RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W OGG1P53397 376 aaPredicted RBP3.84□□□□□ -1.79
TSR1YDL060W SPO1P53541 631 aa3.84□□□□□ -1.79
TSR1YDL060W WAR1Q03631 944 aa3.84□□□□□ -1.79
TSR1YDL060W KRE28Q04431 385 aa3.84□□□□□ -1.79
TSR1YDL060W RCO1Q04779 684 aa3.84□□□□□ -1.79
TSR1YDL060W LYS2P07702 1392 aa3.84□□□□□ -1.79
TSR1YDL060W NUP188P52593 1655 aaKnown RBP3.84□□□□□ -1.79
TSR1YDL060W DNF3Q12674 1656 aa3.84□□□□□ -1.79
TSR1YDL060W SIR3P06701 978 aa3.84□□□□□ -1.79
TSR1YDL060W KAR3P17119 729 aa3.84□□□□□ -1.79
TSR1YDL060W REC107P21651 314 aa3.84□□□□□ -1.79
TSR1YDL060W PEX1P24004 1043 aa3.84□□□□□ -1.79
TSR1YDL060W ERG6P25087 383 aaKnown RBP3.84□□□□□ -1.79
TSR1YDL060W RPS7AP26786 190 aaKnown RBP3.84□□□□□ -1.79
TSR1YDL060W PPZ2P33329 710 aa3.84□□□□□ -1.79
TSR1YDL060W LAS1P36146 502 aaPredicted RBP3.84□□□□□ -1.79
TSR1YDL060W APE3P37302 537 aaKnown RBP3.84□□□□□ -1.79
TSR1YDL060W UBP13P38187 747 aa3.84□□□□□ -1.79
TSR1YDL060W RTS1P38903 757 aa3.84□□□□□ -1.79
TSR1YDL060W SMF1P38925 575 aa3.84□□□□□ -1.79
TSR1YDL060W TIF4631P39935 952 aaKnown RBP3.84□□□□□ -1.79
TSR1YDL060W PIG2P40187 538 aa3.84□□□□□ -1.79
TSR1YDL060W SSU1P41930 458 aa3.84□□□□□ -1.79
TSR1YDL060W ZIM17P42844 174 aa3.84□□□□□ -1.79
TSR1YDL060W FYV8P46949 817 aaKnown RBP3.84□□□□□ -1.79
TSR1YDL060W VPS73P53142 486 aaKnown RBP3.84□□□□□ -1.79
TSR1YDL060W CSL4P53859 292 aaPredicted RBP3.84□□□□□ -1.79
TSR1YDL060W BNI5P53890 448 aaKnown RBP3.84□□□□□ -1.79
TSR1YDL060W YLR177WQ06251 628 aa3.84□□□□□ -1.79
TSR1YDL060W RPC40P07703 335 aaKnown RBP3.83□□□□□ -1.8
TSR1YDL060W GPA1P08539 472 aa3.83□□□□□ -1.8
TSR1YDL060W RPO41P13433 1351 aaKnown RBP3.83□□□□□ -1.8
TSR1YDL060W STE12P13574 688 aa3.83□□□□□ -1.8
TSR1YDL060W ERG8P24521 451 aa3.83□□□□□ -1.8
TSR1YDL060W CDC15P27636 974 aa3.83□□□□□ -1.8
TSR1YDL060W PDB1P32473 366 aaKnown RBP3.83□□□□□ -1.8
TSR1YDL060W ATO2P32907 282 aa3.83□□□□□ -1.8
TSR1YDL060W YPT7P32939 208 aa3.83□□□□□ -1.8
TSR1YDL060W PHO11P35842 467 aa3.83□□□□□ -1.8
TSR1YDL060W CDS1P38221 457 aa3.83□□□□□ -1.8
TSR1YDL060W PHO12P38693 467 aa3.83□□□□□ -1.8
TSR1YDL060W VFA1P40080 203 aa3.83□□□□□ -1.8
TSR1YDL060W PCL7P40186 285 aa3.83□□□□□ -1.8
TSR1YDL060W BNR1P40450 1375 aa3.83□□□□□ -1.8
TSR1YDL060W THI6P41835 540 aa3.83□□□□□ -1.8
TSR1YDL060W YRB1P41920 201 aaKnown RBP3.83□□□□□ -1.8
TSR1YDL060W YDL183CP48569 320 aa3.83□□□□□ -1.8
TSR1YDL060W ATG4P53867 494 aa3.83□□□□□ -1.8
TSR1YDL060W TRS31Q03337 283 aa3.83□□□□□ -1.8
