RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG1	YKR100C	SWD1	P39706	426 aa		5.89	□□□□□ -1.47
SKG1	YKR100C	CFD1	P40558	293 aa		5.89	□□□□□ -1.47
SKG1	YKR100C	IRC8	P47046	822 aa		5.89	□□□□□ -1.47
SKG1	YKR100C	AAT1	Q01802	451 aa		5.89	□□□□□ -1.47
SKG1	YKR100C	YOL057W	Q08225	711 aa		5.89	□□□□□ -1.47
SKG1	YKR100C	HER1	Q12276	1246 aa		5.89	□□□□□ -1.47
SKG1	YKR100C	YPR089W	O13585	888 aa		5.88	□□□□□ -1.47
SKG1	YKR100C	SES1	P07284	462 aa	Known RBP	5.88	□□□□□ -1.47
SKG1	YKR100C	SSB1	P11484	613 aa	Known RBP	5.88	□□□□□ -1.47
SKG1	YKR100C	NUP133	P36161	1157 aa		5.88	□□□□□ -1.47
SKG1	YKR100C	YLF2	P38746	405 aa		5.88	□□□□□ -1.47
SKG1	YKR100C	SSB2	P40150	613 aa	Known RBP	5.88	□□□□□ -1.47
SKG1	YKR100C	LYS21	Q12122	440 aa	Known RBP	5.88	□□□□□ -1.47
SKG1	YKR100C	TFB1	P32776	642 aa		5.87	□□□□□ -1.47
SKG1	YKR100C	GCS1	P35197	352 aa		5.87	□□□□□ -1.47
SKG1	YKR100C	TCD2	P36101	447 aa	Known RBP	5.87	□□□□□ -1.47
SKG1	YKR100C	FLO5	P38894	1075 aa		5.87	□□□□□ -1.47
SKG1	YKR100C	ASK10	P48361	1146 aa		5.87	□□□□□ -1.47
SKG1	YKR100C	TDA9	Q04545	1251 aa		5.87	□□□□□ -1.47
SKG1	YKR100C	CRD1	Q07560	283 aa		5.87	□□□□□ -1.47
SKG1	YKR100C	POL2	P21951	2222 aa	Known RBP	5.87	□□□□□ -1.47
SKG1	YKR100C	ILS1	P09436	1072 aa	Known RBP	5.86	□□□□□ -1.47
SKG1	YKR100C	YCL042W	P25572	119 aa		5.86	□□□□□ -1.47
SKG1	YKR100C	YMR124W	P39523	943 aa	Known RBP	5.86	□□□□□ -1.47
SKG1	YKR100C	AAD4	Q07747	329 aa		5.86	□□□□□ -1.47
SKG1	YKR100C	MPD2	Q99316	277 aa		5.86	□□□□□ -1.47
SKG1	YKR100C	MSS51	P32335	436 aa		5.85	□□□□□ -1.47
SKG1	YKR100C	ERV46	P39727	415 aa		5.85	□□□□□ -1.47
SKG1	YKR100C	CEG1	Q01159	459 aa	Predicted RBP	5.85	□□□□□ -1.47
SKG1	YKR100C	SUL2	Q12325	893 aa		5.85	□□□□□ -1.47
SKG1	YKR100C	GAL4	P04386	881 aa		5.84	□□□□□ -1.47
SKG1	YKR100C	VBA2	P38358	474 aa	Known RBP	5.84	□□□□□ -1.47
SKG1	YKR100C	MED6	P38782	295 aa		5.84	□□□□□ -1.47
SKG1	YKR100C	ESL1	P40456	1118 aa		5.84	□□□□□ -1.47
SKG1	YKR100C	ESF2	P53743	316 aa	Known RBP	5.84	□□□□□ -1.47
SKG1	YKR100C	AIM6	Q07716	390 aa		5.84	□□□□□ -1.47
SKG1	YKR100C	PDH1	Q12428	516 aa	Known RBP	5.84	□□□□□ -1.47
SKG1	YKR100C	RIP1	P08067	215 aa		5.83	□□□□□ -1.48
SKG1	YKR100C	PCA1	P38360	1216 aa		5.83	□□□□□ -1.48
SKG1	YKR100C	RPL15B	P54780	204 aa	Predicted RBP	5.83	□□□□□ -1.48
SKG1	YKR100C	TGL2	P54857	326 aa		5.83	□□□□□ -1.48
SKG1	YKR100C	ARA2	Q04212	335 aa		5.83	□□□□□ -1.48
SKG1	YKR100C	MRPL1	Q04599	285 aa		5.83	□□□□□ -1.48
SKG1	YKR100C	SKG3	Q06315	1026 aa		5.83	□□□□□ -1.48
SKG1	YKR100C	VIP1	Q06685	1146 aa	Known RBP	5.83	□□□□□ -1.48
SKG1	YKR100C	YPL191C	Q08930	360 aa		5.83	□□□□□ -1.48
SKG1	YKR100C	PFA4	Q12006	378 aa		5.83	□□□□□ -1.48
SKG1	YKR100C	ERC1	P38767	581 aa		5.82	□□□□□ -1.48
SKG1	YKR100C	UBP7	P40453	1071 aa		5.82	□□□□□ -1.48
SKG1	YKR100C	GET3	Q12154	354 aa	Known RBP	5.82	□□□□□ -1.48
