RNA–Protein interactions for RNA: YKR082W

NUP133, Transcript of Subunit of Nup84p subcomplex of nuclear pore complex (NPC), yeast

Gene NUP133, Length 3,474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP133	YKR082W	GTO1	P48239	356 aa		4.09	□□□□□ -1.75
NUP133	YKR082W	APT1	P49435	187 aa	Known RBP	4.09	□□□□□ -1.75
NUP133	YKR082W	SNO4	Q04902	237 aa		4.09	□□□□□ -1.75
NUP133	YKR082W	HIM1	Q06674	414 aa		4.09	□□□□□ -1.75
NUP133	YKR082W	SYO1	Q07395	620 aa		4.09	□□□□□ -1.75
NUP133	YKR082W	HSP33	Q08914	237 aa	Known RBP	4.09	□□□□□ -1.75
NUP133	YKR082W	HSP32	Q08992	237 aa		4.09	□□□□□ -1.75
NUP133	YKR082W	HMS1	Q12398	434 aa		4.09	□□□□□ -1.75
NUP133	YKR082W	KRE5	P22023	1365 aa		4.09	□□□□□ -1.75
NUP133	YKR082W	PDC1	P06169	563 aa	Known RBP	4.09	□□□□□ -1.76
NUP133	YKR082W	SIR3	P06701	978 aa		4.09	□□□□□ -1.76
NUP133	YKR082W	KIN2	P13186	1147 aa	Known RBP	4.09	□□□□□ -1.76
NUP133	YKR082W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.76	not detected
NUP133	YKR082W	PET18	P25362	215 aa		4.09	□□□□□ -1.76
NUP133	YKR082W	YCR051W	P25631	222 aa		4.09	□□□□□ -1.76
NUP133	YKR082W	RER2	P35196	286 aa		4.09	□□□□□ -1.76
NUP133	YKR082W	AIM29	P36154	155 aa		4.09	□□□□□ -1.76
NUP133	YKR082W	MRPL37	P36532	105 aa		4.09	□□□□□ -1.76
NUP133	YKR082W	APE3	P37302	537 aa	Known RBP	4.09	□□□□□ -1.76
NUP133	YKR082W	CST26	P38226	397 aa		4.09	□□□□□ -1.76
NUP133	YKR082W	PZF1	P39933	429 aa		4.09	□□□□□ -1.76
NUP133	YKR082W	MET28	P40573	187 aa		4.09	□□□□□ -1.76
NUP133	YKR082W	LYS14	P40971	790 aa		4.09	□□□□□ -1.76
NUP133	YKR082W	ARC1	P46672	376 aa	Known RBP	4.09	□□□□□ -1.76
NUP133	YKR082W	PRP31	P49704	494 aa	Predicted RBP	4.09	□□□□□ -1.76
NUP133	YKR082W	STE20	Q03497	939 aa	Known RBP	4.09	□□□□□ -1.76
NUP133	YKR082W	INP54	Q08227	384 aa	Known RBP	4.09	□□□□□ -1.76
NUP133	YKR082W	ZRT2	Q12436	422 aa		4.09	□□□□□ -1.76
NUP133	YKR082W	MRPL23	Q12487	163 aa	Predicted RBP	4.09	□□□□□ -1.76
NUP133	YKR082W	CDC10	P25342	322 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	YCL068C	P25593	260 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	YCR061W	P25639	631 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	GCD11	P32481	527 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	UGA4	P32837	571 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	YER184C	P39961	794 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	YFL034W	P43564	1073 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	DUO1	P53168	247 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	YNL143C	P53908	130 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	YNL134C	P53912	376 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	HEF3	P53978	1044 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	HCR1	Q05775	265 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	VAM6	Q07468	1049 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	MUM3	Q08750	479 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
NUP133	YKR082W	ATG31	Q12421	196 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	FLP1	P03870	423 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	RPL6B	P05739	176 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	VAS1	P07806	1104 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	SUI3	P09064	285 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	CAP1	P28495	268 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	CYM1	P32898	989 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	YBR242W	P38331	238 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	PSD1	P39006	500 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	NET1	P47035	1189 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	PPT1	P53043	513 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	CUE3	P53137	624 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	YGR066C	P53242	292 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	RPL6A	Q02326	176 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	MRPL1	Q04599	285 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	SOV1	Q04748	898 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	DFG5	Q05031	458 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	VPS74	Q06385	345 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	ATG33	Q06485	197 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	UAF30	Q08747	228 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	GET3	Q12154	354 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	MDM20	Q12387	796 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	RPS21A	P0C0V8	87 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	ABF1	P14164	731 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	FBA1	P14540	359 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	FAA1	P30624	700 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	MCM4	P30665	933 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	ISC10	P32645	267 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	ALY1	P36117	915 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	PPE1	P38796	400 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	SOL3	P38858	249 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	YEL025C	P39991	1188 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	GIM4	P40005	111 aa	Known RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	ATM1	P40416	690 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	TWF1	P53250	332 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	CTF19	Q02732	369 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	TAF12	Q03761	539 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	CSI1	Q04368	295 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	CSC1	Q06538	782 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	OMS1	Q06668	471 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	FMP45	Q07651	309 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	XYL2	Q07993	356 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	CWC2	Q12046	339 aa	Predicted RBP	4.08	□□□□□ -1.76
NUP133	YKR082W	AUS1	Q08409	1394 aa		4.08	□□□□□ -1.76
NUP133	YKR082W	DCD1	P06773	312 aa		4.07	□□□□□ -1.76
NUP133	YKR082W	NUC1	P08466	329 aa		4.07	□□□□□ -1.76
NUP133	YKR082W	PCK1	P10963	549 aa		4.07	□□□□□ -1.76
NUP133	YKR082W	RNR1	P21524	888 aa	Known RBP	4.07	□□□□□ -1.76
NUP133	YKR082W	MSC7	P38694	644 aa		4.07	□□□□□ -1.76
NUP133	YKR082W	DYS1	P38791	387 aa		4.07	□□□□□ -1.76
NUP133	YKR082W	RIO2	P40160	425 aa	Known RBP	4.07	□□□□□ -1.76
NUP133	YKR082W	UFE1	P41834	346 aa		4.07	□□□□□ -1.76
NUP133	YKR082W	ZPR1	P53303	486 aa	Known RBP	4.07	□□□□□ -1.76
NUP133	YKR082W	RRN9	P53437	365 aa		4.07	□□□□□ -1.76
NUP133	YKR082W	DCR2	Q05924	578 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms