RNA–Protein interactions for RNA: YOR021C

SFM1, Transcript of SPOUT methyltransferase, yeast

Gene SFM1, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SFM1	YOR021C	RFC1	P38630	861 aa	Known RBP	3	□□□□□ -1.93
SFM1	YOR021C	NPR2	P39923	615 aa		3	□□□□□ -1.93
SFM1	YOR021C	YIL060W	P40519	144 aa		3	□□□□□ -1.93
SFM1	YOR021C	PKP1	P40530	394 aa		3	□□□□□ -1.93
SFM1	YOR021C	CFD1	P40558	293 aa		3	□□□□□ -1.93
SFM1	YOR021C	SGF73	P53165	657 aa		3	□□□□□ -1.93
SFM1	YOR021C	NUP53	Q03790	475 aa		3	□□□□□ -1.93
SFM1	YOR021C	MFB1	Q04922	465 aa		3	□□□□□ -1.93
SFM1	YOR021C	ARP9	Q05123	467 aa		3	□□□□□ -1.93
SFM1	YOR021C	ADE13	Q05911	482 aa	Known RBP	3	□□□□□ -1.93
SFM1	YOR021C	SDH5	Q08230	162 aa		3	□□□□□ -1.93
SFM1	YOR021C	RPS10A	Q08745	105 aa	Predicted RBP	3	□□□□□ -1.93
SFM1	YOR021C	YPT1	P01123	206 aa	Known RBP	2.99	□□□□□ -1.93
SFM1	YOR021C	SEC53	P07283	254 aa	Known RBP	2.99	□□□□□ -1.93
SFM1	YOR021C	VMA16	P23968	213 aa		2.99	□□□□□ -1.93
SFM1	YOR021C	PGS1	P25578	521 aa		2.99	□□□□□ -1.93
SFM1	YOR021C	SAC1	P32368	623 aa	Known RBP	2.99	□□□□□ -1.93
SFM1	YOR021C	SAC6	P32599	642 aa	Known RBP	2.99	□□□□□ -1.93
SFM1	YOR021C	SCO2	P38072	301 aa		2.99	□□□□□ -1.93
SFM1	YOR021C	SRO77	P38163	1010 aa		2.99	□□□□□ -1.93
SFM1	YOR021C	DIA4	P38705	446 aa	Predicted RBP	2.99	□□□□□ -1.93
SFM1	YOR021C	GND1	P38720	489 aa	Known RBP	2.99	□□□□□ -1.93
SFM1	YOR021C	YNG2	P38806	282 aa	Known RBP	2.99	□□□□□ -1.93
SFM1	YOR021C	CCT6	P39079	546 aa		2.99	□□□□□ -1.93
SFM1	YOR021C	ELO1	P39540	310 aa		2.99	□□□□□ -1.93
SFM1	YOR021C	ESL1	P40456	1118 aa		2.99	□□□□□ -1.93
SFM1	YOR021C	RPN11	P43588	306 aa	Known RBP	2.99	□□□□□ -1.93
SFM1	YOR021C	RPS10B	P46784	105 aa	Known RBP	2.99	□□□□□ -1.93
SFM1	YOR021C	DIA3	P52290	468 aa		2.99	□□□□□ -1.93
SFM1	YOR021C	IZH1	Q03419	316 aa		2.99	□□□□□ -1.93
SFM1	YOR021C	DPB4	Q04603	196 aa	Known RBP	2.99	□□□□□ -1.93
SFM1	YOR021C	NMD4	Q12129	218 aa		2.99	□□□□□ -1.93
SFM1	YOR021C	EST1	P17214	699 aa	Predicted RBP	2.98	□□□□□ -1.93
SFM1	YOR021C	CLB2	P24869	491 aa		2.98	□□□□□ -1.93
SFM1	YOR021C	YCP4	P25349	247 aa	Known RBP	2.98	□□□□□ -1.93
SFM1	YOR021C	TIF3	P34167	436 aa	Known RBP	2.98	□□□□□ -1.93
SFM1	YOR021C	UBP11	P36026	717 aa		2.98	□□□□□ -1.93
SFM1	YOR021C	LEU5	P38702	357 aa		2.98	□□□□□ -1.93
SFM1	YOR021C	FLC2	P39719	783 aa		2.98	□□□□□ -1.93
SFM1	YOR021C	AFG3	P39925	761 aa		2.98	□□□□□ -1.93
SFM1	YOR021C	UBP8	P50102	471 aa		2.98	□□□□□ -1.93
SFM1	YOR021C	PKP2	P53170	491 aa		2.98	□□□□□ -1.93
SFM1	YOR021C	RBG2	P53295	368 aa	Known RBP	2.98	□□□□□ -1.93
SFM1	YOR021C	VPS75	P53853	264 aa		2.98	□□□□□ -1.93
SFM1	YOR021C	ZDS2	P54786	942 aa		2.98	□□□□□ -1.93
SFM1	YOR021C	MDM1	Q01846	1127 aa		2.98	□□□□□ -1.93
SFM1	YOR021C	SWF1	Q04629	336 aa		2.98	□□□□□ -1.93
SFM1	YOR021C	LUC7	Q07508	261 aa	Predicted RBP	2.98	□□□□□ -1.93
SFM1	YOR021C	GRC3	Q07845	632 aa		2.98	□□□□□ -1.93
SFM1	YOR021C	TEN1	Q07921	160 aa		2.98	□□□□□ -1.93
SFM1	YOR021C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
SFM1	YOR021C	NOP58	Q12499	511 aa	Known RBP	2.98	□□□□□ -1.93
SFM1	YOR021C	SGS1	P35187	1447 aa		2.97	□□□□□ -1.93
