RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C CLD1P53264 445 aa10.33□□□□□ -0.76
SHM2YLR058C SUB1P54000 292 aaKnown RBP10.33□□□□□ -0.76
SHM2YLR058C RMI1Q02685 241 aa10.33□□□□□ -0.76
SHM2YLR058C VPS16Q03308 798 aa10.33□□□□□ -0.76
SHM2YLR058C TRM12Q04235 462 aa10.33□□□□□ -0.76
SHM2YLR058C HPF1Q05164 967 aa10.33□□□□□ -0.76
SHM2YLR058C ATG10Q07879 167 aa10.33□□□□□ -0.76
SHM2YLR058C YOR012WQ12351 137 aa10.33□□□□□ -0.76
SHM2YLR058C GTT2Q12390 233 aa10.33□□□□□ -0.76
SHM2YLR058C YPT6Q99260 215 aa10.33□□□□□ -0.76
SHM2YLR058C Q0182Q9ZZW1 134 aa10.33□□□□□ -0.76
SHM2YLR058C SUC2P00724 532 aa10.33□□□□□ -0.76
SHM2YLR058C CPA1P07258 411 aaKnown RBP10.33□□□□□ -0.76
SHM2YLR058C HOM2P13663 365 aaKnown RBP10.33□□□□□ -0.76
SHM2YLR058C HSC82P15108 705 aaKnown RBP10.33□□□□□ -0.76
SHM2YLR058C RFA2P26754 273 aaKnown RBP10.33□□□□□ -0.76
SHM2YLR058C CWC24P53769 259 aa10.33□□□□□ -0.76
SHM2YLR058C SSL1Q04673 461 aaPredicted RBP10.33□□□□□ -0.76
SHM2YLR058C OPI10Q08202 246 aa10.33□□□□□ -0.76
SHM2YLR058C ALR1Q08269 859 aa10.33□□□□□ -0.76
SHM2YLR058C SAM4Q08985 325 aaKnown RBP10.33□□□□□ -0.76
SHM2YLR058C SEM1O94742 89 aa10.32□□□□□ -0.76
SHM2YLR058C PHO5P00635 467 aa10.32□□□□□ -0.76
SHM2YLR058C HEM2P05373 342 aa10.32□□□□□ -0.76
SHM2YLR058C CHL1P22516 861 aaPredicted RBP10.32□□□□□ -0.76
SHM2YLR058C SKT5P34226 696 aa10.32□□□□□ -0.76
SHM2YLR058C HEK2P38199 381 aaKnown RBP RIP-Chip data10.32□□□□□ -0.76not detected
SHM2YLR058C CYC2P38909 366 aa10.32□□□□□ -0.76
SHM2YLR058C SEC31P38968 1273 aaKnown RBP10.32□□□□□ -0.76
SHM2YLR058C GAT1P43574 510 aa10.32□□□□□ -0.76
SHM2YLR058C RSC3Q06639 885 aa10.32□□□□□ -0.76
SHM2YLR058C RIB2Q12362 591 aaKnown RBP10.32□□□□□ -0.76
SHM2YLR058C YKR104WP0CE69 306 aa10.31□□□□□ -0.76
SHM2YLR058C SEC15P22224 910 aa10.31□□□□□ -0.76
SHM2YLR058C NPP1P25353 742 aa10.31□□□□□ -0.76
SHM2YLR058C RML2P32611 393 aa10.31□□□□□ -0.76
SHM2YLR058C GMH1P36125 273 aa10.31□□□□□ -0.76
SHM2YLR058C GIP1P38229 639 aa10.31□□□□□ -0.76
SHM2YLR058C SSN3P39073 555 aa10.31□□□□□ -0.76
SHM2YLR058C COA1P40452 197 aa10.31□□□□□ -0.76
SHM2YLR058C TIS11P47977 285 aa10.31□□□□□ -0.76
SHM2YLR058C YGL108CP53139 140 aa10.31□□□□□ -0.76
SHM2YLR058C LSM3P57743 89 aaKnown RBP10.31□□□□□ -0.76
SHM2YLR058C CCE1Q03702 353 aa10.31□□□□□ -0.76
SHM2YLR058C HDA3Q06623 655 aa10.31□□□□□ -0.76
SHM2YLR058C PHO84P25297 587 aaKnown RBP10.3□□□□□ -0.76
SHM2YLR058C SNT1P25357 1226 aa10.3□□□□□ -0.76
SHM2YLR058C OXP1P28273 1286 aa10.3□□□□□ -0.76
SHM2YLR058C CCR4P31384 837 aaKnown RBP10.3□□□□□ -0.76
SHM2YLR058C PTH2P34222 208 aa10.3□□□□□ -0.76
SHM2YLR058C NUP120P35729 1037 aa10.3□□□□□ -0.76
SHM2YLR058C YKL151CP36059 337 aa10.3□□□□□ -0.76
SHM2YLR058C TCD2P36101 447 aaKnown RBP10.3□□□□□ -0.76
SHM2YLR058C CTP1P38152 299 aa10.3□□□□□ -0.76
SHM2YLR058C YHR020WP38708 688 aaKnown RBP10.3□□□□□ -0.76
SHM2YLR058C HSE1P38753 452 aa10.3□□□□□ -0.76
SHM2YLR058C YHR045WP38775 560 aa10.3□□□□□ -0.76
SHM2YLR058C VMA13P41807 478 aaKnown RBP10.3□□□□□ -0.76
SHM2YLR058C UBP6P43593 499 aaKnown RBP10.3□□□□□ -0.76
SHM2YLR058C NNF1P47149 201 aa10.3□□□□□ -0.76
SHM2YLR058C MRM2P53123 320 aa10.3□□□□□ -0.76
SHM2YLR058C NIS1P53939 407 aa10.3□□□□□ -0.76
SHM2YLR058C ARX1Q03862 593 aaKnown RBP10.3□□□□□ -0.76
SHM2YLR058C EMI1Q04406 187 aa10.3□□□□□ -0.76
SHM2YLR058C VAM6Q07468 1049 aa10.3□□□□□ -0.76
SHM2YLR058C NAG1Q8TGN9 163 aa10.3□□□□□ -0.76
SHM2YLR058C NMT1P14743 455 aa10.29□□□□□ -0.76
SHM2YLR058C PRP16P15938 1071 aaPredicted RBP10.29□□□□□ -0.76
SHM2YLR058C ART10P18634 518 aaKnown RBP10.29□□□□□ -0.76
SHM2YLR058C HCM1P25364 564 aa10.29□□□□□ -0.76
SHM2YLR058C DEP1P31385 405 aa10.29□□□□□ -0.76
SHM2YLR058C EAP1P36041 632 aaKnown RBP10.29□□□□□ -0.76
SHM2YLR058C HXT5P38695 592 aa10.29□□□□□ -0.76
SHM2YLR058C SHU2P38957 223 aa10.29□□□□□ -0.76
SHM2YLR058C MEP1P40260 492 aa10.29□□□□□ -0.76
SHM2YLR058C YRB1P41920 201 aaKnown RBP10.29□□□□□ -0.76
SHM2YLR058C YFR018CP43599 363 aa10.29□□□□□ -0.76
SHM2YLR058C RNR4P49723 345 aaKnown RBP10.29□□□□□ -0.76
SHM2YLR058C EFM5P53200 248 aaKnown RBP10.29□□□□□ -0.76
SHM2YLR058C IBD2P53892 351 aa10.29□□□□□ -0.76
SHM2YLR058C SLM2P53955 656 aa10.29□□□□□ -0.76
SHM2YLR058C TGL2P54857 326 aa10.29□□□□□ -0.76
SHM2YLR058C RIF2Q06208 395 aa10.29□□□□□ -0.76
SHM2YLR058C YOL019WQ08157 551 aa10.29□□□□□ -0.76
SHM2YLR058C FMP27Q06179 2628 aa10.29□□□□□ -0.76
SHM2YLR058C TOR2P32600 2474 aaKnown RBP10.28□□□□□ -0.76
SHM2YLR058C YAR066WP0CX18 203 aa10.28□□□□□ -0.76
SHM2YLR058C YHR214WP0CX19 203 aa10.28□□□□□ -0.76
SHM2YLR058C PRP4P20053 465 aaKnown RBP10.28□□□□□ -0.76
SHM2YLR058C RSC6P25632 483 aa10.28□□□□□ -0.76
SHM2YLR058C ERP5P38819 212 aa10.28□□□□□ -0.76
SHM2YLR058C DHH1P39517 506 aaKnown RBP10.28□□□□□ -0.76
SHM2YLR058C COQ5P49017 307 aa10.28□□□□□ -0.76
SHM2YLR058C SNO2P53823 222 aa10.28□□□□□ -0.76
SHM2YLR058C ARG7Q04728 441 aa10.28□□□□□ -0.76
SHM2YLR058C TRM8Q12009 286 aa10.28□□□□□ -0.76
SHM2YLR058C INH1P01097 85 aa10.27□□□□□ -0.77
SHM2YLR058C POL30P15873 258 aaKnown RBP10.27□□□□□ -0.77
SHM2YLR058C VPS34P22543 875 aa10.27□□□□□ -0.77
SHM2YLR058C SIS1P25294 352 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms