□□□□□ -1.73
RTG3	YBL103C	YNG2	P38806	282 aa	Known RBP	4.27	□□□□□ -1.73
RTG3	YBL103C	MDM31	P38880	579 aa		4.27	□□□□□ -1.73
RTG3	YBL103C	DIA3	P52290	468 aa		4.27	□□□□□ -1.73
RTG3	YBL103C	RSM23	Q01163	450 aa		4.27	□□□□□ -1.73
RTG3	YBL103C	ECM30	Q06673	1274 aa		4.27	□□□□□ -1.73
RTG3	YBL103C	RPL15A	P05748	204 aa	Known RBP	4.26	□□□□□ -1.73
RTG3	YBL103C	SAM50	P53969	484 aa		4.26	□□□□□ -1.73
RTG3	YBL103C	ATG16	Q03818	150 aa		4.26	□□□□□ -1.73
RTG3	YBL103C	LAG1	P38703	411 aa		4.25	□□□□□ -1.73
RTG3	YBL103C	AAD10	P47182	288 aa		4.25	□□□□□ -1.73
RTG3	YBL103C	YGL082W	P53155	381 aa		4.25	□□□□□ -1.73
RTG3	YBL103C	ERG26	P53199	349 aa	Known RBP	4.25	□□□□□ -1.73
RTG3	YBL103C	YPL014W	Q02606	381 aa		4.25	□□□□□ -1.73
RTG3	YBL103C	YMR160W	Q03823	816 aa		4.25	□□□□□ -1.73
RTG3	YBL103C	YMR087W	Q04299	284 aa		4.25	□□□□□ -1.73
RTG3	YBL103C	HCR1	Q05775	265 aa	Known RBP	4.25	□□□□□ -1.73
RTG3	YBL103C	RTT109	Q07794	436 aa		4.25	□□□□□ -1.73
RTG3	YBL103C	RIX7	Q07844	837 aa	Known RBP	4.25	□□□□□ -1.73
RTG3	YBL103C	TEN1	Q07921	160 aa		4.25	□□□□□ -1.73
RTG3	YBL103C	LEU9	Q12166	604 aa	Known RBP	4.25	□□□□□ -1.73
RTG3	YBL103C	GDH1	P07262	454 aa	Known RBP	4.24	□□□□□ -1.73
RTG3	YBL103C	SEC62	P21825	274 aa		4.24	□□□□□ -1.73
RTG3	YBL103C	CMK1	P27466	446 aa	Known RBP	4.24	□□□□□ -1.73
RTG3	YBL103C	CBF2	P32504	956 aa		4.24	□□□□□ -1.73
RTG3	YBL103C	KAP123	P40069	1113 aa	Known RBP	4.24	□□□□□ -1.73
RTG3	YBL103C	RPM2	Q02773	1202 aa		4.24	□□□□□ -1.73
RTG3	YBL103C	ENT4	Q07872	247 aa		4.24	□□□□□ -1.73
RTG3	YBL103C	THI20	Q08224	551 aa		4.24	□□□□□ -1.73
RTG3	YBL103C	RSA1	Q08932	381 aa		4.24	□□□□□ -1.73
RTG3	YBL103C	NBP2	Q12163	236 aa		4.24	□□□□□ -1.73
RTG3	YBL103C	VMA16	P23968	213 aa		4.24	□□□□□ -1.73
RTG3	YBL103C	VPS17	P32913	551 aa		4.24	□□□□□ -1.73
RTG3	YBL103C	YDL186W	P48568	277 aa		4.24	□□□□□ -1.73
RTG3	YBL103C	LYS4	P49367	693 aa	Predicted RBP	4.24	□□□□□ -1.73
RTG3	YBL103C	SMM1	P53720	384 aa	Known RBP	4.24	□□□□□ -1.73
RTG3	YBL103C	YVH1	Q02256	364 aa	Known RBP	4.24	□□□□□ -1.73
RTG3	YBL103C	AGA1	P32323	725 aa		4.23	□□□□□ -1.73
RTG3	YBL103C	ECM15	P35195	104 aa		4.23	□□□□□ -1.73
RTG3	YBL103C	RPH1	P39956	796 aa		4.23	□□□□□ -1.73
RTG3	YBL103C	YFR016C	P43597	1233 aa	Known RBP	4.23	□□□□□ -1.73
RTG3	YBL103C	RTT101	P47050	842 aa		4.23	□□□□□ -1.73
RTG3	YBL103C	CBK1	P53894	756 aa		4.23	□□□□□ -1.73
RTG3	YBL103C	DPB4	Q04603	196 aa	Known RBP	4.23	□□□□□ -1.73
RTG3	YBL103C	SGV1	P23293	657 aa	Known RBP	4.22	□□□□□ -1.73
RTG3	YBL103C	ADH7	P25377	361 aa		4.22	□□□□□ -1.73
RTG3	YBL103C	NDC1	P32500	655 aa		4.22	□□□□□ -1.73
RTG3	YBL103C	SIP2	P34164	415 aa	Known RBP	4.22	□□□□□ -1.73
RTG3	YBL103C	MTR2	P34232	184 aa	Known RBP	4.22	□□□□□ -1.73