SFM1	YOR021C	CBP1	P07252	654 aa		2.97	□□□□□ -1.93
SFM1	YOR021C	MRP13	P12686	339 aa		2.97	□□□□□ -1.93
SFM1	YOR021C	CBS1	P14066	229 aa		2.97	□□□□□ -1.93
SFM1	YOR021C	AIM17	P23180	465 aa	Known RBP	2.97	□□□□□ -1.93
SFM1	YOR021C	YIH1	P25637	258 aa		2.97	□□□□□ -1.93
SFM1	YOR021C	CMK1	P27466	446 aa	Known RBP	2.97	□□□□□ -1.93
SFM1	YOR021C	PEP3	P27801	918 aa		2.97	□□□□□ -1.93
SFM1	YOR021C	YMR124W	P39523	943 aa	Known RBP	2.97	□□□□□ -1.93
SFM1	YOR021C	UIP3	P39547	235 aa		2.97	□□□□□ -1.93
SFM1	YOR021C	VRG4	P40107	337 aa		2.97	□□□□□ -1.93
SFM1	YOR021C	VPS25	P47142	202 aa		2.97	□□□□□ -1.93
SFM1	YOR021C	LYS20	P48570	428 aa	Known RBP	2.97	□□□□□ -1.93
SFM1	YOR021C	HOS2	P53096	452 aa	Predicted RBP	2.97	□□□□□ -1.93
SFM1	YOR021C	YMR178W	Q03219	274 aa	Known RBP	2.97	□□□□□ -1.93
SFM1	YOR021C	CAC2	Q04199	468 aa		2.97	□□□□□ -1.93
SFM1	YOR021C	BUD22	Q04347	519 aa	Known RBP	2.97	□□□□□ -1.93
SFM1	YOR021C	BUD7	Q08754	746 aa		2.97	□□□□□ -1.93
SFM1	YOR021C	NDD1	Q08887	554 aa		2.97	□□□□□ -1.93
SFM1	YOR021C	CTI6	Q08923	506 aa		2.97	□□□□□ -1.93
SFM1	YOR021C	YPT6	Q99260	215 aa		2.97	□□□□□ -1.93
SFM1	YOR021C	EDE1	P34216	1381 aa		2.97	□□□□□ -1.93
SFM1	YOR021C	INH1	P01097	85 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	ARG3	P05150	338 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	HSC82	P15108	705 aa	Known RBP	2.96	□□□□□ -1.94
SFM1	YOR021C	MGM1	P32266	881 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	YKL050C	P35736	922 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	STV1	P37296	890 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	AGP2	P38090	596 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	TSC10	P38342	320 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	YEL057C	P39983	233 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	YAT2	P40017	923 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	RGI2	P40188	164 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	DOT5	P40553	215 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	IPI3	P53877	555 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	EFM6	P53970	246 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	RSM23	Q01163	450 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	EMI2	Q04409	500 aa	Known RBP	2.96	□□□□□ -1.94
SFM1	YOR021C	ATG26	Q06321	1198 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	ECM30	Q06673	1274 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	POS5	Q06892	414 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	SNA4	Q07549	140 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	YDL218W	Q07629	317 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	YEH1	Q07804	573 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	GSH2	Q08220	491 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	APL4	Q12028	832 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	RCN2	Q12044	265 aa		2.96	□□□□□ -1.94
SFM1	YOR021C	MF(ALPHA)1	P01149	165 aa		2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms