RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W ERP4Q12450 207 aa2.27□□□□□ -2.05
SMD1YGR074W YPT6Q99260 215 aa2.27□□□□□ -2.05
SMD1YGR074W PGK1P00560 416 aaKnown RBP2.26□□□□□ -2.05
SMD1YGR074W MET17P06106 444 aa2.26□□□□□ -2.05
SMD1YGR074W ARD1P07347 238 aaPredicted RBP2.26□□□□□ -2.05
SMD1YGR074W PET111P08468 800 aa2.26□□□□□ -2.05
SMD1YGR074W KRS1P15180 591 aaKnown RBP2.26□□□□□ -2.05
SMD1YGR074W RPB8P20436 146 aa2.26□□□□□ -2.05
SMD1YGR074W NUP1P20676 1076 aa2.26□□□□□ -2.05
SMD1YGR074W REC107P21651 314 aa2.26□□□□□ -2.05
SMD1YGR074W TKL1P23254 680 aaKnown RBP2.26□□□□□ -2.05
SMD1YGR074W CLB3P24870 427 aa2.26□□□□□ -2.05
SMD1YGR074W BOS1P25385 244 aa2.26□□□□□ -2.05
SMD1YGR074W DBF4P32325 704 aa2.26□□□□□ -2.05
SMD1YGR074W YBR144CP34215 104 aa2.26□□□□□ -2.05
SMD1YGR074W OCT1P35999 772 aa2.26□□□□□ -2.05
SMD1YGR074W STV1P37296 890 aa2.26□□□□□ -2.05
SMD1YGR074W CST26P38226 397 aa2.26□□□□□ -2.05
SMD1YGR074W DBP8P38719 431 aa2.26□□□□□ -2.05
SMD1YGR074W OTU2P38747 307 aaKnown RBP2.26□□□□□ -2.05
SMD1YGR074W VRG4P40107 337 aa2.26□□□□□ -2.05
SMD1YGR074W RGI2P40188 164 aa2.26□□□□□ -2.05
SMD1YGR074W BPL1P48445 690 aaPredicted RBP2.26□□□□□ -2.05
SMD1YGR074W YPR003CP53394 754 aa2.26□□□□□ -2.05
SMD1YGR074W YNR061CP53747 219 aa2.26□□□□□ -2.05
SMD1YGR074W YNL144CP53907 740 aa2.26□□□□□ -2.05
SMD1YGR074W ERG13P54839 491 aaKnown RBP2.26□□□□□ -2.05
SMD1YGR074W NGL3Q03210 505 aa2.26□□□□□ -2.05
SMD1YGR074W YDR239CQ03780 787 aa2.26□□□□□ -2.05
SMD1YGR074W TAF11Q04226 346 aa2.26□□□□□ -2.05
SMD1YGR074W EMI2Q04409 500 aaKnown RBP2.26□□□□□ -2.05
SMD1YGR074W AVL9Q12500 764 aa2.26□□□□□ -2.05
SMD1YGR074W Q0010Q9ZZX9 128 aa2.26□□□□□ -2.05
SMD1YGR074W YML133CQ03099 1374 aa2.25□□□□□ -2.05
SMD1YGR074W YLL067CQ07888 1374 aa2.25□□□□□ -2.05
SMD1YGR074W YLL066CQ99208 1374 aa2.25□□□□□ -2.05
SMD1YGR074W GAL80P04387 435 aa2.25□□□□□ -2.05
SMD1YGR074W ARG81P05085 880 aa2.25□□□□□ -2.05
SMD1YGR074W PDA1P16387 420 aaKnown RBP2.25□□□□□ -2.05
SMD1YGR074W KAR3P17119 729 aa2.25□□□□□ -2.05
SMD1YGR074W SUI2P20459 304 aaKnown RBP2.25□□□□□ -2.05
SMD1YGR074W MAK32P23060 363 aa2.25□□□□□ -2.05
SMD1YGR074W IMG1P25626 169 aa2.25□□□□□ -2.05
SMD1YGR074W SSE2P32590 693 aaKnown RBP2.25□□□□□ -2.05
SMD1YGR074W YME1P32795 747 aa2.25□□□□□ -2.05
SMD1YGR074W NPL6P32832 435 aa2.25□□□□□ -2.05
SMD1YGR074W SNU114P36048 1008 aaKnown RBP2.25□□□□□ -2.05
SMD1YGR074W BYE1P36106 594 aa2.25□□□□□ -2.05
SMD1YGR074W SCO2P38072 301 aa2.25□□□□□ -2.05
SMD1YGR074W SRO77P38163 1010 aa2.25□□□□□ -2.05
SMD1YGR074W VID24P38263 362 aa2.25□□□□□ -2.05
SMD1YGR074W IMD2P38697 523 aaKnown RBP2.25□□□□□ -2.05
SMD1YGR074W ARN1P38731 627 aa2.25□□□□□ -2.05
SMD1YGR074W CIN1P40987 1014 aa2.25□□□□□ -2.05
SMD1YGR074W MAF1P41910 395 aa2.25□□□□□ -2.05
SMD1YGR074W VPS25P47142 202 aa2.25□□□□□ -2.05
SMD1YGR074W LYS4P49367 693 aaPredicted RBP2.25□□□□□ -2.05
SMD1YGR074W IMD3P50095 523 aaKnown RBP2.25□□□□□ -2.05
SMD1YGR074W IPI3P53877 555 aa2.25□□□□□ -2.05
SMD1YGR074W EFM6P53970 246 aa2.25□□□□□ -2.05
SMD1YGR074W MAK10Q02197 733 aa2.25□□□□□ -2.05
SMD1YGR074W SWF1Q04629 336 aa2.25□□□□□ -2.05
SMD1YGR074W UTP21Q06078 939 aaPredicted RBP2.25□□□□□ -2.05
SMD1YGR074W YLR455WQ06188 304 aa2.25□□□□□ -2.05
SMD1YGR074W ECM30Q06673 1274 aa2.25□□□□□ -2.05
SMD1YGR074W ETT1Q08421 412 aaKnown RBP2.25□□□□□ -2.05
SMD1YGR074W BUD7Q08754 746 aa2.25□□□□□ -2.05
SMD1YGR074W COQ3P27680 312 aa2.24□□□□□ -2.05
SMD1YGR074W PAP1P29468 568 aaKnown RBP2.24□□□□□ -2.05
SMD1YGR074W PEX5P35056 612 aa2.24□□□□□ -2.05
SMD1YGR074W RFC1P38630 861 aaKnown RBP2.24□□□□□ -2.05
SMD1YGR074W ELO1P39540 310 aa2.24□□□□□ -2.05
SMD1YGR074W GPD2P41911 440 aaKnown RBP2.24□□□□□ -2.05
SMD1YGR074W SSU1P41930 458 aa2.24□□□□□ -2.05
SMD1YGR074W YJL107CP42947 387 aa2.24□□□□□ -2.05
SMD1YGR074W NMD5P46970 1048 aa2.24□□□□□ -2.05
SMD1YGR074W ERG26P53199 349 aaKnown RBP2.24□□□□□ -2.05
SMD1YGR074W BOP3P53958 396 aa2.24□□□□□ -2.05
SMD1YGR074W IDP3P53982 420 aaKnown RBP2.24□□□□□ -2.05
SMD1YGR074W ECM22Q05958 814 aaPredicted RBP2.24□□□□□ -2.05
SMD1YGR074W MCP2Q06567 569 aa2.24□□□□□ -2.05
SMD1YGR074W CIR2Q08822 631 aa2.24□□□□□ -2.05
SMD1YGR074W ATG29Q12092 213 aa2.24□□□□□ -2.05
SMD1YGR074W GET3Q12154 354 aaKnown RBP2.24□□□□□ -2.05
SMD1YGR074W ISA2Q12425 185 aa2.24□□□□□ -2.05
SMD1YGR074W RTN2Q12443 393 aa2.24□□□□□ -2.05
SMD1YGR074W SPE4Q12455 300 aa2.24□□□□□ -2.05
SMD1YGR074W RRI1Q12468 440 aa2.24□□□□□ -2.05
SMD1YGR074W SGS1P35187 1447 aa2.24□□□□□ -2.05
SMD1YGR074W ART10P18634 518 aaKnown RBP2.23□□□□□ -2.05
SMD1YGR074W ROX1P25042 368 aa2.23□□□□□ -2.05
SMD1YGR074W CDC60P26637 1090 aaKnown RBP2.23□□□□□ -2.05
SMD1YGR074W GPI10P30777 616 aa2.23□□□□□ -2.05
SMD1YGR074W YKL100CP34248 587 aa2.23□□□□□ -2.05
SMD1YGR074W CMC1P36064 111 aa2.23□□□□□ -2.05
SMD1YGR074W PXL1P36166 706 aa2.23□□□□□ -2.05
SMD1YGR074W TSC10P38342 320 aa2.23□□□□□ -2.05
SMD1YGR074W SRP72P38688 640 aaKnown RBP2.23□□□□□ -2.05
SMD1YGR074W ERV46P39727 415 aa2.23□□□□□ -2.05
SMD1YGR074W TPA1P40032 644 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 80.4 ms