SKG1	YKR100C	ARP7	Q12406	477 aa		5.82	□□□□□ -1.48
SKG1	YKR100C	YPT1	P01123	206 aa	Known RBP	5.81	□□□□□ -1.48
SKG1	YKR100C	YCP4	P25349	247 aa	Known RBP	5.81	□□□□□ -1.48
SKG1	YKR100C	PEX34	P25584	144 aa		5.81	□□□□□ -1.48
SKG1	YKR100C	GSH1	P32477	678 aa		5.81	□□□□□ -1.48
SKG1	YKR100C	SIP1	P32578	815 aa		5.81	□□□□□ -1.48
SKG1	YKR100C	RPF2	P36160	344 aa	Known RBP	5.81	□□□□□ -1.48
SKG1	YKR100C	PXL1	P36166	706 aa		5.81	□□□□□ -1.48
SKG1	YKR100C	ILV2	P07342	687 aa	Known RBP	5.8	□□□□□ -1.48
SKG1	YKR100C	SEC18	P18759	758 aa	Known RBP	5.8	□□□□□ -1.48
SKG1	YKR100C	SAM2	P19358	384 aa	Known RBP	5.8	□□□□□ -1.48
SKG1	YKR100C	AIM17	P23180	465 aa	Known RBP	5.8	□□□□□ -1.48
SKG1	YKR100C	BUD2	P33314	1104 aa		5.8	□□□□□ -1.48
SKG1	YKR100C	MAD3	P47074	515 aa		5.8	□□□□□ -1.48
SKG1	YKR100C	LIF1	P53150	421 aa		5.8	□□□□□ -1.48
SKG1	YKR100C	IPP1	P00817	287 aa	Known RBP	5.79	□□□□□ -1.48
SKG1	YKR100C	PDE1	P22434	369 aa		5.79	□□□□□ -1.48
SKG1	YKR100C	CSE1	P33307	960 aa		5.79	□□□□□ -1.48
SKG1	YKR100C	NPA3	P47122	385 aa		5.79	□□□□□ -1.48
SKG1	YKR100C	SND1	Q04007	877 aa		5.79	□□□□□ -1.48
SKG1	YKR100C	YBR255C-A	Q3E776	120 aa		5.79	□□□□□ -1.48
SKG1	YKR100C	YIL046W-A	Q3E7Z4	54 aa		5.79	□□□□□ -1.48
SKG1	YKR100C	PTC6	P25646	442 aa		5.78	□□□□□ -1.48
SKG1	YKR100C	MEP2	P41948	499 aa		5.78	□□□□□ -1.48
SKG1	YKR100C	NIC96	P34077	839 aa		5.77	□□□□□ -1.49
SKG1	YKR100C	STB2	P46679	850 aa		5.77	□□□□□ -1.49
SKG1	YKR100C	LYS20	P48570	428 aa	Known RBP	5.77	□□□□□ -1.49
SKG1	YKR100C	ORC5	P50874	479 aa		5.77	□□□□□ -1.49
SKG1	YKR100C	MDM1	Q01846	1127 aa		5.77	□□□□□ -1.49
SKG1	YKR100C	YHL026C	P38740	315 aa		5.76	□□□□□ -1.49
SKG1	YKR100C	STT3	P39007	718 aa	Known RBP	5.76	□□□□□ -1.49
SKG1	YKR100C	YJL107C	P42947	387 aa		5.76	□□□□□ -1.49
SKG1	YKR100C	SAD1	P43589	448 aa		5.76	□□□□□ -1.49
SKG1	YKR100C	ALT2	P52892	507 aa		5.76	□□□□□ -1.49
SKG1	YKR100C	IMP4	P53941	290 aa	Known RBP	5.76	□□□□□ -1.49
SKG1	YKR100C	SUR7	P54003	302 aa		5.76	□□□□□ -1.49
SKG1	YKR100C	LEA1	Q08963	238 aa	Predicted RBP	5.76	□□□□□ -1.49
SKG1	YKR100C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	5.76	□□□□□ -1.49	not detected
SKG1	YKR100C	YOL114C	Q12322	202 aa		5.76	□□□□□ -1.49
SKG1	YKR100C	RRI2	Q12348	645 aa		5.76	□□□□□ -1.49
SKG1	YKR100C	TY1B-A	O13527	1196 aa	Known RBP	5.75	□□□□□ -1.49
SKG1	YKR100C	COX1	P00401	534 aa		5.75	□□□□□ -1.49
SKG1	YKR100C	CHS3	P29465	1165 aa		5.75	□□□□□ -1.49
SKG1	YKR100C	SWC3	P31376	625 aa		5.75	□□□□□ -1.49
SKG1	YKR100C	GND1	P38720	489 aa	Known RBP	5.75	□□□□□ -1.49
SKG1	YKR100C	MDV1	P47025	714 aa		5.75	□□□□□ -1.49
SKG1	YKR100C	ATX2	Q12067	313 aa		5.75	□□□□□ -1.49
SKG1	YKR100C	RRI1	Q12468	440 aa		5.75	□□□□□ -1.49
SKG1	YKR100C	CYB2	P00175	591 aa		5.74	□□□□□ -1.49
SKG1	YKR100C	CNA1	P23287	553 aa		5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 103.1 ms