TSR1YDL060W RSF1Q05043 376 aa3.83□□□□□ -1.8
TSR1YDL060W VAM6Q07468 1049 aa3.83□□□□□ -1.8
TSR1YDL060W YRF1-4O13559 1382 aa3.83□□□□□ -1.8
TSR1YDL060W ABF1P14164 731 aa3.83□□□□□ -1.8
TSR1YDL060W PWP1P21304 576 aaKnown RBP3.83□□□□□ -1.8
TSR1YDL060W SMI1P32566 505 aa3.83□□□□□ -1.8
TSR1YDL060W ALY1P36117 915 aa3.83□□□□□ -1.8
TSR1YDL060W ECM4P36156 370 aa3.83□□□□□ -1.8
TSR1YDL060W MET18P40469 1032 aa3.83□□□□□ -1.8
TSR1YDL060W SKP2P42843 763 aa3.83□□□□□ -1.8
TSR1YDL060W ZAP1P47043 880 aa3.83□□□□□ -1.8
TSR1YDL060W JJJ1P53863 590 aa3.83□□□□□ -1.8
TSR1YDL060W VPS64Q03944 604 aa3.83□□□□□ -1.8
TSR1YDL060W VBA4Q04602 768 aaKnown RBP3.83□□□□□ -1.8
TSR1YDL060W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
TSR1YDL060W ECM3Q99252 613 aa3.83□□□□□ -1.8
TSR1YDL060W ATP2P00830 511 aaKnown RBP3.82□□□□□ -1.8
TSR1YDL060W PET122P10355 254 aa3.82□□□□□ -1.8
TSR1YDL060W CLN1P20437 546 aa3.82□□□□□ -1.8
TSR1YDL060W PRE8P23639 250 aa3.82□□□□□ -1.8
TSR1YDL060W PIM1P36775 1133 aa3.82□□□□□ -1.8
TSR1YDL060W STB5P38699 743 aa3.82□□□□□ -1.8
TSR1YDL060W GND1P38720 489 aaKnown RBP3.82□□□□□ -1.8
TSR1YDL060W YER130CP39959 443 aa3.82□□□□□ -1.8
TSR1YDL060W RGI2P40188 164 aa3.82□□□□□ -1.8
TSR1YDL060W EFM4P40516 257 aa3.82□□□□□ -1.8
TSR1YDL060W NOP9P47077 666 aaKnown RBP3.82□□□□□ -1.8
TSR1YDL060W PPN1Q04119 674 aa3.82□□□□□ -1.8
TSR1YDL060W AIM6Q07716 390 aa3.82□□□□□ -1.8
TSR1YDL060W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
TSR1YDL060W CEX1Q12453 761 aa3.82□□□□□ -1.8
TSR1YDL060W RRP36Q12481 300 aaPredicted RBP3.82□□□□□ -1.8
TSR1YDL060W ISN1Q99312 450 aa3.82□□□□□ -1.8
TSR1YDL060W ERG20P08524 352 aaKnown RBP3.82□□□□□ -1.8
TSR1YDL060W PMR1P13586 950 aa3.82□□□□□ -1.8
TSR1YDL060W SPO11P23179 398 aa3.82□□□□□ -1.8
TSR1YDL060W CLB3P24870 427 aa3.82□□□□□ -1.8
TSR1YDL060W POL4P25615 582 aa3.82□□□□□ -1.8
TSR1YDL060W KAR9P32526 644 aa3.82□□□□□ -1.8
TSR1YDL060W TFB1P32776 642 aa3.82□□□□□ -1.8
TSR1YDL060W CSE1P33307 960 aa3.82□□□□□ -1.8
TSR1YDL060W UIP5P36137 443 aa3.82□□□□□ -1.8
TSR1YDL060W TOM71P38825 639 aaKnown RBP3.82□□□□□ -1.8
TSR1YDL060W GET2P40056 285 aa3.82□□□□□ -1.8
TSR1YDL060W BIT61P47041 543 aa3.82□□□□□ -1.8
TSR1YDL060W AAD10P47182 288 aa3.82□□□□□ -1.8
TSR1YDL060W GLO1P50107 326 aa3.82□□□□□ -1.8
TSR1YDL060W TAM41P53230 385 aa3.82□□□□□ -1.8
TSR1YDL060W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
TSR1YDL060W YML122CQ03207 126 aa3.82□□□□□ -1.8
TSR1YDL060W NGL2Q03264 515 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms