RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	RSM28	Q03430	361 aa		1.7	□□□□□ -2.14
HMRA2	YCR096C	IWR1	Q07532	353 aa	Predicted RBP	1.7	□□□□□ -2.14
HMRA2	YCR096C	PDH1	Q12428	516 aa	Known RBP	1.7	□□□□□ -2.14
HMRA2	YCR096C	SSB1	P11484	613 aa	Known RBP	1.69	□□□□□ -2.14
HMRA2	YCR096C	SEC62	P21825	274 aa		1.69	□□□□□ -2.14
HMRA2	YCR096C	RER1	P25560	188 aa		1.69	□□□□□ -2.14
HMRA2	YCR096C	SIP2	P34164	415 aa	Known RBP	1.69	□□□□□ -2.14
HMRA2	YCR096C	YNK1	P36010	153 aa	Known RBP	1.69	□□□□□ -2.14
HMRA2	YCR096C	ARP1	P38696	384 aa		1.69	□□□□□ -2.14
HMRA2	YCR096C	SSB2	P40150	613 aa	Known RBP	1.69	□□□□□ -2.14
HMRA2	YCR096C	SOL4	P53315	255 aa		1.69	□□□□□ -2.14
HMRA2	YCR096C	HNT3	Q08702	217 aa		1.69	□□□□□ -2.14
HMRA2	YCR096C	YOL114C	Q12322	202 aa		1.69	□□□□□ -2.14
HMRA2	YCR096C	ARP6	Q12509	438 aa		1.69	□□□□□ -2.14
HMRA2	YCR096C	MRC1	P25588	1096 aa		1.68	□□□□□ -2.14
HMRA2	YCR096C	AAP1	P37898	856 aa	Known RBP	1.68	□□□□□ -2.14
HMRA2	YCR096C	YTA12	P40341	825 aa		1.68	□□□□□ -2.14
HMRA2	YCR096C	YIL161W	P40449	235 aa	Known RBP	1.68	□□□□□ -2.14
HMRA2	YCR096C	YGL082W	P53155	381 aa		1.68	□□□□□ -2.14
HMRA2	YCR096C	PEX8	P53248	589 aa		1.68	□□□□□ -2.14
HMRA2	YCR096C	YMR087W	Q04299	284 aa		1.68	□□□□□ -2.14
HMRA2	YCR096C	HRT3	Q12347	344 aa		1.68	□□□□□ -2.14
HMRA2	YCR096C	SPT15	P13393	240 aa	Known RBP	1.67	□□□□□ -2.14
HMRA2	YCR096C	TYR1	P20049	452 aa		1.67	□□□□□ -2.14
HMRA2	YCR096C	ESL2	P36168	1195 aa		1.67	□□□□□ -2.14
HMRA2	YCR096C	GEX2	P36173	615 aa		1.67	□□□□□ -2.14
HMRA2	YCR096C	YBR138C	P38277	524 aa		1.67	□□□□□ -2.14
HMRA2	YCR096C	SPC72	P39723	622 aa		1.67	□□□□□ -2.14
HMRA2	YCR096C	HIM1	Q06674	414 aa		1.67	□□□□□ -2.14
HMRA2	YCR096C	RRG7	Q08774	242 aa	Predicted RBP	1.67	□□□□□ -2.14
HMRA2	YCR096C	ATP2	P00830	511 aa	Known RBP	1.66	□□□□□ -2.14
HMRA2	YCR096C	DEG1	P31115	442 aa	Known RBP	1.66	□□□□□ -2.14
HMRA2	YCR096C	SAC6	P32599	642 aa	Known RBP	1.66	□□□□□ -2.14
HMRA2	YCR096C	MIA40	P36046	403 aa		1.66	□□□□□ -2.14
HMRA2	YCR096C	APM3	P38153	483 aa		1.66	□□□□□ -2.14
HMRA2	YCR096C	YGR210C	P42942	411 aa		1.66	□□□□□ -2.14
HMRA2	YCR096C	MSO1	P53604	210 aa	Known RBP	1.66	□□□□□ -2.14
HMRA2	YCR096C	ADE13	Q05911	482 aa	Known RBP	1.66	□□□□□ -2.14
HMRA2	YCR096C	ATG26	Q06321	1198 aa		1.66	□□□□□ -2.14
HMRA2	YCR096C	BRE1	Q07457	700 aa	Known RBP	1.66	□□□□□ -2.14
HMRA2	YCR096C	TMS1	Q12116	473 aa		1.66	□□□□□ -2.14
HMRA2	YCR096C	MSS18	P08593	268 aa		1.65	□□□□□ -2.15
HMRA2	YCR096C	SNF3	P10870	884 aa		1.65	□□□□□ -2.15
HMRA2	YCR096C	CLN3	P13365	580 aa		1.65	□□□□□ -2.15
HMRA2	YCR096C	LCB1	P25045	558 aa	Known RBP	1.65	□□□□□ -2.15
HMRA2	YCR096C	VPS17	P32913	551 aa		1.65	□□□□□ -2.15
HMRA2	YCR096C	ECM15	P35195	104 aa		1.65	□□□□□ -2.15
HMRA2	YCR096C	TUL1	P36096	758 aa		1.65	□□□□□ -2.15
HMRA2	YCR096C	ANS1	P38832	159 aa		1.65	□□□□□ -2.15
HMRA2	YCR096C	NPR2	P39923	615 aa		1.65	□□□□□ -2.15