RTG3	YBL103C	YNK1	P36010	153 aa	Known RBP	4.22	□□□□□ -1.73
RTG3	YBL103C	YTA12	P40341	825 aa		4.22	□□□□□ -1.73
RTG3	YBL103C	RPR2	P40571	144 aa		4.22	□□□□□ -1.73
RTG3	YBL103C	VIP1	Q06685	1146 aa	Known RBP	4.22	□□□□□ -1.73
RTG3	YBL103C	CDC45	Q08032	650 aa		4.22	□□□□□ -1.73
RTG3	YBL103C	TLG2	Q08144	397 aa		4.22	□□□□□ -1.73
RTG3	YBL103C	SET6	Q12529	373 aa		4.22	□□□□□ -1.73
RTG3	YBL103C	SYN8	P31377	255 aa		4.21	□□□□□ -1.74
RTG3	YBL103C	YJL213W	P40896	331 aa		4.21	□□□□□ -1.74
RTG3	YBL103C	SIP4	P46954	829 aa		4.21	□□□□□ -1.74
RTG3	YBL103C	DUG3	P53871	357 aa		4.21	□□□□□ -1.74
RTG3	YBL103C	TCO89	Q08921	799 aa		4.21	□□□□□ -1.74
RTG3	YBL103C	MCK1	P21965	375 aa	Known RBP	4.2	□□□□□ -1.74
RTG3	YBL103C	SAN1	P22470	610 aa		4.2	□□□□□ -1.74
RTG3	YBL103C	PTR2	P32901	601 aa		4.2	□□□□□ -1.74
RTG3	YBL103C	RRN3	P36070	627 aa		4.2	□□□□□ -1.74
RTG3	YBL103C	AVT5	P38176	459 aa		4.2	□□□□□ -1.74
RTG3	YBL103C	COS10	P52924	374 aa		4.2	□□□□□ -1.74
RTG3	YBL103C	RAD30	Q04049	632 aa		4.2	□□□□□ -1.74
RTG3	YBL103C	MTF1	P14908	341 aa	Known RBP	4.19	□□□□□ -1.74
RTG3	YBL103C	KGD1	P20967	1014 aa	Known RBP	4.19	□□□□□ -1.74
RTG3	YBL103C	AGP2	P38090	596 aa		4.19	□□□□□ -1.74
RTG3	YBL103C	MAL33	P38157	468 aa		4.19	□□□□□ -1.74
RTG3	YBL103C	VPS52	P39904	641 aa		4.19	□□□□□ -1.74
RTG3	YBL103C	PTR3	P43606	678 aa		4.19	□□□□□ -1.74
RTG3	YBL103C	BOR1	P53838	576 aa		4.19	□□□□□ -1.74
RTG3	YBL103C	RHO4	Q00246	291 aa		4.19	□□□□□ -1.74
RTG3	YBL103C	ERP1	Q05359	219 aa	Known RBP	4.19	□□□□□ -1.74
RTG3	YBL103C	GLO2	Q05584	274 aa		4.19	□□□□□ -1.74
RTG3	YBL103C	CBS2	P14905	389 aa		4.18	□□□□□ -1.74
RTG3	YBL103C	YKL100C	P34248	587 aa		4.18	□□□□□ -1.74
RTG3	YBL103C	MTC4	P38335	694 aa	Known RBP	4.18	□□□□□ -1.74
RTG3	YBL103C	BUD5	P25300	642 aa	Predicted RBP	4.18	□□□□□ -1.74
RTG3	YBL103C	SPC110	P32380	944 aa		4.18	□□□□□ -1.74
RTG3	YBL103C	VPS24	P36095	224 aa	Known RBP	4.18	□□□□□ -1.74
RTG3	YBL103C	BUD32	P53323	261 aa		4.18	□□□□□ -1.74
RTG3	YBL103C	YML131W	Q03102	365 aa		4.18	□□□□□ -1.74
RTG3	YBL103C	VMS1	Q04311	632 aa	Known RBP	4.18	□□□□□ -1.74
RTG3	YBL103C	YLL056C	Q12177	298 aa		4.18	□□□□□ -1.74
RTG3	YBL103C	AYT1	Q12226	474 aa		4.18	□□□□□ -1.74
RTG3	YBL103C	FUM1	P08417	488 aa	Known RBP	4.17	□□□□□ -1.74
RTG3	YBL103C	APE1	P14904	514 aa		4.17	□□□□□ -1.74
RTG3	YBL103C	YBL055C	P34220	418 aa	Predicted RBP	4.17	□□□□□ -1.74
RTG3	YBL103C	CSM2	P40465	213 aa		4.17	□□□□□ -1.74
RTG3	YBL103C	ARC1	P46672	376 aa	Known RBP	4.17	□□□□□ -1.74
RTG3	YBL103C	EFM6	P53970	246 aa		4.17	□□□□□ -1.74
RTG3	YBL103C	RLI1	Q03195	608 aa	Known RBP	4.17	□□□□□ -1.74
RTG3	YBL103C	CDC24	P11433	854 aa	Predicted RBP	4.16	□□□□□ -1.74
RTG3	YBL103C	PUP3	P25451	205 aa	Known RBP	4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms