RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	YGR250C	P53316	781 aa	Known RBP	1.53	□□□□□ -2.16
SMC4	YLR086W	IRC3	Q06683	689 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	CYK3	Q07533	885 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	HUA2	Q12134	243 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	SUT2	Q12286	268 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	YLR111W	Q12528	110 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	BRR1	Q99177	341 aa	Predicted RBP	1.53	□□□□□ -2.16
SMC4	YLR086W	COX1	P00401	534 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	CBP1	P07252	654 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	RFA2	P26754	273 aa	Known RBP	1.52	□□□□□ -2.17
SMC4	YLR086W	MRPL9	P31334	269 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	SOF1	P33750	489 aa	Known RBP	1.52	□□□□□ -2.17
SMC4	YLR086W	WBP1	P33767	430 aa	Known RBP	1.52	□□□□□ -2.17
SMC4	YLR086W	NUP133	P36161	1157 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	VPS41	P38959	992 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	LTP1	P40347	161 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	SEC24	P40482	926 aa	Known RBP	1.52	□□□□□ -2.17
SMC4	YLR086W	CIN1	P40987	1014 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	VTC2	P43585	828 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	YGL036W	P53185	909 aa	Predicted RBP	1.52	□□□□□ -2.17
SMC4	YLR086W	TWF1	P53250	332 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	THI3	Q07471	609 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	CIR2	Q08822	631 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	AHA1	Q12449	350 aa	Known RBP	1.52	□□□□□ -2.17
SMC4	YLR086W	AI5_ALPHA	Q9ZZX1	630 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	MF(ALPHA)1	P01149	165 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	HXK2	P04807	486 aa	Known RBP	1.52	□□□□□ -2.17
SMC4	YLR086W	ARG3	P05150	338 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	VPS15	P22219	1454 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	AAD3	P25612	363 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	SIP1	P32578	815 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	ORC2	P32833	620 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	TSC10	P38342	320 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	UBA4	P38820	440 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	SMF1	P38925	575 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	YEL068C	P39977	110 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	ULP2	P40537	1034 aa	Predicted RBP	1.52	□□□□□ -2.17
SMC4	YLR086W	NMD5	P46970	1048 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	ERG26	P53199	349 aa	Known RBP	1.52	□□□□□ -2.17
SMC4	YLR086W	MRPL19	P53875	158 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	SLG1	P54867	378 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	TRS23	Q03784	219 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	IRC20	Q06554	1556 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	PSR1	Q07800	427 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	FMP40	Q08968	688 aa	Predicted RBP	1.52	□□□□□ -2.17
SMC4	YLR086W	LEU9	Q12166	604 aa	Known RBP	1.52	□□□□□ -2.17
SMC4	YLR086W	YOR111W	Q99210	232 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	NUP170	P38181	1502 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	INH1	P01097	85 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	GEX1	P25596	615 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	LHS1	P36016	881 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	RTS1	P38903	757 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	SAP1	P39955	897 aa	Known RBP	1.52	□□□□□ -2.17
SMC4	YLR086W	VID30	P53076	958 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	ASI1	P54074	624 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	RAD30	Q04049	632 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	YDR109C	Q04585	715 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	MRD1	Q06106	887 aa	Known RBP	1.52	□□□□□ -2.17
SMC4	YLR086W	VTA1	Q06263	330 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	ENT4	Q07872	247 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	SLK19	Q08581	821 aa	Known RBP	1.52	□□□□□ -2.17
SMC4	YLR086W	TCO89	Q08921	799 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	ENT1	Q12518	454 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	AQY1	P0CD91	305 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	RPC53	P25441	422 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	BUD14	P27637	709 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	YBR144C	P34215	104 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	MTR2	P34232	184 aa	Known RBP	1.52	□□□□□ -2.17
SMC4	YLR086W	LRP1	P38801	184 aa	Known RBP	1.52	□□□□□ -2.17
SMC4	YLR086W	ELO1	P39540	310 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	ORC5	P50874	479 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	PYK2	P52489	506 aa	Known RBP	1.52	□□□□□ -2.17
SMC4	YLR086W	IDP3	P53982	420 aa	Known RBP	1.52	□□□□□ -2.17
SMC4	YLR086W	MSC1	Q03104	513 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	MFB1	Q04922	465 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	YOR365C	Q08844	703 aa		1.52	□□□□□ -2.17
SMC4	YLR086W	NCE102	Q12207	173 aa	RIP-Chip data	1.52	□□□□□ -2.17	not detected
SMC4	YLR086W	PDR5	P33302	1511 aa	Known RBP	1.51	□□□□□ -2.17
SMC4	YLR086W	VTH1	P40438	1549 aa		1.51	□□□□□ -2.17
SMC4	YLR086W	VTH2	P40890	1549 aa		1.51	□□□□□ -2.17
SMC4	YLR086W	TSC11	P40061	1430 aa		1.51	□□□□□ -2.17
SMC4	YLR086W	IKI3	Q06706	1349 aa	Known RBP	1.51	□□□□□ -2.17
SMC4	YLR086W	PUT2	P07275	575 aa		1.51	□□□□□ -2.17
SMC4	YLR086W	SUI3	P09064	285 aa	Known RBP	1.51	□□□□□ -2.17
SMC4	YLR086W	ILS1	P09436	1072 aa	Known RBP	1.51	□□□□□ -2.17
SMC4	YLR086W	TUB1	P09733	447 aa	Known RBP	1.51	□□□□□ -2.17
SMC4	YLR086W	CBS1	P14066	229 aa		1.51	□□□□□ -2.17
SMC4	YLR086W	PRP2	P20095	876 aa	Predicted RBP	1.51	□□□□□ -2.17
SMC4	YLR086W	HOT13	P36078	116 aa		1.51	□□□□□ -2.17
SMC4	YLR086W	OTU2	P38747	307 aa	Known RBP	1.51	□□□□□ -2.17
SMC4	YLR086W	YEL057C	P39983	233 aa		1.51	□□□□□ -2.17
SMC4	YLR086W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	1.51	□□□□□ -2.17	not detected
SMC4	YLR086W	NGL3	Q03210	505 aa		1.51	□□□□□ -2.17
SMC4	YLR086W	LUC7	Q07508	261 aa	Predicted RBP	1.51	□□□□□ -2.17
SMC4	YLR086W	YOR019W	Q99248	730 aa		1.51	□□□□□ -2.17
SMC4	YLR086W	SNQ2	P32568	1501 aa	Known RBP	1.51	□□□□□ -2.17
SMC4	YLR086W	PDR12	Q02785	1511 aa		1.51	□□□□□ -2.17
SMC4	YLR086W	UFD4	P33202	1483 aa		1.51	□□□□□ -2.17
SMC4	YLR086W	NUP159	P40477	1460 aa		1.51	□□□□□ -2.17
SMC4	YLR086W	ARD1	P07347	238 aa	Predicted RBP	1.51	□□□□□ -2.17

Retrieved 100 of 5,963 RNA–protein pairs in 62 ms