RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeastyeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT1YNR001C LUC7Q07508 261 aaPredicted RBP3.9□□□□□ -1.78
CIT1YNR001C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.9□□□□□ -1.78not detected
CIT1YNR001C RUD3Q12234 484 aaKnown RBP3.9□□□□□ -1.78
CIT1YNR001C GPR1Q12361 961 aa3.9□□□□□ -1.78
CIT1YNR001C YJR112W-AQ3E743 109 aa3.9□□□□□ -1.78
CIT1YNR001C YOL159C-AQ3E769 90 aa3.9□□□□□ -1.78
CIT1YNR001C NCB2Q92317 146 aa3.9□□□□□ -1.78
CIT1YNR001C AFI1Q99222 893 aa3.9□□□□□ -1.78
CIT1YNR001C ECM3Q99252 613 aa3.9□□□□□ -1.78
CIT1YNR001C SWI1P09547 1314 aa3.9□□□□□ -1.79
CIT1YNR001C LYS2P07702 1392 aa3.9□□□□□ -1.79
CIT1YNR001C PPR1P07272 904 aaPredicted RBP3.89□□□□□ -1.79
CIT1YNR001C ALG7P07286 448 aa3.89□□□□□ -1.79
CIT1YNR001C THR1P17423 357 aaKnown RBP3.89□□□□□ -1.79
CIT1YNR001C SRP54P20424 541 aaKnown RBP3.89□□□□□ -1.79
CIT1YNR001C PRP28P23394 588 aa3.89□□□□□ -1.79
CIT1YNR001C SPB1P25582 841 aaPredicted RBP3.89□□□□□ -1.79
CIT1YNR001C CAP1P28495 268 aaKnown RBP3.89□□□□□ -1.79
CIT1YNR001C UIP5P36137 443 aa3.89□□□□□ -1.79
CIT1YNR001C YHR218WP38899 603 aa3.89□□□□□ -1.79
CIT1YNR001C YEL057CP39983 233 aa3.89□□□□□ -1.79
CIT1YNR001C SLZ1P40167 298 aa3.89□□□□□ -1.79
CIT1YNR001C ATF1P40353 525 aa3.89□□□□□ -1.79
CIT1YNR001C MDE1P47095 244 aa3.89□□□□□ -1.79
CIT1YNR001C BNI5P53890 448 aaKnown RBP3.89□□□□□ -1.79
CIT1YNR001C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
CIT1YNR001C EFR3Q03653 782 aaKnown RBP3.89□□□□□ -1.79
CIT1YNR001C YDR239CQ03780 787 aa3.89□□□□□ -1.79
CIT1YNR001C NKP2Q06162 153 aa3.89□□□□□ -1.79
CIT1YNR001C YLR456WQ06199 204 aa3.89□□□□□ -1.79
CIT1YNR001C RIX7Q07844 837 aaKnown RBP3.89□□□□□ -1.79
CIT1YNR001C MLH2Q07980 695 aa3.89□□□□□ -1.79
CIT1YNR001C SPE3Q12074 293 aaKnown RBP3.89□□□□□ -1.79
CIT1YNR001C SWT1Q12104 458 aa3.89□□□□□ -1.79
CIT1YNR001C GPM3Q12326 303 aa3.89□□□□□ -1.79
CIT1YNR001C SKS1Q12505 502 aa3.89□□□□□ -1.79
CIT1YNR001C CTF3Q12748 733 aa3.89□□□□□ -1.79
CIT1YNR001C PNO1Q99216 274 aaKnown RBP3.89□□□□□ -1.79
CIT1YNR001C ROM2P51862 1356 aaKnown RBP3.89□□□□□ -1.79
CIT1YNR001C KAR3P17119 729 aa3.88□□□□□ -1.79
CIT1YNR001C CPR2P23285 205 aa3.88□□□□□ -1.79
CIT1YNR001C PHO84P25297 587 aaKnown RBP3.88□□□□□ -1.79
CIT1YNR001C PRE2P30656 287 aaKnown RBP3.88□□□□□ -1.79
CIT1YNR001C AGP2P38090 596 aa3.88□□□□□ -1.79
CIT1YNR001C UBP13P38187 747 aa3.88□□□□□ -1.79
CIT1YNR001C EHT1P38295 451 aa3.88□□□□□ -1.79
CIT1YNR001C SIC1P38634 284 aa3.88□□□□□ -1.79
CIT1YNR001C YHR054CP38780 354 aa3.88□□□□□ -1.79
CIT1YNR001C YJL193WP39542 402 aa3.88□□□□□ -1.79
CIT1YNR001C NDC80P40460 691 aa3.88□□□□□ -1.79
CIT1YNR001C MET28P40573 187 aa3.88□□□□□ -1.79
CIT1YNR001C QRI1P43123 477 aaKnown RBP3.88□□□□□ -1.79
CIT1YNR001C NOP9P47077 666 aaKnown RBP3.88□□□□□ -1.79
CIT1YNR001C LCL3P53153 274 aa3.88□□□□□ -1.79
CIT1YNR001C ARP5P53946 755 aa3.88□□□□□ -1.79
CIT1YNR001C YNL058CP53947 316 aa3.88□□□□□ -1.79
CIT1YNR001C NRG1Q03125 231 aa3.88□□□□□ -1.79
CIT1YNR001C NGL2Q03264 515 aaKnown RBP3.88□□□□□ -1.79
CIT1YNR001C TLG1Q03322 224 aa3.88□□□□□ -1.79
CIT1YNR001C YML037CQ03703 340 aa3.88□□□□□ -1.79
CIT1YNR001C BUD22Q04347 519 aaKnown RBP3.88□□□□□ -1.79
CIT1YNR001C VPS38Q05919 439 aa3.88□□□□□ -1.79
CIT1YNR001C YEH1Q07804 573 aa3.88□□□□□ -1.79
CIT1YNR001C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
CIT1YNR001C KEL3Q08979 651 aaPredicted RBP3.88□□□□□ -1.79
CIT1YNR001C VCX1Q99385 411 aa3.88□□□□□ -1.79
CIT1YNR001C SEC7P11075 2009 aaKnown RBP3.88□□□□□ -1.79
CIT1YNR001C PSK1P31374 1356 aa3.87□□□□□ -1.79
CIT1YNR001C YMR084WA2P2R3 262 aa3.87□□□□□ -1.79
CIT1YNR001C CET1O13297 549 aaPredicted RBP3.87□□□□□ -1.79
CIT1YNR001C YBR085C-AO43137 85 aa3.87□□□□□ -1.79
CIT1YNR001C APE1P14904 514 aa3.87□□□□□ -1.79
CIT1YNR001C TUP1P16649 713 aa3.87□□□□□ -1.79
CIT1YNR001C VPS33P20795 691 aa3.87□□□□□ -1.79
CIT1YNR001C SSE1P32589 693 aaKnown RBP3.87□□□□□ -1.79
CIT1YNR001C GYP6P32806 458 aa3.87□□□□□ -1.79
CIT1YNR001C YPT7P32939 208 aa3.87□□□□□ -1.79
CIT1YNR001C DAD2P36162 133 aa3.87□□□□□ -1.79
CIT1YNR001C CST26P38226 397 aa3.87□□□□□ -1.79
CIT1YNR001C COS111P38308 924 aa3.87□□□□□ -1.79
CIT1YNR001C LNP1P38878 278 aa3.87□□□□□ -1.79
CIT1YNR001C EFM4P40516 257 aa3.87□□□□□ -1.79
CIT1YNR001C IME4P41833 600 aa3.87□□□□□ -1.79
CIT1YNR001C YDL183CP48569 320 aa3.87□□□□□ -1.79
CIT1YNR001C YNL050CP53952 270 aa3.87□□□□□ -1.79
CIT1YNR001C FDC1Q03034 503 aa3.87□□□□□ -1.79
CIT1YNR001C VPS20Q04272 221 aa3.87□□□□□ -1.79
CIT1YNR001C ROY1Q04847 553 aa3.87□□□□□ -1.79
CIT1YNR001C CRF1Q04930 467 aa3.87□□□□□ -1.79
CIT1YNR001C HOF1Q05080 669 aa3.87□□□□□ -1.79
CIT1YNR001C STP3Q05937 343 aa3.87□□□□□ -1.79
CIT1YNR001C FMP45Q07651 309 aa3.87□□□□□ -1.79
CIT1YNR001C ATG29Q12092 213 aa3.87□□□□□ -1.79
CIT1YNR001C RPL6BP05739 176 aaKnown RBP3.87□□□□□ -1.79
CIT1YNR001C LOT5P34234 306 aa3.87□□□□□ -1.79
CIT1YNR001C PPS1P38148 807 aa3.87□□□□□ -1.79
CIT1YNR001C WSS1P38838 269 aa3.87□□□□□ -1.79
CIT1YNR001C MTG2P38860 518 aa3.87□□□□□ -1.79
CIT1YNR001C YMR124WP39523 943 aaKnown RBP3.87□□□□□ -1.79
CIT1YNR001C YIL077CP40508 320 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms