RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W UTH1P36135 365 aa5.05□□□□□ -1.6
RPN12YFR052W MSR1P38714 643 aa5.05□□□□□ -1.6
RPN12YFR052W GND1P38720 489 aaKnown RBP5.05□□□□□ -1.6
RPN12YFR052W LRP1P38801 184 aaKnown RBP5.05□□□□□ -1.6
RPN12YFR052W YHR219WP38900 624 aa5.05□□□□□ -1.6
RPN12YFR052W YJL070CP40361 888 aa5.05□□□□□ -1.6
RPN12YFR052W DPH1P40487 425 aaKnown RBP5.05□□□□□ -1.6
RPN12YFR052W YNL143CP53908 130 aa5.05□□□□□ -1.6
RPN12YFR052W MET14Q02196 202 aa5.05□□□□□ -1.6
RPN12YFR052W HAS1Q03532 505 aaKnown RBP5.05□□□□□ -1.6
RPN12YFR052W RPN9Q04062 393 aaKnown RBP5.05□□□□□ -1.6
RPN12YFR052W GIC2Q06648 383 aa5.05□□□□□ -1.6
RPN12YFR052W ATG23Q06671 453 aa5.05□□□□□ -1.6
RPN12YFR052W RPL40AP0CH08 128 aaKnown RBP5.04□□□□□ -1.6
RPN12YFR052W RPL40BP0CH09 128 aaKnown RBP5.04□□□□□ -1.6
RPN12YFR052W SPT15P13393 240 aaKnown RBP5.04□□□□□ -1.6
RPN12YFR052W UBA1P22515 1024 aaKnown RBP5.04□□□□□ -1.6
RPN12YFR052W EMC1P25574 760 aa5.04□□□□□ -1.6
RPN12YFR052W URA7P28274 579 aaKnown RBP5.04□□□□□ -1.6
RPN12YFR052W BEM1P29366 551 aa5.04□□□□□ -1.6
RPN12YFR052W PLC1P32383 869 aa5.04□□□□□ -1.6
RPN12YFR052W IMP3P32899 183 aaPredicted RBP5.04□□□□□ -1.6
RPN12YFR052W UBC6P33296 250 aaPredicted RBP5.04□□□□□ -1.6
RPN12YFR052W RRP3P38712 501 aaKnown RBP5.04□□□□□ -1.6
RPN12YFR052W PCL10P53124 433 aa5.04□□□□□ -1.6
RPN12YFR052W SWC4P53201 476 aa5.04□□□□□ -1.6
RPN12YFR052W CPR6P53691 371 aaKnown RBP5.04□□□□□ -1.6
RPN12YFR052W EFM6P53970 246 aa5.04□□□□□ -1.6
RPN12YFR052W ARP4P80428 489 aa5.04□□□□□ -1.6
RPN12YFR052W YDR131CQ03899 556 aa5.04□□□□□ -1.6
RPN12YFR052W GSF2Q04697 403 aaKnown RBP5.04□□□□□ -1.6
RPN12YFR052W MCP2Q06567 569 aa5.04□□□□□ -1.6
RPN12YFR052W YFT2Q06676 274 aa5.04□□□□□ -1.6
RPN12YFR052W HOS1Q12214 470 aa5.04□□□□□ -1.6
RPN12YFR052W GLO4Q12320 285 aa5.04□□□□□ -1.6
RPN12YFR052W RMD5Q12508 421 aa5.04□□□□□ -1.6
RPN12YFR052W NOP14Q99207 810 aaKnown RBP5.04□□□□□ -1.6
RPN12YFR052W YOR338WQ99326 363 aa5.04□□□□□ -1.6
RPN12YFR052W RAD1P06777 1100 aa5.03□□□□□ -1.6
RPN12YFR052W TUB1P09733 447 aaKnown RBP5.03□□□□□ -1.6
RPN12YFR052W NSP1P14907 823 aaKnown RBP5.03□□□□□ -1.6
RPN12YFR052W HSP26P15992 214 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
RPN12YFR052W SNF5P18480 905 aa5.03□□□□□ -1.6
RPN12YFR052W URA10P30402 227 aa5.03□□□□□ -1.6
RPN12YFR052W SFP1P32432 683 aa5.03□□□□□ -1.6
RPN12YFR052W YEL043WP32618 956 aa5.03□□□□□ -1.6
RPN12YFR052W CTF13P35203 478 aa5.03□□□□□ -1.6
RPN12YFR052W MRP21P38175 177 aa5.03□□□□□ -1.6
RPN12YFR052W SRP72P38688 640 aaKnown RBP5.03□□□□□ -1.6
RPN12YFR052W PCL5P38794 229 aa5.03□□□□□ -1.6
RPN12YFR052W SEO1P39709 593 aa5.03□□□□□ -1.6
RPN12YFR052W IRR1P40541 1150 aa5.03□□□□□ -1.6
RPN12YFR052W INA22P40576 216 aa5.03□□□□□ -1.6
RPN12YFR052W CTK3P46963 296 aaPredicted RBP5.03□□□□□ -1.6
RPN12YFR052W RTA1P53047 317 aa5.03□□□□□ -1.6
RPN12YFR052W MAL13P53338 473 aa5.03□□□□□ -1.6
RPN12YFR052W COG6P53959 839 aa5.03□□□□□ -1.6
RPN12YFR052W YPL113CQ02961 396 aa5.03□□□□□ -1.6
RPN12YFR052W VPS60Q03390 229 aa5.03□□□□□ -1.6
RPN12YFR052W NHX1Q04121 633 aa5.03□□□□□ -1.6
RPN12YFR052W TRM8Q12009 286 aa5.03□□□□□ -1.6
RPN12YFR052W SMF3Q12078 473 aaPredicted RBP5.03□□□□□ -1.6
RPN12YFR052W UPC2Q12151 913 aa5.03□□□□□ -1.6
RPN12YFR052W RIO1Q12196 484 aaKnown RBP5.03□□□□□ -1.6
RPN12YFR052W BRR2P32639 2163 aaKnown RBP5.02□□□□□ -1.61
RPN12YFR052W COX3P00420 269 aa5.02□□□□□ -1.61
RPN12YFR052W GLN4P13188 809 aaKnown RBP5.02□□□□□ -1.61
RPN12YFR052W HEM15P16622 393 aa5.02□□□□□ -1.61
RPN12YFR052W YCR099CP25657 155 aa5.02□□□□□ -1.61
RPN12YFR052W RFA2P26754 273 aaKnown RBP5.02□□□□□ -1.61
RPN12YFR052W SMI1P32566 505 aa5.02□□□□□ -1.61
RPN12YFR052W SLD2P34252 453 aa5.02□□□□□ -1.61
RPN12YFR052W PEX5P35056 612 aa5.02□□□□□ -1.61
RPN12YFR052W LAS1P36146 502 aaPredicted RBP5.02□□□□□ -1.61
RPN12YFR052W LDB7P38210 180 aa5.02□□□□□ -1.61
RPN12YFR052W OLA1P38219 394 aaKnown RBP5.02□□□□□ -1.61
RPN12YFR052W LTP1P40347 161 aa5.02□□□□□ -1.61
RPN12YFR052W ALG8P40351 577 aa5.02□□□□□ -1.61
RPN12YFR052W YIL108WP40483 696 aaKnown RBP5.02□□□□□ -1.61
RPN12YFR052W DSN1P40568 576 aa5.02□□□□□ -1.61
RPN12YFR052W PXA1P41909 870 aa5.02□□□□□ -1.61
RPN12YFR052W CIS3P47001 227 aa5.02□□□□□ -1.61
RPN12YFR052W TY4A-JP47023 414 aa5.02□□□□□ -1.61
RPN12YFR052W ECL1P48235 211 aa5.02□□□□□ -1.61
RPN12YFR052W PRP31P49704 494 aaPredicted RBP5.02□□□□□ -1.61
RPN12YFR052W SUN4P53616 420 aa5.02□□□□□ -1.61
RPN12YFR052W RPL22BP56628 122 aaKnown RBP5.02□□□□□ -1.61
RPN12YFR052W OSH6Q02201 448 aa5.02□□□□□ -1.61
RPN12YFR052W ARX1Q03862 593 aaKnown RBP5.02□□□□□ -1.61
RPN12YFR052W EMI1Q04406 187 aa5.02□□□□□ -1.61
RPN12YFR052W ADE13Q05911 482 aaKnown RBP5.02□□□□□ -1.61
RPN12YFR052W CUE5Q08412 411 aaKnown RBP5.02□□□□□ -1.61
RPN12YFR052W RTT10Q08924 1013 aa5.02□□□□□ -1.61
RPN12YFR052W DFG16Q99234 619 aa5.02□□□□□ -1.61
RPN12YFR052W FLP1P03870 423 aa5.01□□□□□ -1.61
RPN12YFR052W PHO4P07270 312 aaKnown RBP5.01□□□□□ -1.61
RPN12YFR052W PET111P08468 800 aa5.01□□□□□ -1.61
RPN12YFR052W YKR104WP0CE69 306 aa5.01□□□□□ -1.61
RPN12YFR052W INO1P11986 533 aa5.01□□□□□ -1.61
RPN12YFR052W PEP5P12868 1029 aa5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 606.2 ms