RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C ECM18Q04623 453 aa3.15□□□□□ -1.91
SSN8YNL025C HOF1Q05080 669 aa3.15□□□□□ -1.91
SSN8YNL025C YLR455WQ06188 304 aa3.15□□□□□ -1.91
SSN8YNL025C VTA1Q06263 330 aa3.15□□□□□ -1.91
SSN8YNL025C ARO10Q06408 635 aa3.15□□□□□ -1.91
SSN8YNL025C RRT8Q08219 342 aa3.15□□□□□ -1.91
SSN8YNL025C TCO89Q08921 799 aa3.15□□□□□ -1.91
SSN8YNL025C DIN7Q12086 430 aa3.15□□□□□ -1.91
SSN8YNL025C RTK1Q12100 620 aaPredicted RBP3.15□□□□□ -1.91
SSN8YNL025C MED4Q12343 284 aa3.15□□□□□ -1.91
SSN8YNL025C GPR1Q12361 961 aa3.15□□□□□ -1.91
SSN8YNL025C YOL159C-AQ3E769 90 aa3.15□□□□□ -1.91
SSN8YNL025C TFB5Q3E7C1 72 aaPredicted RBP3.15□□□□□ -1.91
SSN8YNL025C YLR278CQ05854 1341 aa3.15□□□□□ -1.91
SSN8YNL025C BNR1P40450 1375 aa3.14□□□□□ -1.91
SSN8YNL025C TDH1P00360 332 aaKnown RBP3.14□□□□□ -1.91
SSN8YNL025C SIR3P06701 978 aa3.14□□□□□ -1.91
SSN8YNL025C EST1P17214 699 aaPredicted RBP3.14□□□□□ -1.91
SSN8YNL025C ADE2P21264 571 aaKnown RBP3.14□□□□□ -1.91
SSN8YNL025C BOS1P25385 244 aa3.14□□□□□ -1.91
SSN8YNL025C YCL002CP25565 263 aa3.14□□□□□ -1.91
SSN8YNL025C CAP1P28495 268 aaKnown RBP3.14□□□□□ -1.91
SSN8YNL025C ARP2P32381 391 aaKnown RBP3.14□□□□□ -1.91
SSN8YNL025C KRE6P32486 720 aa3.14□□□□□ -1.91
SSN8YNL025C FRD1P32614 470 aaKnown RBP3.14□□□□□ -1.91
SSN8YNL025C CBF5P33322 483 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
SSN8YNL025C SEF1P34228 1148 aa3.14□□□□□ -1.91
SSN8YNL025C AKL1P38080 1108 aaKnown RBP3.14□□□□□ -1.91
SSN8YNL025C CDS1P38221 457 aa3.14□□□□□ -1.91
SSN8YNL025C PEX32P38292 413 aa3.14□□□□□ -1.91
SSN8YNL025C MUP3P38734 546 aa3.14□□□□□ -1.91
SSN8YNL025C PET100P38958 111 aa3.14□□□□□ -1.91
SSN8YNL025C PSD1P39006 500 aa3.14□□□□□ -1.91
SSN8YNL025C AIM20P40451 204 aa3.14□□□□□ -1.91
SSN8YNL025C EMC2P47133 292 aaKnown RBP3.14□□□□□ -1.91
SSN8YNL025C TCB2P48231 1178 aa3.14□□□□□ -1.91
SSN8YNL025C LYS4P49367 693 aaPredicted RBP3.14□□□□□ -1.91
SSN8YNL025C ASE1P50275 885 aa3.14□□□□□ -1.91
SSN8YNL025C ALT2P52892 507 aa3.14□□□□□ -1.91
SSN8YNL025C YBP2P53169 641 aa3.14□□□□□ -1.91
SSN8YNL025C PEF1P53238 335 aa3.14□□□□□ -1.91
SSN8YNL025C CSL4P53859 292 aaPredicted RBP3.14□□□□□ -1.91
SSN8YNL025C AQR1P53943 586 aa3.14□□□□□ -1.91
SSN8YNL025C SMA1Q02651 245 aa3.14□□□□□ -1.91
SSN8YNL025C YPL108WQ02872 168 aaPredicted RBP3.14□□□□□ -1.91
SSN8YNL025C VPS64Q03944 604 aa3.14□□□□□ -1.91
SSN8YNL025C PPN1Q04119 674 aa3.14□□□□□ -1.91
SSN8YNL025C RRB1Q04225 511 aaKnown RBP3.14□□□□□ -1.91
SSN8YNL025C RQC1Q05468 723 aaKnown RBP3.14□□□□□ -1.91
SSN8YNL025C YEH1Q07804 573 aa3.14□□□□□ -1.91
SSN8YNL025C ENT4Q07872 247 aa3.14□□□□□ -1.91
SSN8YNL025C ATG29Q12092 213 aa3.14□□□□□ -1.91
SSN8YNL025C TAF3Q12297 353 aa3.14□□□□□ -1.91
SSN8YNL025C STE2D6VTK4 431 aa3.13□□□□□ -1.91
SSN8YNL025C ATP2P00830 511 aaKnown RBP3.13□□□□□ -1.91
SSN8YNL025C CBP2P03874 630 aaPredicted RBP3.13□□□□□ -1.91
SSN8YNL025C BUD5P25300 642 aaPredicted RBP3.13□□□□□ -1.91
SSN8YNL025C SWI4P25302 1093 aaKnown RBP3.13□□□□□ -1.91
SSN8YNL025C ADY2P25613 283 aa3.13□□□□□ -1.91
SSN8YNL025C CDC15P27636 974 aa3.13□□□□□ -1.91
SSN8YNL025C ERV1P27882 189 aa3.13□□□□□ -1.91
SSN8YNL025C HSP104P31539 908 aaKnown RBP3.13□□□□□ -1.91
SSN8YNL025C NDI1P32340 513 aa3.13□□□□□ -1.91
SSN8YNL025C YPT7P32939 208 aa3.13□□□□□ -1.91
SSN8YNL025C HCS1P34243 683 aa3.13□□□□□ -1.91
SSN8YNL025C CMC1P36064 111 aa3.13□□□□□ -1.91
SSN8YNL025C AUR1P36107 401 aaPredicted RBP3.13□□□□□ -1.91
SSN8YNL025C GLG1P36143 616 aa3.13□□□□□ -1.91
SSN8YNL025C PXL1P36166 706 aa3.13□□□□□ -1.91
SSN8YNL025C ATP3P38077 311 aaKnown RBP3.13□□□□□ -1.91
SSN8YNL025C KTR3P38130 404 aaPredicted RBP3.13□□□□□ -1.91
SSN8YNL025C SRO77P38163 1010 aa3.13□□□□□ -1.91
SSN8YNL025C APN2P38207 520 aa3.13□□□□□ -1.91
SSN8YNL025C YSW1P38280 609 aa3.13□□□□□ -1.91
SSN8YNL025C RFC3P38629 340 aa3.13□□□□□ -1.91
SSN8YNL025C MIP6P38760 659 aaKnown RBP3.13□□□□□ -1.91
SSN8YNL025C BZZ1P38822 633 aa3.13□□□□□ -1.91
SSN8YNL025C MNN9P39107 395 aaKnown RBP3.13□□□□□ -1.91
SSN8YNL025C YEL057CP39983 233 aa3.13□□□□□ -1.91
SSN8YNL025C ASG1P40467 964 aa3.13□□□□□ -1.91
SSN8YNL025C DLD2P46681 530 aaKnown RBP3.13□□□□□ -1.91
SSN8YNL025C TWF1P53250 332 aa3.13□□□□□ -1.91
SSN8YNL025C MPP6P53725 186 aaPredicted RBP3.13□□□□□ -1.91
SSN8YNL025C APM1Q00776 475 aaPredicted RBP3.13□□□□□ -1.91
SSN8YNL025C NGL3Q03210 505 aa3.13□□□□□ -1.91
SSN8YNL025C RPN9Q04062 393 aaKnown RBP3.13□□□□□ -1.91
SSN8YNL025C MRPL1Q04599 285 aa3.13□□□□□ -1.91
SSN8YNL025C SOV1Q04748 898 aa3.13□□□□□ -1.91
SSN8YNL025C MSC3Q05812 728 aa3.13□□□□□ -1.91
SSN8YNL025C VPS38Q05919 439 aa3.13□□□□□ -1.91
SSN8YNL025C SMD2Q06217 110 aaKnown RBP3.13□□□□□ -1.91
SSN8YNL025C YFH1Q07540 174 aa3.13□□□□□ -1.91
SSN8YNL025C PML1Q07930 204 aaPredicted RBP3.13□□□□□ -1.91
SSN8YNL025C SLK19Q08581 821 aaKnown RBP3.13□□□□□ -1.91
SSN8YNL025C CIR2Q08822 631 aa3.13□□□□□ -1.91
SSN8YNL025C RBD2Q12270 262 aa3.13□□□□□ -1.91
SSN8YNL025C AHC1Q12433 566 aa3.13□□□□□ -1.91
SSN8YNL025C YLR149CQ99296 730 aa3.13□□□□□ -1.91
SSN8YNL025C Q0142Q9ZZW4 58 aa3.13□□□□□ -1.91
SSN8YNL025C RPN13O13563 156 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 68.6 ms