HMRA2	YCR096C	TEP1	P53916	434 aa		1.65	□□□□□ -2.15
HMRA2	YCR096C	MET14	Q02196	202 aa		1.65	□□□□□ -2.15
HMRA2	YCR096C	DIC1	Q06143	298 aa		1.65	□□□□□ -2.15
HMRA2	YCR096C	CSR1	Q06705	408 aa	Known RBP	1.65	□□□□□ -2.15
HMRA2	YCR096C	GAL1	P04385	528 aa		1.64	□□□□□ -2.15
HMRA2	YCR096C	SST2	P11972	698 aa	Known RBP	1.64	□□□□□ -2.15
HMRA2	YCR096C	FUN19	P28003	413 aa	Predicted RBP	1.64	□□□□□ -2.15
HMRA2	YCR096C	NUP120	P35729	1037 aa		1.64	□□□□□ -2.15
HMRA2	YCR096C	SAM50	P53969	484 aa		1.64	□□□□□ -2.15
HMRA2	YCR096C	EIS1	Q05050	843 aa	Known RBP	1.64	□□□□□ -2.15
HMRA2	YCR096C	SSK1	Q07084	712 aa		1.64	□□□□□ -2.15
HMRA2	YCR096C	THI20	Q08224	551 aa		1.64	□□□□□ -2.15
HMRA2	YCR096C	RBD2	Q12270	262 aa		1.64	□□□□□ -2.15
HMRA2	YCR096C	MIS1	P09440	975 aa	Known RBP	1.63	□□□□□ -2.15
HMRA2	YCR096C	SPO16	P17122	198 aa		1.63	□□□□□ -2.15
HMRA2	YCR096C	YCR022C	P25620	114 aa		1.63	□□□□□ -2.15
HMRA2	YCR096C	PMU1	P36069	295 aa		1.63	□□□□□ -2.15
HMRA2	YCR096C	FSH1	P38777	243 aa	Known RBP	1.63	□□□□□ -2.15
HMRA2	YCR096C	NDT80	P38830	627 aa		1.63	□□□□□ -2.15
HMRA2	YCR096C	VPS52	P39904	641 aa		1.63	□□□□□ -2.15
HMRA2	YCR096C	HIS6	P40545	261 aa		1.63	□□□□□ -2.15
HMRA2	YCR096C	IMA1	P53051	589 aa		1.63	□□□□□ -2.15
HMRA2	YCR096C	CPR6	P53691	371 aa	Known RBP	1.63	□□□□□ -2.15
HMRA2	YCR096C	PCD1	Q12524	340 aa		1.63	□□□□□ -2.15
HMRA2	YCR096C	PIF1	P07271	859 aa		1.62	□□□□□ -2.15
HMRA2	YCR096C	BIK1	P11709	440 aa		1.62	□□□□□ -2.15
HMRA2	YCR096C	APA1	P16550	321 aa	Known RBP	1.62	□□□□□ -2.15
HMRA2	YCR096C	NCP1	P16603	691 aa	Known RBP	1.62	□□□□□ -2.15
HMRA2	YCR096C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	1.62	□□□□□ -2.15	not detected
HMRA2	YCR096C	YBL059W	P34224	193 aa		1.62	□□□□□ -2.15
HMRA2	YCR096C	ROT2	P38138	954 aa		1.62	□□□□□ -2.15
HMRA2	YCR096C	CTF18	P49956	741 aa		1.62	□□□□□ -2.15
HMRA2	YCR096C	RLI1	Q03195	608 aa	Known RBP	1.62	□□□□□ -2.15
HMRA2	YCR096C	VAM6	Q07468	1049 aa		1.62	□□□□□ -2.15
HMRA2	YCR096C	YOL057W	Q08225	711 aa		1.62	□□□□□ -2.15
HMRA2	YCR096C	TMA7	Q3E764	64 aa	Known RBP	1.62	□□□□□ -2.15
HMRA2	YCR096C	ATR1	P13090	542 aa		1.61	□□□□□ -2.15
HMRA2	YCR096C	PGS1	P25578	521 aa		1.61	□□□□□ -2.15
HMRA2	YCR096C	CMK1	P27466	446 aa	Known RBP	1.61	□□□□□ -2.15
HMRA2	YCR096C	UTH1	P36135	365 aa		1.61	□□□□□ -2.15
HMRA2	YCR096C	UBA4	P38820	440 aa		1.61	□□□□□ -2.15
HMRA2	YCR096C	PUG1	P40100	303 aa		1.61	□□□□□ -2.15
HMRA2	YCR096C	SNG1	P46950	547 aa		1.61	□□□□□ -2.15
HMRA2	YCR096C	STR3	P53101	465 aa	Known RBP	1.61	□□□□□ -2.15
HMRA2	YCR096C	TRS130	Q03660	1102 aa		1.61	□□□□□ -2.15
HMRA2	YCR096C	MLC2	Q06580	163 aa		1.61	□□□□□ -2.15
HMRA2	YCR096C	TMA16	Q08687	178 aa		1.61	□□□□□ -2.15
HMRA2	YCR096C	ADH2	P00331	348 aa	Known RBP	1.6	□□□□□ -2.15
HMRA2	YCR096C	CLB4	P24871	460 aa		1.6	□□□□□ -2.15
HMRA2	YCR096C	SNC1	P31109	117 aa		1.6	□□□□□ -2.15

Retrieved 100 of 5,963 RNA–protein pairs in 51.7 ms