RNA–Protein interactions for RNA: YOL133W

HRT1, Transcript of RING-H2 domain core subunit of multiple ubiquitin ligase complexes, yeast

Gene HRT1, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT1	YOL133W	RPL42A	P0CX27	106 aa	Known RBP	4.89	□□□□□ -1.63
HRT1	YOL133W	RPL42B	P0CX28	106 aa	Known RBP	4.89	□□□□□ -1.63
HRT1	YOL133W	SGF29	P25554	259 aa		4.89	□□□□□ -1.63
HRT1	YOL133W	MGM1	P32266	881 aa		4.89	□□□□□ -1.63
HRT1	YOL133W	TSC10	P38342	320 aa		4.89	□□□□□ -1.63
HRT1	YOL133W	SPC97	P38863	823 aa		4.89	□□□□□ -1.63
HRT1	YOL133W	PHO90	P39535	881 aa		4.89	□□□□□ -1.63
HRT1	YOL133W	YIL060W	P40519	144 aa		4.89	□□□□□ -1.63
HRT1	YOL133W	MSC1	Q03104	513 aa		4.89	□□□□□ -1.63
HRT1	YOL133W	AFT2	Q08957	416 aa		4.89	□□□□□ -1.63
HRT1	YOL133W	PUP3	P25451	205 aa	Known RBP	4.88	□□□□□ -1.63
HRT1	YOL133W	POL4	P25615	582 aa		4.88	□□□□□ -1.63
HRT1	YOL133W	TMT1	P32643	299 aa		4.88	□□□□□ -1.63
HRT1	YOL133W	YKL050C	P35736	922 aa		4.88	□□□□□ -1.63
HRT1	YOL133W	UBA4	P38820	440 aa		4.88	□□□□□ -1.63
HRT1	YOL133W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
HRT1	YOL133W	NPR2	P39923	615 aa		4.88	□□□□□ -1.63
HRT1	YOL133W	PCL6	P40038	420 aa		4.88	□□□□□ -1.63
HRT1	YOL133W	MDV1	P47025	714 aa		4.88	□□□□□ -1.63
HRT1	YOL133W	MRX6	P48564	524 aa		4.88	□□□□□ -1.63
HRT1	YOL133W	SGF73	P53165	657 aa		4.88	□□□□□ -1.63
HRT1	YOL133W	PKP2	P53170	491 aa		4.88	□□□□□ -1.63
HRT1	YOL133W	SCW4	P53334	386 aa	Known RBP	4.88	□□□□□ -1.63
HRT1	YOL133W	ARP10	Q04549	284 aa		4.88	□□□□□ -1.63
HRT1	YOL133W	ATG26	Q06321	1198 aa		4.88	□□□□□ -1.63
HRT1	YOL133W	TCO89	Q08921	799 aa		4.88	□□□□□ -1.63
HRT1	YOL133W	ADH7	P25377	361 aa		4.87	□□□□□ -1.63
HRT1	YOL133W	RFC1	P38630	861 aa	Known RBP	4.87	□□□□□ -1.63
HRT1	YOL133W	DIA3	P52290	468 aa		4.87	□□□□□ -1.63
HRT1	YOL133W	DSD1	P53095	428 aa		4.87	□□□□□ -1.63
HRT1	YOL133W	NNF2	P53253	936 aa		4.87	□□□□□ -1.63
HRT1	YOL133W	ESBP6	P53918	673 aa		4.87	□□□□□ -1.63
HRT1	YOL133W	IZH1	Q03419	316 aa		4.87	□□□□□ -1.63
HRT1	YOL133W	MRPL1	Q04599	285 aa		4.87	□□□□□ -1.63
HRT1	YOL133W	MLH2	Q07980	695 aa		4.87	□□□□□ -1.63
HRT1	YOL133W	ICT1	Q12385	394 aa		4.87	□□□□□ -1.63
HRT1	YOL133W	ENT1	Q12518	454 aa		4.87	□□□□□ -1.63
HRT1	YOL133W	VMA16	P23968	213 aa		4.86	□□□□□ -1.63
HRT1	YOL133W	TIF3	P34167	436 aa	Known RBP	4.86	□□□□□ -1.63
HRT1	YOL133W	MTR2	P34232	184 aa	Known RBP	4.86	□□□□□ -1.63
HRT1	YOL133W	NUP133	P36161	1157 aa		4.86	□□□□□ -1.63
HRT1	YOL133W	NOP4	P37838	685 aa	Known RBP	4.86	□□□□□ -1.63
HRT1	YOL133W	AGP2	P38090	596 aa		4.86	□□□□□ -1.63
HRT1	YOL133W	YBR225W	P38321	900 aa		4.86	□□□□□ -1.63
HRT1	YOL133W	ANS1	P38832	159 aa		4.86	□□□□□ -1.63
HRT1	YOL133W	RGI2	P40188	164 aa		4.86	□□□□□ -1.63
HRT1	YOL133W	VPS25	P47142	202 aa		4.86	□□□□□ -1.63
HRT1	YOL133W	PYK2	P52489	506 aa	Known RBP	4.86	□□□□□ -1.63
HRT1	YOL133W	LCL3	P53153	274 aa		4.86	□□□□□ -1.63
HRT1	YOL133W	VPS75	P53853	264 aa		4.86	□□□□□ -1.63
HRT1	YOL133W	YML037C	Q03703	340 aa		4.86	□□□□□ -1.63
HRT1	YOL133W	YEH1	Q07804	573 aa		4.86	□□□□□ -1.63
HRT1	YOL133W	UBX3	Q12229	455 aa		4.86	□□□□□ -1.63
HRT1	YOL133W	PUT2	P07275	575 aa		4.85	□□□□□ -1.63
HRT1	YOL133W	PRE8	P23639	250 aa		4.85	□□□□□ -1.63
HRT1	YOL133W	ATO2	P32907	282 aa		4.85	□□□□□ -1.63
HRT1	YOL133W	YBL029W	P38201	376 aa		4.85	□□□□□ -1.63
HRT1	YOL133W	EFM2	P38347	419 aa		4.85	□□□□□ -1.63
HRT1	YOL133W	ESL1	P40456	1118 aa		4.85	□□□□□ -1.63
HRT1	YOL133W	IRC8	P47046	822 aa		4.85	□□□□□ -1.63
HRT1	YOL133W	GLO1	P50107	326 aa		4.85	□□□□□ -1.63
HRT1	YOL133W	TIM10	P87108	93 aa		4.85	□□□□□ -1.63
HRT1	YOL133W	ECI1	Q05871	280 aa		4.85	□□□□□ -1.63
HRT1	YOL133W	UTP21	Q06078	939 aa	Predicted RBP	4.85	□□□□□ -1.63
HRT1	YOL133W	MCP2	Q06567	569 aa		4.85	□□□□□ -1.63
HRT1	YOL133W	LUC7	Q07508	261 aa	Predicted RBP	4.85	□□□□□ -1.63
HRT1	YOL133W	GRC3	Q07845	632 aa		4.85	□□□□□ -1.63
HRT1	YOL133W	APL4	Q12028	832 aa		4.85	□□□□□ -1.63
HRT1	YOL133W	LEU9	Q12166	604 aa	Known RBP	4.85	□□□□□ -1.63
HRT1	YOL133W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
HRT1	YOL133W	YPT6	Q99260	215 aa		4.85	□□□□□ -1.63
HRT1	YOL133W	EDE1	P34216	1381 aa		4.85	□□□□□ -1.63
HRT1	YOL133W	SGV1	P23293	657 aa	Known RBP	4.84	□□□□□ -1.63
HRT1	YOL133W	YIH1	P25637	258 aa		4.84	□□□□□ -1.63
HRT1	YOL133W	SSE2	P32590	693 aa	Known RBP	4.84	□□□□□ -1.63
HRT1	YOL133W	ERG26	P53199	349 aa	Known RBP	4.84	□□□□□ -1.63
HRT1	YOL133W	NUP100	Q02629	959 aa		4.84	□□□□□ -1.63
HRT1	YOL133W	EKI1	Q03764	534 aa		4.84	□□□□□ -1.63
HRT1	YOL133W	COG4	Q06096	861 aa		4.84	□□□□□ -1.63
HRT1	YOL133W	ETT1	Q08421	412 aa	Known RBP	4.84	□□□□□ -1.63
HRT1	YOL133W	CTI6	Q08923	506 aa		4.84	□□□□□ -1.63
HRT1	YOL133W	APL5	Q08951	932 aa	Known RBP	4.84	□□□□□ -1.63
HRT1	YOL133W	HUA2	Q12134	243 aa		4.84	□□□□□ -1.63
HRT1	YOL133W	MF(ALPHA)1	P01149	165 aa		4.83	□□□□□ -1.64
HRT1	YOL133W	CBP1	P07252	654 aa		4.83	□□□□□ -1.64
HRT1	YOL133W	LCB1	P25045	558 aa	Known RBP	4.83	□□□□□ -1.64
HRT1	YOL133W	BUD5	P25300	642 aa	Predicted RBP	4.83	□□□□□ -1.64
HRT1	YOL133W	ELO2	P25358	347 aa		4.83	□□□□□ -1.64
HRT1	YOL133W	YBL055C	P34220	418 aa	Predicted RBP	4.83	□□□□□ -1.64
HRT1	YOL133W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
HRT1	YOL133W	FET5	P43561	622 aa		4.83	□□□□□ -1.64
HRT1	YOL133W	HOS2	P53096	452 aa	Predicted RBP	4.83	□□□□□ -1.64
HRT1	YOL133W	VPS72	Q03388	795 aa		4.83	□□□□□ -1.64
HRT1	YOL133W	EMI2	Q04409	500 aa	Known RBP	4.83	□□□□□ -1.64
HRT1	YOL133W	DPB4	Q04603	196 aa	Known RBP	4.83	□□□□□ -1.64
HRT1	YOL133W	TEN1	Q07921	160 aa		4.83	□□□□□ -1.64
HRT1	YOL133W	NCE102	Q12207	173 aa	RIP-Chip data	4.83	□□□□□ -1.64	not detected
HRT1	YOL133W	SEC53	P07283	254 aa	Known RBP	4.82	□□□□□ -1.64
HRT1	YOL133W	MRP13	P12686	339 aa		4.82	□□□□□ -1.64
HRT1	YOL133W	PMS1	P14242	873 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms